Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq347 84.2 2e-11 >seq347 Length=438793 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | || || || || || || || ||| ||| Sbjct 270363 ATGCAAATCTTTGTGAAAACCCTTACTGGCAAGACAATCACTTTAGAGGTTGAAAGTTCT 270304 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||||| | || | ||| ||| ||| ||||| || || | || ||| || Sbjct 270303 GACACGGTTGATAATGTTAAGGCAAAGATCCAAGACAAGGAAGGTATCCCTCCAGACCAG 270244 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||||||||| |||||||| | |||||| ||| | || || || ||| Sbjct 270243 CAGAGGCTTATCTTTGCAGGCAAACAGCTTGAAGATGGCCGCACTCTTGCTGACTACAAC 270184 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || ||||||||||| || || ||| |||| Sbjct 270183 ATCCAAAAAGAATCCACCCTTCACCTGGT 270155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425320254385353