Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq2265 452 4e-122 seq1633 136 4e-27 >seq2265 Length=185284 Score = 452 bits (500), Expect = 4e-122 Identities = 600/831 (72%), Gaps = 3/831 (0%) Strand=Plus/Plus Query 158955 ACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGT 159014 || || |||||||| ||||| || || | | | |||||| | || | || |||||| Sbjct 94232 ACCGCCGCAGTTTCTACTCCTACTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGT 94291 Query 159015 CCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTTTGTG 159074 ||||| || ||||| ||||| | ||| ||| | || || || |||| |||||| Sbjct 94292 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 94351 Query 159075 GCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGCACG- 159133 || || ||||| | || | ||||| ||||||||||| || || |||||||| || || Sbjct 94352 GCTCTACACGGCACTTTCGGACTAATAGGTTTCATGCTACGTCAATTTGAACTTGCTCGA 94411 Query 159134 TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159193 | | || || || || || ||||| || | ||||||| ||| ||||| |||||||| Sbjct 94412 TTTGTTCA--ATTCGACCTTATAATGCAATCACATTCTCTGTTCCAATTGCAGTTTTTGT 94469 Query 159194 CAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGG 159253 || ||||| || || ||||| |||||||| ||||||| || || || ||||| Sbjct 94470 TTCTGTATTCCTGATTTATCCACTGGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGG 94529 Query 159254 GGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACACTAAA 159313 || || || ||||| | ||| | ||||| | |||||||| || ||||||||| | || Sbjct 94530 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 94589 Query 159314 CCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCTATTCA 159373 || || ||||| |||||||||| ||| | | || | || ||||||| |||||||| Sbjct 94590 TCCATTTCATATAATGGGAGTTGACGGTGTATTGGGCGCTGCTCTTCTATGCGCTATTCA 94649 Query 159374 TGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGC 159433 ||| | || || |||||||| |||| || ||||| || ||||| || || | || Sbjct 94650 TGGTGCTACTGTGGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCTATGC 94709 Query 159434 GTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 159493 ||| | ||||||||| | || |||||||| ||||||||||| |||||||| ||||| Sbjct 94710 TTTTAACCCAACTCAAGCTAAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTC 94769 Query 159494 GCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGT 159553 || || || || ||||| ||||| || || || ||| | |||||||||||||| ||||| Sbjct 94770 CCAAATATTTGGGATTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 94829 Query 159554 GCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCG 159613 || || | ||| |||||| | | | || | | ||||| ||||| || || || Sbjct 94830 ACCAGTAACCGGTTTATGGATGAGCGCTCTCGGAGTAGTCGGTCTGGCTCTGAACCTACG 94889 Query 159614 TGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTT 159673 ||| || || ||||| ||| || || | ||||| ||||||| |||||||| || || Sbjct 94890 TGCCTATGACTTCGTTTCTCAGGAAATTCGTGCAGCGAAAGATCCCGAATTTGAGACTTT 94949 Query 159674 CTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCA 159733 ||||||||| || ||||| | || ||||| | ||| ||||| |||| || ||||| Sbjct 94950 CTACACCAAAAATATTCTATTAAACGAAGGTATTCGTCCTTGGATGGCGACTCAAGATCA 95009 Query 159734 ACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784 || ||||||||| | || ||||| || || ||||| || | || ||||| Sbjct 95010 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTGCCCCGTGGAAACGC 95060 >seq1633 Length=412253 Score = 136 bits (150), Expect = 4e-27 Identities = 244/354 (69%), Gaps = 2/354 (1%) Strand=Plus/Minus Query 157096 TGGTTCGGTGTGCTTATGATTCCAACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGC 157154 ||||| ||||| | ||||| || || || | | |||||| |||| || ||| | | Sbjct 238502 TGGTTTGGTGTTTTGATGATCCCTACTTTATTGACTGCAACT-TCTGTATTTATTATCGT 238444 Query 157155 ATTCGTAGCAGCACCTCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCT 157214 || | || | ||| | | ||||| ||||||||||| ||||| ||| | | ||||| Sbjct 238443 TGTCATTGCTACTCCTTCAATAGATATTGACGGTATTCGTGAACCTGTTTCCAGGTCTCT 238384 Query 157215 CATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCT 157274 | ||||| |||| || || |||||||| || ||||| |||| || || ||| | Sbjct 238383 ATTTTATGGAAACAGTATTATTTCTGGTGCCATTATTCCTACTTCTGTAGCTATAGGTTT 238324 Query 157275 TCACTTCTACCCCATCTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCC 157334 | ||| ||||| | || ||||| || || ||| ||| ||| | ||||| || |||| Sbjct 238323 GCGCTTTTACCCGAGATGAGAAGCGGCGTCCGTTGCTGAATGGTTATACAATGGCAGTCC 238264 Query 157335 TTTCCAACTGGTAGTCTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTG 157394 || | | || | || | || || | | ||| | | || ||||| ||| |||| Sbjct 238263 TTACGAGCTAATTGTTCTACATTTGTTACTTGGCGTAGCTTGTTACATGGGCCGTAAGTG 238204 Query 157395 GGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGC 157448 ||||||| || |||||| ||||||||||| ||||| |||||| || || || Sbjct 238203 GGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGC 238150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545162452792560