Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq1633 80.6 8e-11 >seq1633 Length=412253 Score = 80.6 bits (88), Expect = 8e-11 Identities = 252/385 (65%), Gaps = 4/385 (1%) Strand=Plus/Minus Query 25817 ACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCCTGCTTA 25876 || || ||||| |||| ||| || | | |||||| || || | ||||| |||| ||| Sbjct 238532 ACCAGCACTGAAAACCATCTTTACATCGAATGGTTTGGTGTTTTGATGAT-CCCTACTTT 238474 Query 25877 CTCG-CAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGATATAG 25934 | | | || ||| | ||| ||||| | | |||| || | || | ||||||| | Sbjct 238473 ATTGACTGCAACTTC-TGTATTTATTATCGTTGTCATTGCTACTCCTTCAATAGATATTG 238415 Query 25935 ATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATCAGGAG 25994 | || || ||||| || |||||| | || || | || ||||||| ||| || || || | Sbjct 238414 ACGGTATTCGTGAACCTGTTTCCAGGTCTCTATTTTATGGAAACAGTATTATTTCTGGTG 238355 Query 25995 CAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGCTGGCA 26054 | | | || | ||| || || || | | |||||||||| || ||||| | Sbjct 238354 CCATTATTCCTACTTCTGTAGCTATAGGTTTGCGCTTTTACCCGAGATGAGAAGCGGCGT 238295 Query 26055 CACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAA 26114 | | | || ||| ||||||||||| | || || | || ||| | | || || ||| Sbjct 238294 CCGTTGCTGAATGGTTATACAATGGCAGTCCTTACGAGCTAATTGTTCTACATTTGTTAC 238235 Query 26115 TAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAATGAGAC 26174 | || ||||| || || | |||||||||| || | | | || ||| | | Sbjct 238234 TTGGCGTAGCTTGTTACATGGGCCGTAAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCC 238175 Query 26175 CATGGATATTTGTTGCATATACAGC 26199 | ||||| |||||||||| |||| Sbjct 238174 CTTGGATTGCTGTTGCATATTCAGC 238150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146697987074568