Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06]
79,302 sequences; 522,653,749 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq72241 181 3e-40
seq53817 176 1e-38
seq65811 172 1e-37
seq73807 168 2e-36
seq42370 167 6e-36
seq55661 145 2e-29
seq25273 145 2e-29
seq71687 141 2e-28
seq67817 134 3e-26
seq64144 131 4e-25
seq73986 96.9 8e-15
seq65142 89.7 1e-12
>seq72241
Length=55963
Score = 181 bits (200), Expect = 3e-40
Identities = 169/215 (79%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || |||||||| ||||| ||||| ||||| || ||||||||||| || ||
Sbjct 40399 CAAATTTTTGTCAAAACTCTAACAGGCAAAACCATCACTCTTGAGGTGGAAAGTTCTGAT 40340
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || ||||||||| || || |||||||| ||||| || |||||
Sbjct 40339 ACTATTGACAACGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCTGATCAGCAG 40280
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || |||||||| || ||||| ||||| || || || ||||| ||||| || |
Sbjct 40279 CGCCTAATTTTCGCCGGGAAGCAGCTGGAAGACGGTAGAACCCTTGCGGATTACAATATT 40220
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|| || || ||||| || |||||||| ||||| ||
Sbjct 40219 CAGAAGGAGTCAACCCTACATCTTGTCTTGAGGCT 40185
Score = 170 bits (188), Expect = 5e-37
Identities = 179/234 (76%), Gaps = 1/234 (0%)
Strand=Plus/Minus
Query 177907 GTAAGGTTAA-AATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTC 177965
|| |||| || || | | || || ||||||||||| || || || || || || |||||
Sbjct 40873 GTTAGGTAAAGAAAGATGCAGATCTTCGTGAAAACCCTAACCGGTAAGACAATTACCCTT 40814
Query 177966 GAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGA 178025
||||| || ||||| || || ||||| || ||||| |||||||| ||||| || |||
Sbjct 40813 GAGGTCGAGAGCTCCGATACAATCGACAATGTCAAGGCTAAGATTCAAGACAAGGAGGGA 40754
Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085
|||||||| || ||||| || || ||||||||||| ||||| ||||| || || | ||
Sbjct 40753 ATCCCTCCCGATCAGCAGCGCCTAATCTTCGCCGGCAAACAACTCGAGGACGGCCGAACC 40694
Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| ||||||||||| |||| || || || || || |||||||| | ||||||
Sbjct 40693 CTCGCCGATTATAATATCCAGAAGGAGTCTACTCTCCATCTTGTCCTCAGACTC 40640
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || |||||||| || || || ||||| || || || || || || || ||
Sbjct 40627 CAGATATTTGTTAAAACTCTGACCGGCAAGACGATTACTCTTGAAGTTGAGAGTTCCGAT 40568
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| ||||||||||| || || ||||| |||||||| |||||
Sbjct 40567 ACAATTGACAACGTCAAGGCCAAGATTCAGGATAAGGAGGGAATTCCTCCGGATCAGCAG 40508
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| |||||||||||||| || ||| | || || || |||||||| |||||||| || ||
Sbjct 40507 AGGCTTATCTTCGCCGGGAAGCAGTTGGAGGACGGCAGGACTCTCGCCGATTACAATATC 40448
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||||| ||||| || || ||||| || ||||| |||
Sbjct 40447 CAAAAGGAATCTACTCTTCATCTCGTCTTGAGGCTC 40412
Score = 163 bits (180), Expect = 7e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || || || || || ||||| || || || ||||| ||||| || ||
Sbjct 40171 CAGATTTTTGTCAAGACCCTTACTGGTAAAACTATTACTCTTGAGGTTGAAAGTTCTGAT 40112
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| |||||||||||| |||||||| || |||||||| || |||
Sbjct 40111 ACCATCGATAATGTCAAGGCAAAGATTCAGGATAAAGAAGGGATTCCTCCGGATCAACAA 40052
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| ||||| || ||| | ||||| || | ||||| || ||||||||| |
Sbjct 40051 AGACTGATCTTTGCCGGGAAGCAGTTGGAAGACGGTCGTACTCTAGCTGATTATAACATT 39992
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
||||| || || || || ||||| || ||| | || ||
Sbjct 39991 CAAAAGGAGTCCACTCTTCATCTGGTGTTGCGTCTGAG 39954
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | || || || ||||| || | ||||| || || |||||
Sbjct 39943 CAGATATTTGTGAAGACATTGACTGGGAAGACGATTACGTTAGAGGTTGAGAGTTCAGAT 39884
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||||||||||||||| ||||| || ||||| |||||
Sbjct 39883 ACCATAGATAATGTGAAGACCAAGATTCAGGACAAAGAGGGAATTCCCCCGGATCAGCAG 39824
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| ||||| ||||| ||||| ||||| |||||||| | ||||| || ||||| || ||
Sbjct 39823 AGGCTTATATTCGCTGGAAAGCAGCTTGAAGATGGGCGTACTCTGGCTGATTACAATATC 39764
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| |||||
Sbjct 39763 CAGAAGGAGTCCACCCTGCACCTTGT 39738
>seq53817
Length=15024
Score = 176 bits (194), Expect = 1e-38
Identities = 169/216 (78%), Gaps = 3/216 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || ||||||||||| ||||| || || || |||||||| ||||| |||
Sbjct 3859 AAAATGC---AGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTTGAGGTCGAA 3803
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| || ||||| || || ||||| || ||||||||||| || || ||||| |||
Sbjct 3802 TCCTCGGATACCATTGACAATGTCAAGGCCAAAATTCAGGACAAGGAGGGCATCCCACCG 3743
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|||||||| || || ||||||||||| || ||||||||||| || || ||||| || ||
Sbjct 3742 GACCAGCAGCGTCTCATCTTCGCCGGTAAGCAGCTCGAAGACGGCAGAACTCTAGCTGAC 3683
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130
|| ||| |||| || ||||| || || || ||||||
Sbjct 3682 TACAACATCCAGAAGGAATCCACCCTTCACCTTGTT 3647
>seq65811
Length=66007
Score = 172 bits (190), Expect = 1e-37
Identities = 162/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || ||||| || ||||| ||||| || || ||||| |||
Sbjct 55460 CAGATCTTCGTTAAGACTCTTACCGGAAAGACCATCACTCTCGAAGTCGAGAGCTCCGAC 55401
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||| ||||| || || ||||| ||||| |||||||||
Sbjct 55400 ACCATCGATAACGTCAAGGCAAAGATCCAGGATAAGGAGGGAATTCCTCCAGACCAGCAA 55341
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| |||||||| |||||||| || || || || ||||| ||||| ||| |
Sbjct 55340 AGGCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTTGCGGATTACAACATT 55281
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 55280 CAAAAGGAGTCTACCCTCCA-CTTG 55257
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | || || || || |||||||| |||||||| ||||| |||
Sbjct 54577 CAGATCTTTGTGAAGACCTTGACCGGTAAGACTATCACCCTGGAGGTGGAGAGCTCTGAC 54518
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||| || || ||||| || ||||| || || ||||||||
Sbjct 54517 ACCATTGACAATGTGAAGGCAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAGCAG 54458
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | ||||| || || || ||||| ||||||||||||||| | || || || || ||
Sbjct 54457 AGGTTGATCTTTGCTGGTAAGCAGCTGGAAGATGGAAGGACTTTGGCTGACTACAATATC 54398
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || |||||||| ||||||||
Sbjct 54397 CAGAAGGAGTCAACACTCCATCTTGT 54372
Score = 136 bits (150), Expect = 1e-26
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || ||||| || ||||| ||||| || || ||||| |||
Sbjct 55232 CAAATCTTTGTCAAGACCTTGACCGGAAAGACCATCACGCTCGAAGTTGAGAGCTCCGAC 55173
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || || ||||| ||||| ||||| || || || |||||||||
Sbjct 55172 ACCATCGACAACGTAAAGGCTAAAATTCAAGACAAGGAAGGCATTCCACCAGACCAGCAA 55113
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||||||||| || |||||||| || || | || | ||||| || || |
Sbjct 55112 AGATTGATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGCACCTTGGCCGACTACAATATT 55053
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| || || || ||||
Sbjct 55052 CAAAAGGAATCCACCCTTCA-CTTG 55029
>seq73807
Length=69832
Score = 168 bits (186), Expect = 2e-36
Identities = 163/208 (78%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||| || || ||||| || || ||||| | |||||||| ||||||||
Sbjct 38923 CAAATTTTCGTGAAGACACTTACAGGGAAGACAATCACTTTGGAGGTGGAGAGCTCAGAT 38864
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| ||| ||||||||||| |||||||| ||||| || || ||
Sbjct 38863 ACTATTGATAATGTGAAAGCAAAAATTCAGGACAAGGAAGGAATTCCTCCAGATCAACAG 38804
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| |||||||| || || || |||||||| ||||| ||||| ||||| || ||||| ||
Sbjct 38803 AGGCTTATCTTTGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTGCGGACTATAATATC 38744
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || || || ||||| |||| ||
Sbjct 38743 CAGAAGGAGTCCACCCTGCA-CTTGGTT 38717
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || |||||||| || |||||||| || || ||||||||||||
Sbjct 39835 CAAATCTTTGTTAAGACCCTGACAGGAAAGACCATCACCCTTGAAGTTGAAAGCTCAGAC 39776
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || |||||| || || |||||||| || ||||| || || |||||||||
Sbjct 39775 ACAATTGACAATGTCAAAGCCAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCAA 39716
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || ||||| || || ||||| | || ||||| || || ||| |
Sbjct 39715 AGATTGATTTTCGCAGGGAAACAACTGGAGGATGGCCGTACCCTTGCAGACTACAACATA 39656
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||||| || || || || |||||||| ||||||||
Sbjct 39655 CAAAAGGAGTCCACCCTCCATCTTGTCTTGAGACT 39621
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || |||||||| || |||||||| || || ||||||||||||
Sbjct 39607 CAAATCTTCGTTAAGACCCTGACAGGAAAGACCATCACCCTGGAAGTCGAAAGCTCAGAC 39548
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || |||||| || ||||||||||| || ||||| || || || ||||||
Sbjct 39547 ACAATTGACAATGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGATCAGCAA 39488
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || |||||||| || ||||| | || ||||| || || || |
Sbjct 39487 CGTTTGATTTTTGCTGGGAAACAGCTTGAGGATGGCCGTACCCTTGCAGACTACAATATT 39428
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||||| || || || || || ||||||||| |||||
Sbjct 39427 CAAAAGGAGTCCACCCTTCACCTTGTTTTGCGACTC 39392
Score = 163 bits (180), Expect = 7e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || | ||||| || || |||||||| ||
Sbjct 39151 CAGATCTTTGTCAAGACTCTTACTGGGAAGACCGTTACCCTAGAAGTAGAAAGCTCTGAT 39092
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| || |||||||| ||||||||||| || || || ||||||||
Sbjct 39091 ACGATTGATAACGTTAAGGCTAAGATTCAAGACAAAGAAGGCATTCCCCCTGACCAGCAG 39032
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || ||||| |||||||| || ||||| ||||| ||||| ||||||||| ||
Sbjct 39031 CGTCTGATATTTGCCGGTAAACAGCTTGAGGATGGTAGGACACTTGCTGATTATAACATC 38972
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||| || ||||| |||||| | || |||
Sbjct 38971 CAAAAGGAGTCAACTCTGCATTTGGTGTTG 38942
Score = 159 bits (176), Expect = 8e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| |||||||| || || ||||| || || ||||||||||||
Sbjct 39379 CAGATCTTTGTCAAGACTCTGACAGGAAAGACCATTACCCTTGAAGTTGAAAGCTCAGAC 39320
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| ||| || ||||||||||| || ||||| || || |||||||||
Sbjct 39319 ACAATTGACAACGTTAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCAGACCAGCAA 39260
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || || || || ||||| || || ||||| | || || || || || || ||
Sbjct 39259 CGCTTGATTTTTGCAGGGAAACAACTTGAGGATGGCCGTACCCTGGCAGACTACAATATC 39200
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
||||| || || ||||| || ||||| |||||||||
Sbjct 39199 CAAAAGGAGTCCACACTTCACCTTGTCTTGAGACTC 39164
>seq42370
Length=41228
Score = 167 bits (184), Expect = 6e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || ||||| || || ||||| ||||| || |||||||| || || || |||
Sbjct 9981 CAGATATTTGTTAAAACCCTAACCGGAAAGACGATTACTCTCGAGGTTGAGAGTTCCGAC 10040
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| || |||||||| || ||||| ||||||||||||||||||
Sbjct 10041 ACTATTGACAACGTCAAGGCTAAAATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAA 10100
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| || || || || | || ||||| |||||||||||||||| || |
Sbjct 10101 AGGCTCATCTTTGCTGGGAAGCAATTGGAGGATGGCCGGACTCTTGCCGATTACAATATT 10160
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
|||||||| || || || ||||| || ||||| ||
Sbjct 10161 CAAAAAGAGTCGACCCTTCATCTCGTCTTGAGGCT 10195
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || ||||| || || || || |||||||| || || || ||
Sbjct 9753 CAGATCTTCGTGAAAACCCTAACAGGCAAGACCATAACTCTCGAGGTTGAGAGTTCCGAT 9812
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || || || || || ||||||||||| |||||
Sbjct 9813 ACTATTGATAATGTCAAGGCTAAGATCCAAGATAAGGAGGGTATCCCTCCGGATCAGCAG 9872
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||||||||| ||||| | || || || | || || |||||||||||| |
Sbjct 9873 CGCCTTATCTTCGCCGGCAAACAATTGGAGGACGGCCGAACCCTAGCCGATTATAACATA 9932
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || |||||||| || |||||||||
Sbjct 9933 CAGAAGGAATCAACCCTTCATCTTGTT 9959
Score = 156 bits (172), Expect = 1e-32
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || || ||||| || ||||| || || || ||||| ||||| || ||
Sbjct 10437 CAGATTTTTGTTAAGACCCTCACTGGTAAAACCATTACTCTTGAGGTTGAAAGTTCTGAT 10496
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || |||||||||||| || ||||| || ||||||||||||||
Sbjct 10497 ACAATTGATAATGTTAAGGCAAAGATTCAGGATAAGGAAGGGATTCCTCCGGACCAGCAG 10556
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| ||||| || ||| | |||||||| || ||||| || ||||||||| |
Sbjct 10557 AGATTGATCTTTGCCGGGAAGCAGTTGGAAGATGGCAGAACTCTAGCTGATTATAACATT 10616
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || || ||||| || || | || |||
Sbjct 10617 CAAAAGGAGTCCACCCTTCATCTGGTGCTGCGTCTGAGA 10655
>seq55661
Length=20824
Score = 145 bits (160), Expect = 2e-29
Identities = 163/216 (75%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || ||||||||||| |||| ||||| || |||||| | ||||| |||
Sbjct 2377 AAAATGC---AGATCTTCGTGAAAACCCTCATGGGAAAGACCATCACCTTTGAGGTCGAA 2433
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| || ||||| || || ||||| || ||||||||||| || | ||||| |||
Sbjct 2434 TCCTCCGATACCATTGACAATGTCAAGGCCAAAATTCAGGACAAGGAGAGCATCCCACCG 2493
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| || || |||||||||| || ||||||||||||| || || || || |
Sbjct 2494 GA-CAGCAGCGTCTCATCTTCGCCGAGAAGCAGCTCGAAGATGACAGAACACTAGCTAAC 2552
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130
|| ||| |||| || ||||| || || || ||||||
Sbjct 2553 TACAACATCCAGAAGGAATCCACCCTTCACCTTGTT 2588
>seq25273
Length=6599
Score = 145 bits (160), Expect = 2e-29
Identities = 162/216 (75%), Gaps = 3/216 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || ||||||||||| ||||| || || || |||||||| ||||| |||
Sbjct 183 AAAATGC---AGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTTGAGGTCGAA 239
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| || ||||| || || ||||| || |||||||| || || || ||||| |||
Sbjct 240 TCCTTCGATACCATTGACAATGTCAAGGCCAAAATTCAGGAGAAGGAGGGCATCCCACCG 299
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
||||||||||| || |||||| |||| || ||||||||||| | || || || | ||
Sbjct 300 GACCAGCAACGTCTCATCTTCTCCGGGAAGCAGCTCGAAGACAGCAGAACACTACCTGAC 359
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130
|| || |||| || ||||| || || || ||| ||
Sbjct 360 TACAATATCCAGAAGGAATCCACTCTTCACCTTATT 395
>seq71687
Length=64904
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||||||||| || || || || || || ||||||||||| ||| ||| ||
Sbjct 44909 CAGATCTTCGTGAAAACCCTGACGGGTAAGACCATTACCCTCGAGGTTGAATCCTCCGAT 44850
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||| || || || ||||| ||||| ||||| |||||
Sbjct 44849 ACCATTGACAATGTGAAGGCGAAGATCCAAGATAAGGAAGGCATCCCACCGGATCAGCAG 44790
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || ||||| ||||| || |||||||| || || ||||| | || ||||| ||| ||
Sbjct 44789 AGGCTCATCTTTGCCGGCAAGCAGCTCGAGGAAGGCAGGACCTTAGCGGATTACAACATC 44730
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || |||||||| || ||
Sbjct 44729 CAGAAGGAGTCGACACTGCACCTGGT 44704
>seq67817
Length=4127
Score = 134 bits (148), Expect = 3e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986
|| ||||||||||| ||||| || || || |||||||| ||||| ||| ||| | |||
Sbjct 1607 ATCTTCGTGAAAACCCTCACGGGGAAGACCATCACCCTTGAGGTCGAATCCTCCAATACC 1548
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
|| || || ||||| || ||| |||||| || || ||||| || |||||||| ||
Sbjct 1547 ATTGACAATGTCAAGGCCAAAATTTCGGACAAGGAGGGCATCCCACCAGACCAGCAGCGT 1488
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
|| ||||||||||| || || |||||||| || || || || || || ||| ||||
Sbjct 1487 CTCATCTTCGCCGGGAAGCAACTCGAAGACTACAGAACACTAGCTGACTACAACATCCAG 1428
Query 178107 AAAGAATCAACACTGCATCTTGTT 178130
|| ||||| || | || ||||||
Sbjct 1427 AAGGAATCCACCATTCACCTTGTT 1404
>seq64144
Length=11632
Score = 131 bits (144), Expect = 4e-25
Identities = 159/216 (74%), Gaps = 3/216 (1%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || ||||||||||| ||||| || || || ||||| || ||||| |||
Sbjct 9323 AAAATGC---AGATCTTCGTGAAAACCCTCACGGGGAAGACCATCACTCTTGAGGTTGAA 9267
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| || ||||| || || ||||| || ||| |||||| || || ||||| |
Sbjct 9266 TCCTCCGATACCATTGACAATGTCAAGGCCAAAATTTCGGACAAGGACGGCATCCCACTA 9207
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|||||||| || || |||||||||| || || |||||||| | || || || || ||
Sbjct 9206 GACCAGCAGCGTCTCCTCTTCGCCGGGAAGCAACTCGAAGACAGCAGAACACTAGCTGAC 9147
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130
|| ||| |||| || ||||| || || | ||||||
Sbjct 9146 TACAACATCCATAAGGAATCCACCCTTTACCTTGTT 9111
>seq73986
Length=64159
Score = 96.9 bits (106), Expect = 8e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 178010 TCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCT 178069
|||||| |||||||| || ||||| || ||||| |||| || || || || || || |
Sbjct 17175 TCAGGATAAAGAAGGTATTCCTCCCGATCAGCAGAGACTGATTTTTGCTGGTAAGCAATT 17116
Query 178070 CGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|||||||| | ||| | || || ||||| |||| |||||||||||||| || | ||
Sbjct 17115 GGAAGATGGCCGTACTTTGGCTGACTATAATATCCAGAAAGAATCAACACTTCACTTGGT 17056
Query 178130 TTTGAGACTCAGA 178142
|||||| || |||
Sbjct 17055 TTTGAGGCTTAGA 17043
>seq65142
Length=25918
Score = 89.7 bits (98), Expect = 1e-12
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||||||||| ||||||||||| | || || ||||||||||||||| | || ||||| |
Sbjct 4954 AGGAATCCCACCGGACCAGCAGAGGCTAATTTTCGCCGGAAAACAGTTGGAGGATGGCCG 4895
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||||||| || |||||| |||| ||||
Sbjct 4894 AACTCTTGCTGACTATAACATCCAGAAAG 4866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202508140638588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |