Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq2265 403 2e-107 >seq2265 Length=185284 Score = 403 bits (446), Expect = 2e-107 Identities = 576/805 (72%), Gaps = 7/805 (1%) Strand=Plus/Plus Query 163837 CATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCA 163895 |||||| || || || || ||||||||||| || || || ||||| || ||| || Sbjct 94268 CATTCT-TTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCA 94326 Query 163896 ACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCAT 163955 | | || || || |||| |||||| || || ||||| | || | || || |||||||| Sbjct 94327 ATTAGGTGGTCTGTGGACTTTTGTTGCTCTACACGGCACTTTCGGACTAATAGGTTTCAT 94386 Query 163956 GCTTCGGCAATTTGAACTTGCTCGCCTGATTGGAATCAGACCCTACAATGCGATTGCTTT 164015 ||| || ||||||||||||||||| | || | || |||| || ||||| || | || Sbjct 94387 GCTACGTCAATTTGAACTTGCTCGATTTGTTCAATTC-GACCTTATAATGCAATCACATT 94445 Query 164016 CTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAG 164075 ||||| ||| ||||| || || ||| ||| || || || || || |||||||| || | Sbjct 94446 CTCTGTTCCAATTGCAGTTTTTGTTTCTGTATTCCTGATTTATCCACTGGGTCAGTCTGG 94505 Query 164076 TTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCA 164135 ||||||||| || || |||||| || ||||| || || ||||| || | || | || Sbjct 94506 TTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCA 94565 Query 164136 AGGATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGG 164195 ||| |||||||| ||||| ||||| || || ||||| |||||||||| ||| || | || Sbjct 94566 AGGGTTTCATAATTGGACATTGAATCCATTTCATATAATGGGAGTTGACGGTGTATTGGG 94625 Query 164196 CGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGG 164255 || || | |||| |||||||| || | || || |||||||| || | ||||||||| Sbjct 94626 CGCTGCTCTTCTATGCGCTATTCATGGTGCTACTGTGGAAAATACTTTATTTGAAGATGG 94685 Query 164256 AGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTAT 164315 || ||||| || || | || ||| | | || || | |||| |||||||| || Sbjct 94686 TGATGGTGCAAATACATTCTATGCTTTTAACCCAACTCAAGCTAAAGAAACTTATTCAAT 94745 Query 164316 GGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTG 164375 ||||||||| |||||||| ||||| || || || || |||| ||||| || || || || Sbjct 94746 GGTCACTGCTAACCGCTTTTGGTCCCAAATATTTGGGATTGCTTTTTCCAATAAACGTTG 94805 Query 164376 GCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCAT 164435 | | ||||| || ||||| ||||| || || | ||| |||||| | || | || | Sbjct 94806 GTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGCGCTCTCGGAGT 94865 Query 164436 TATTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGC 164495 | || || ||||| || || ||||| || || || || ||| || ||| | ||||| Sbjct 94866 AGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGTGCAGC 94925 Query 164496 AGAAGATCCTGAGTTCGAGACTTTCTATACCAAGAACATCTTATTGAACGAAGGACTCCG 164555 ||||||| || || ||||||||||| ||||| || || |||| |||||||| | || Sbjct 94926 GAAAGATCCCGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCG 94985 Query 164556 TGCATGGTTAGCACCAGTTGACCAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTA 164613 | | ||| | || | || |||| || || ||| || | ||||| || || || Sbjct 94986 TCCTTGGATGGCGACTCAAGATCAGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTT 95043 Query 164614 CTGCCGAGAGGTAATGCGCTTTAAT 164638 ||||| | || || || ||||||| Sbjct 95044 CTGCCCCGTGGAAACGCTCTTTAAT 95068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557470343471400