Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq1633 86.0 9e-12 >seq1633 Length=412253 Score = 86.0 bits (94), Expect = 9e-12 Identities = 194/292 (66%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 215400 TCATCGCTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAA 215459 |||| ||| | ||| | | ||||| ||||| || | || || ||| | | ||| || Sbjct 238441 TCATTGCTACTCCTTCAATAGATATTGACGGTATTCGTGAACCTGTTTCCAGGTCTCTAT 238382 Query 215460 TGTATGGTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTAC 215519 | ||||| |||| || || |||||||| || | |||| ||| || || || || | Sbjct 238381 TTTATGGAAACAGTATTATTTCTGGTGCCATTATTCCTACTTCTGTAGCTATAGGTTTGC 238322 Query 215520 ACTTCTACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTT 215579 ||| ||||| | || ||||| || | |||| |||||| | |||||||| | |||| Sbjct 238321 GCTTTTACCCGAGATGAGAAGCGGCGTCCGTTGCTGAATGGTTATACAATGGCAGTCCTT 238262 Query 215580 TCCAACTGGTTATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGG 215639 | | || || | | || || | |||| | || ||| || | |||||| Sbjct 238261 ACGAGCTAATTGTTCTACATTTGTTACTTGGCGTAGCTTGTTACATGGGCCGTAAGTGGG 238202 Query 215640 AACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGC 215691 ||||| || | | || |||||| | |||||||| |||||| || || || Sbjct 238201 AACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGC 238150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744929724429360