Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq1633 118 2e-21 >seq1633 Length=412253 Score = 118 bits (130), Expect = 2e-21 Identities = 244/358 (68%), Gaps = 10/358 (3%) Strand=Plus/Minus Query 211615 TGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAAC---ATGCTTTATCGTA 211671 |||||||||||| | |||||||| | | | ||||||| | || ||||||| Sbjct 238502 TGGTTTGGTGTTTTGATGATCCCTACTTTATTGACTGCAACTTCTGTATTTATTATCGTT 238443 Query 211672 GCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTCA 211731 | |||| || | ||| | | ||||| ||||| || |||||||| || | | || Sbjct 238442 G---TCATTGCTACTCCTTCAATAGATATTGACGGTATTCGTGAACCTGTTTCCAGGTCT 238386 Query 211732 TTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGT 211791 | | ||||| |||| || || |||||||| || |||| |||| || || ||| Sbjct 238385 CTATTTTATGGAAACAGTATTATTTCTGGTGCCATTATTCCTACTTCTGTAGCTATAGGT 238326 Query 211792 TTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGGT 211851 || | ||| || || | || ||||| || | ||| ||| ||| | |||||||| || Sbjct 238325 TTGCGCTTTTACCCGAGATGAGAAGCGGCGTCCGTTGCTGAATGGTTATACAATGGCAGT 238266 Query 211852 CCTTACCAGTTGGTAATCTTCCAC-TTCCTTA-TCGGAATCTCAGCATACATGGGAAGAC 211909 |||||| || | | | ||| || || ||| | || | | |||||||| | Sbjct 238265 CCTTACGAGCT--AATTGTTCTACATTTGTTACTTGGCGTAGCTTGTTACATGGGCCGTA 238208 Query 211910 AGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGC 211967 ||||||||||| | |||||| |||||||| |||||||| |||||| |||||||| Sbjct 238207 AGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGC 238150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807390589966920