Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq1633 96.9 1e-15 >seq1633 Length=412253 Score = 96.9 bits (106), Expect = 1e-15 Identities = 233/353 (66%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 36558 GCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGT 36617 |||||||| || ||| ||||| || | |||||| | | ||||||||||||| | Sbjct 238150 GCTGAATATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTTA 238209 Query 36618 CGTCCCAAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCT 36677 || |||| |||| | | |||| | || || | ||||| || | || || | Sbjct 238210 CGGCCCATGTAACAAGCTACGCCAAGTAACAAATGTAGAACAATTAGCTCGTAAGGACTG 238269 Query 36678 CCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCG 36737 || || |||||||| || | | || || ||||| || | ||||| ||| | | ||| Sbjct 238270 CCATTGTATAACCATTCAGCAACGGACGCCGCTTCTCATCTCGGGTAAAAGCGCAAACCT 238329 Query 36738 ATTGCGTTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCT 36797 || || || | || | || || ||||| || || |||||||||| | || | Sbjct 238330 ATAGCTACAGAAGTAGGAATAATGGCACCAGAAATAATACTGTTTCCATAAAATAGAGAC 238389 Query 36798 CCTGAGACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATT 36857 | || ||||| ||||||||||| || ||||| | | ||| | ||||| | | || Sbjct 238390 CTGGAAACAGGTTCACGAATACCGTCAATATCTATTGAAGGAGTAGCAATGACAACGATA 238449 Query 36858 AAAAATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCA 36910 | |||| | | ||| || || | | ||||||||| | || |||||||| Sbjct 238450 ATAAATACAGAAGTTGCAGTCAATAAAGTAGGGATCATCAAAACACCAAACCA 238502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150425265163678