Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1829 84.2 5e-11 >seq1829 Length=262397 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 304937 CAGGCATCTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAA 304996 ||||| | || |||||||| |||||| | || |||| | | |||| | || Sbjct 252857 CAGGCTACCCAGAGATCTGGGAGACCTATTAAATCTATTTGTAGTAGGCTTAAGGCAAAG 252798 Query 304997 GAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTA 305056 || || || || ||||||| | |||||||||||||| |||||| |||| ||| || Sbjct 252797 GAAGGCCGGATAAGAGGTAACTTGATGGGAAAACGTGTGGATTTTTCTGCACGAACAGTT 252738 Query 305057 ATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGA-AATTGCTTT 305115 ||||| |||||| | | || | || ||||| | |||||||| | || || ||||| Sbjct 252737 ATCACGCCTGATCCAAACATCAACATTGATGAACTGGGAGTTCC-GTGGAGTATCGCTTT 252679 Query 305116 AAAACTAACATTTCCAGA 305133 ||| || |||| ||| || Sbjct 252678 AAATCTCACATATCCGGA 252661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186564835122027