Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq1633 80.6 8e-11 >seq1633 Length=412253 Score = 80.6 bits (88), Expect = 8e-11 Identities = 252/385 (65%), Gaps = 4/385 (1%) Strand=Plus/Plus Query 26462 GCTGTATATGCAACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGT 26521 |||| |||||||||| ||||| || | ||| || | | | || |||||||||| Sbjct 238150 GCTGAATATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTTA 238209 Query 26522 CTCCCTGCATATGCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCG 26581 | || || ||||| || | ||| || || | | ||| || | || || | | Sbjct 238210 CGGCCCATGTAACAAGCTACGCCAAGTAACAAATGTAGAACAATTAGCTCGTAAGGACTG 238269 Query 26582 CCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCG 26641 |||||||||| ||| || | | | | ||||| || |||||||||| | | || Sbjct 238270 CCATTGTATAACCATTCAGCAACGGACGCCGCTTCTCATCTCGGGTAAAAGCGCAAACCT 238329 Query 26642 ATTGCGTTAGAGGAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAG 26701 || || ||| | || | | || || || || ||| ||||||| || | || || Sbjct 238330 ATAGCTACAGAAGTAGGAATAATGGCACCAGAAATAATACTGTTTCCATAAAATAGAGAC 238389 Query 26702 CCGGAAACTGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGT 26761 | |||||| || ||||| || || || ||||||| | || | || |||| | | Sbjct 238390 CTGGAAACAGGTTCACGAATACCGTCAATATCTATTGAAGGAGTAGCAATGACAACGATA 238449 Query 26762 ATAAA-ACATGTAGTGGCTG-CGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCA 26819 ||||| ||| | ||| || | | | ||| |||| ||||| | || || |||||| | | Sbjct 238450 ATAAATACA-GAAGTTGCAGTCAATAAAGTAGGG-ATCATCAAAACACCAAACCATTCGA 238507 Query 26820 CATAGAGACGGTTCTCAGTACTTGT 26844 || ||| |||| ||||| || || Sbjct 238508 TGTAAAGATGGTTTTCAGTGCTGGT 238532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147683396217440