Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq208 104 2e-17 seq14 100 2e-16 seq2764 95.1 9e-15 >seq208 Length=512674 Score = 104 bits (114), Expect = 2e-17 Identities = 80/95 (84%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || | ||||| |||| ||||||||||||||||||||| || Sbjct 93765 ACATGAGCAATCATGCATGTCAGAAGAGCATAGGAAGCAATGTTAAATGGCACTCCCAAG 93824 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGA 101850 ||||| ||||| || | ||||||| |||||| || Sbjct 93825 CCCATGTCAGCAGAACGCTGATACATTTGACATGA 93859 >seq14 Length=892207 Score = 100 bits (110), Expect = 2e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || | ||||| |||| ||||||||||||||||||||| || Sbjct 889708 ACATGAGCAATCATGCATGTCAGAAGAGCATAGGAAGCAATGTTAAATGGCACTCCCAAG 889649 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGA 101850 ||||| ||||| || | ||||||| ||| || || Sbjct 889648 CCCATGTCAGCAGAACGCTGATACATTTGGCATGA 889614 >seq2764 Length=148376 Score = 95.1 bits (104), Expect = 9e-15 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 ||||||||||||||||| || | ||||| |||| ||||||||||||||||||||| || Sbjct 73496 ACATGAGCAATCATGCATGTCAGAAGAGCATAGGAAGCAATGTTAAATGGCACTCCCAAG 73437 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGA 101850 ||||| ||||| || ||||||| ||| || || Sbjct 73436 CCCATGTCAGCAGAATGCTGATACATTTGGCATGA 73402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361179404372057