Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq1633 91.5 2e-13 >seq1633 Length=412253 Score = 91.5 bits (100), Expect = 2e-13 Identities = 233/355 (66%), Gaps = 0/355 (0%) Strand=Plus/Minus Query 169735 TGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCT 169794 ||||| ||||| ||||||||||| | |||| | ||| | | ||||| | | | Sbjct 238502 TGGTTTGGTGTTTTGATGATCCCTACTTTATTGACTGCAACTTCTGTATTTATTATCGTT 238443 Query 169795 TTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTC 169854 |||| || |||| | | || || || || || | |||||||| | | || | Sbjct 238442 GTCATTGCTACTCCTTCAATAGATATTGACGGTATTCGTGAACCTGTTTCCAGGTCTCTA 238383 Query 169855 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTC 169914 | ||||| |||| || || |||||||| || |||| |||| || || ||| | Sbjct 238382 TTTTATGGAAACAGTATTATTTCTGGTGCCATTATTCCTACTTCTGTAGCTATAGGTTTG 238323 Query 169915 CACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCT 169974 | ||| || || | || ||||| || | | | ||| ||||| || || || ||||| Sbjct 238322 CGCTTTTACCCGAGATGAGAAGCGGCGTCCGTTGCTGAATGGTTATACAATGGCAGTCCT 238263 Query 169975 TATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGG 170034 || | || || | | || || | | || | || |||||||| | ||||| Sbjct 238262 TACGAGCTAATTGTTCTACATTTGTTACTTGGCGTAGCTTGTTACATGGGCCGTAAGTGG 238203 Query 170035 GAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTC 170089 ||||| | |||||| |||||||| |||||||| ||| |||||||| |||| Sbjct 238202 GAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTC 238148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582729193720800