Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq1633 104 3e-17 >seq1633 Length=412253 Score = 104 bits (114), Expect = 3e-17 Identities = 239/360 (66%), Gaps = 0/360 (0%) Strand=Plus/Plus Query 8481 ATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACC 8540 |||||| ||| ||||| || | |||||| || ||| | | ||||||| | || Sbjct 238155 ATATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTTACGGCC 238214 Query 8541 CATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTT 8600 ||||||| || | |||| | || || | | || | || || |||| || || Sbjct 238215 CATGTAACAAGCTACGCCAAGTAACAAATGTAGAACAATTAGCTCGTAAGGACTGCCATT 238274 Query 8601 ATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGC 8660 || ||||| ||| | | | || ||||| || | || || ||| | || || ||||| Sbjct 238275 GTATAACCATTCAGCAACGGACGCCGCTTCTCATCTCGGGTAAAAGCGCAAACCTATAGC 238334 Query 8661 GTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGC 8720 |||| |||| | |||||||| || || |||||||||| | | || | | Sbjct 238335 TACAGAAGTAGGAATAATGGCACCAGAAATAATACTGTTTCCATAAAATAGAGACCTGGA 238394 Query 8721 AACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAA 8780 ||||||||||||||||||||| ||||| | | |||| |||||| | | | ||||| Sbjct 238395 AACAGGTTCACGAATACCGTCAATATCTATTGAAGGAGTAGCAATGACAACGATAATAAA 238454 Query 8781 GCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAG 8840 || || |||| || || ||| ||||| | ||| |||||||| ||| ||||| Sbjct 238455 TACAGAAGTTGCAGTCAATAAAGTAGGGATCATCAAAACACCAAACCATTCGATGTAAAG 238514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615736864148040