Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq339 134 3e-26 >seq339 Length=880584 Score = 134 bits (148), Expect = 3e-26 Identities = 372/565 (66%), Gaps = 13/565 (2%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || |||||||||||||||||||| | ||| |||||||||||| ||| | ||| Sbjct 293686 GAAATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTCGAT 293627 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 || || |||||| | |||| | || || || |||||| || || || Sbjct 293626 CTCTCCCAGGACACCCGCCACTGGGAAGCCTTAACCCCCGACGAGACCCACTTCATCTCT 293567 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || ||||| || || || || |||||| || || | Sbjct 293566 CACATCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGGCCGT 293507 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || | ||| || |||||| |||||||| |||||||| || ||| Sbjct 293506 TTCATGACCGAGATCCAGGTCGCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCAATC 293447 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTC 25770 || || | ||||| ||| |||| || || ||| | ||| ||||| | ||| Sbjct 293446 GAGAACATCCACTCCGAGATGTA---CAGTCTCCTGCTCGAGACCTACATCAAGGACTCA 293390 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 | | | | || || || ||||||||| | || || | ||||||||| Sbjct 293389 GAGGTCAAGCACCGCCTCTTCCACGCCATCGAGACGGTGCCGTGCGTGGCCAGGAAGGCG 293330 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||||| ||||||||||||||| | ||| || || | |||| || | || || Sbjct 293329 GATTGGGCCATCAAGTGGATCAACAGCTCCGAG----ACCTTCGCCGAGAGGATCGTCGC 293274 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGC-GGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 ||||||| ||||| || ||||| ||| | || | | ||| |||| || ||||| | Sbjct 293273 CTTTGCTTGCGTGGAAGGGATCTTCTTCTCCGGGAGCTTCTGC-TCCATATTTTGGCTGA 293215 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || ||| |||||| || || ||| ||||||||| | | | ||||| | Sbjct 293214 AGAAGCGGGGTCTCATGCCAGGACTCACCTTCTCCAACGAGTTGGTGTCACGTGACGAAG 293155 Query 26009 GTCTCCACAGAGATTTTGCCTGCCT 26033 || | ||| | |||||||| ||||| Sbjct 293154 GTTTGCACTGCGATTTTGCGTGCCT 293130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928655466598080