Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq1633 123 3e-23 >seq1633 Length=412253 Score = 123 bits (136), Expect = 3e-23 Identities = 253/376 (67%), Gaps = 0/376 (0%) Strand=Plus/Minus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| |||| | || ||| ||||| |||||| | ||||||||| | | ||| Sbjct 238525 CTGAAAACCATCTTTACATCGAATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACTG 238466 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| ||| |||||||| | ||| | |||| ||||| ||||||| Sbjct 238465 CAACTTCTGTATTTATTATCGTTGTCATTGCTACTCCTTCAATAGATATTGACGGTATTC 238406 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 ||||||| || | | ||| || | ||||| |||| || || |||||||| || | | Sbjct 238405 GTGAACCTGTTTCCAGGTCTCTATTTTATGGAAACAGTATTATTTCTGGTGCCATTATTC 238346 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| ||| || || ||| | | ||| || || | || ||||| || | ||| || Sbjct 238345 CTACTTCTGTAGCTATAGGTTTGCGCTTTTACCCGAGATGAGAAGCGGCGTCCGTTGCTG 238286 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| |||||||| |||||| | | || | || | || || | | || | Sbjct 238285 AATGGTTATACAATGGCAGTCCTTACGAGCTAATTGTTCTACATTTGTTACTTGGCGTAG 238226 Query 155291 CAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCT 155350 | ||| || ||| ||||||||||| || |||| | || ||||| |||||||| Sbjct 238225 CTTGTTACATGGGCCGTAAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTG 238166 Query 155351 GTGTTGCATACTCTGC 155366 ||||||||| || || Sbjct 238165 CTGTTGCATATTCAGC 238150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584715988654920