Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq347 132 3e-26 seq1118 131 1e-25 seq1128 125 5e-24 seq596 118 7e-22 seq181 109 4e-19 seq4739 89.7 3e-13 >seq347 Length=438793 Score = 132 bits (146), Expect = 3e-26 Identities = 171/234 (73%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| ||||| | || |||||||| ||| | |||| |||||| || |||||||| || | Sbjct 270591 TTCCACCCCTGAGCCGCAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTATAATCAG 270650 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 || |||| | || || |||||||| ||||||||||||| | |||||||||| | | Sbjct 270651 CAAGAGTGCGGCCGTCTTCAAGTTGCTTACCGGCGAAGATCAACCTTTGCTGGTCTGGAG 270710 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCC 34924 | | || |||||||| | || || ||||| || | ||||| ||| | | Sbjct 270711 GGATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCAGAGCTC 270766 Query 34925 TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || | || ||||| || || |||||||| |||||||||||||||||| Sbjct 270767 TCAACCTCGAGAGTGATGGTTTTGCCAGTGAGGGTTTTTACAAAGATCTGCATG 270820 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| ||||| || | || ||||| |||| ||||| ||||| || || || Sbjct 269944 CTCCTTCTGAATATTATAATCTGCAAGAGTGCGCCCATCCTCCAGCTGCTTCCCTGCAAA 270003 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| | ||||| ||| | || | ||| |||||||| | || ||| ||| || Sbjct 270004 GATCAACCTCTGCTGATCTAGTGGAATCCCTTCCTTGTCCTGAATCTTTGCTTTTACATT 270063 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || ||| || |||| ||| ||||| ||||| || | || || || Sbjct 270064 TTCAATGGTGTCCGAACTCTCAACCTCAAGGGTGATGGTTTTTCCAGTCAAAGTTTTGAC 270123 Query 34966 AAAGATCTGCAT 34977 ||| |||||||| Sbjct 270124 AAAAATCTGCAT 270135 >seq1118 Length=308725 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||| || | || |||| ||| | ||| ||||||||| ||||||||||| | Sbjct 111552 CCACCCCTTAAACGGAGAACCAAGTGCAGTGTGGACTCCTTCTGGATGTTATAGTCAGCA 111611 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| || |||||||| || ||||||||||| | |||||||||| | || Sbjct 111612 AGAGTGCGGCCATCTTCAAGTTGCTTACCAGCGAAGATCAGCCTTTGCTGGTCTGGTGGG 111671 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | |||||||||||| | || || || || || | ||||| ||| | || Sbjct 111672 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCAC--AT--TGTCGATGGTGTCAGAGCTTTC 111727 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||| || |||||||| || ||||| || ||||||||||||||||| Sbjct 111728 AACCTCAAGCGTGATGGTCTTGCCAGTGAGAGTTTTTACAAAGATCTGCAT 111778 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||| || ||||||||||| | || |||| |||| Sbjct 111795 AGAACCAAGTGAAGTGTGGATTCCTTTTGGATGTTATAGTCAGCCAGAGTGCGTCCATCC 111854 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || || |||||||| | |||||||||| | || | |||||||||||| Sbjct 111855 TCAAGCTGTTTACCAGCAAAGATCAGCCTTTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 111914 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | || | ||| | ||||| |||| ||| |||||| Sbjct 111915 TGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTTTCGACCTCAAGGGTGATGGTC 111974 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || ||||||||||||||||| Sbjct 111975 TTTCCAGTGAGAGTTTTTACAAAGATCTGCAT 112006 Score = 118 bits (130), Expect = 7e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| ||||| | | ||||||| ||| | |||| |||||| ||||||||||| || | Sbjct 111322 TTCCACCCCTGAGTCGTAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTATAATCAG 111381 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 || |||| |||| || ||||| || || ||||||||||| | ||| |||||| | | Sbjct 111382 CAAGAGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATCAGCCTTTGTTGGTCTGGAG 111441 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || |||||||| | || || ||||| | || | ||| | ||| | Sbjct 111442 GGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAA 111501 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | |||||||| || || |||||||| || ||||| ||||||||| Sbjct 111502 CCTCGAGAGTTATGGTTTTGCCAGTGAGGGTTTTCACAAAAATCTGCATG 111551 >seq1128 Length=278557 Score = 125 bits (138), Expect = 5e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | || ||||||||| ||||| ||||| | ||| ||||| | || Sbjct 246799 CAGCACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGCCCGTC 246740 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || || ||||| || | |||||||| | || | ||| |||||||| Sbjct 246739 CTCTAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTC 246680 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | |||||| |||||| | || | || || ||| || || | ||| || || Sbjct 246679 CTGGATTTTTGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCAACCTCCAGGGTAATCGT 246620 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || ||||||||||| ||||||||||||||| Sbjct 246619 CTTGCCGGTGAGGGTCTTGACAAAGATCTGCATG 246586 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | ||| |||||||| |||||||| || | || | || | || Sbjct 246570 AGAACCAGGTGGAGGGTTGATTCCTTCTGGATGTTATAATCGGCGAGAGTACGACCGTCC 246511 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||| |||| ||||| || | || | || |||||||| Sbjct 246510 TCGAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGATCCGGTGGGATGCCTTCCTTGTCC 246451 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || |||||| || | ||| |||||| Sbjct 246450 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTC 246391 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| || |||||||||||| Sbjct 246390 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 246358 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 246342 AGGACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 246283 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||| || || |||||||| | || | ||| |||||||| Sbjct 246282 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCC 246223 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || ||| || || | ||| |||||| Sbjct 246222 TGGATCTTGGCCTTAACGTTGTCGATGGTGTCGCTGCTCTCCACCTCGAGGGTGATGGTC 246163 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||||| || ||||||||||| Sbjct 246162 TTGCCGGTCAAAGTCTTCACGAAGATCTGCAT 246131 Score = 105 bits (116), Expect = 4e-18 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||||| ||| ||||||||||||||| || || | ||| | | |||| Sbjct 247027 CAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATC 246968 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||||| || || ||||||| | |||||||| | || | ||| |||||||| Sbjct 246967 CTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTC 246908 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || || || | ||||||| || || ||| || || | ||| | Sbjct 246907 CTGAATCTTCGCCTTCAC----GTTATCGATGGTGTCCGAGGACTCCACCTCCAAGGTGA 246852 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || ||||||||||| || || |||||||| Sbjct 246851 TGGTCTTGCCTGTGAGGGTCTTCACGAATATCTGCAT 246815 >seq596 Length=631412 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 |||||| |||||||||| ||||| || | || ||||||||| ||||| ||||| | Sbjct 343402 TCCTCCTCTCAACCTCAACACCAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 343343 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 | | | | || || || || |||||||||||||| || ||||||||||| |||| Sbjct 343342 CAAAGTCCTACCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGCGG 343283 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || |||||||| | || ||| ||| ||| | || | || || ||| || Sbjct 343282 GATGCCTTCCTTGTCTTGGATCTTTGCTTTCACGTTGTCAATGGTGTCCGAGGACTCCAC 343223 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| || ||||| ||||| ||||| || || ||||||||||| Sbjct 343222 CTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 343175 >seq181 Length=541317 Score = 109 bits (120), Expect = 4e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| | || | || | || || ||||| ||||| ||||| Sbjct 240845 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCTTCAAGTTGTTTTCCAGCGAA 240786 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || ||||| |||||| | || | || |||||||| | |||||| || ||| Sbjct 240785 GATGAGGCGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTTGCCTTCACGTT 240726 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || || ||||| || | |||||| ||||| ||||| ||||| || || Sbjct 240725 GTCGATGGTATCTGAGGATTCGACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCAC 240666 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 240665 GAAGATCTGCATG 240653 >seq4739 Length=93234 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || |||||||||||||||||| || | || | || |||| || Sbjct 55218 ACCAAGTGAAGTGTTGACTCCTTCTGAATGTTATAATCAGCAAGAATACGACCATCTTCG 55159 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| | ||| ||||| || | |||||||| | || | |||||||| || | Sbjct 55158 AGCTGCTTACTGGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGG 55099 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || ||| || || | || | |||| ||| ||||| | || ||||| || Sbjct 55098 ATCTTTGCCTTCACATTGTCAATAGTTTCAGAACTCTCAACATCCAAAGTGATGGTTTTA 55039 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| || |||||||||||||| Sbjct 55038 CCAGTAAGGGTTTTCACAAAGATCTGCAT 55010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325628071304033