Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq1633 122 1e-22 >seq1633 Length=412253 Score = 122 bits (134), Expect = 1e-22 Identities = 242/356 (68%), Gaps = 2/356 (1%) Strand=Plus/Plus Query 84556 GAGCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATT 84615 |||| || || |||||| ||||| || |||||||| | ||| | ||||||||| | Sbjct 238148 GAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACT 238207 Query 84616 CACGACCCATGTAAGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTC 84675 ||| ||||||||| | | | |||| | || || | |||| || | ||||| | Sbjct 238208 TACGGCCCATGTAACAAGCTACGCCAAGTAACAAATGTAGAACAATTAGCTCGTAAGGAC 238267 Query 84676 CACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGAC 84735 ||||| |||| |||||| | | || ||||| || | || || || | | || Sbjct 238268 TGCCATTGTATAACCATTCAGCAACGGACGCCGCTTCTCATCTCGGGTAAAAGCGCAAAC 238327 Query 84736 CAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAG 84795 | ||||| ||| | |||| | |||||||||||| || ||||||| || | |||| Sbjct 238328 CTATAGCTACAGAAGTAGGAATAATGGCACCAGAAATAATACTGTTTCCATAAAATAGAG 238387 Query 84796 AACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAA 84855 | | | || || ||||| |||||||||||||| | || || | | ||| || | | Sbjct 238388 ACCTGGAAACAGGTTCACGAATACCGTCAATATCTATTGAAGGAGTAGCAATGACAACGA 238447 Query 84856 TGATGAA-ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCA 84910 | || || ||||| ||| |||| | || ||| || ||||| | | |||||||| Sbjct 238448 TAATAAATACAGA-AGTTGCAGTCAATAAAGTAGGGATCATCAAAACACCAAACCA 238502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571157153017560