Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq1633 129 2e-25 >seq1633 Length=412253 Score = 129 bits (142), Expect = 2e-25 Identities = 251/371 (68%), Gaps = 0/371 (0%) Strand=Plus/Plus Query 18420 GCGGAATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGT 18479 || ||||| |||||| |||||| ||||||||||| | | ||||||||||||| | Sbjct 238150 GCTGAATATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTTA 238209 Query 18480 CGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCT 18539 || ||||||||| || | ||| | | || || | ||||| || | || || | Sbjct 238210 CGGCCCATGTAACAAGCTACGCCAAGTAACAAATGTAGAACAATTAGCTCGTAAGGACTG 238269 Query 18540 CCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCG 18599 || || |||||||| || | | || || ||||| || | ||||| ||| | | ||| Sbjct 238270 CCATTGTATAACCATTCAGCAACGGACGCCGCTTCTCATCTCGGGTAAAAGCGCAAACCT 238329 Query 18600 ATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCT 18659 || || ||| | || | || || || || || || |||||||||| | || | Sbjct 238330 ATAGCTACAGAAGTAGGAATAATGGCACCAGAAATAATACTGTTTCCATAAAATAGAGAC 238389 Query 18660 CCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATC 18719 | || ||||| ||||||||||| || || || | | ||||| ||||| | | || Sbjct 238390 CTGGAAACAGGTTCACGAATACCGTCAATATCTATTGAAGGAGTAGCAATGACAACGATA 238449 Query 18720 AAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACG 18779 | |||| | | || ||| || || | | ||||||||| | || |||||||| | | | Sbjct 238450 ATAAATACAGAAGTTGCAGTCAATAAAGTAGGGATCATCAAAACACCAAACCATTCGATG 238509 Query 18780 TAGAGGCGGTT 18790 || || |||| Sbjct 238510 TAAAGATGGTT 238520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151289097853858