Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq1633 84.2 7e-12 seq402 84.2 7e-12 >seq1633 Length=412253 Score = 84.2 bits (92), Expect = 7e-12 Identities = 205/308 (67%), Gaps = 2/308 (1%) Strand=Plus/Minus Query 19598 TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTA 19657 || ||||| | ||||||| |||| || | || ||||| || || || ||||| || Sbjct 238454 TTTATTATCGTTGTCATTGCTACTCCTTCAATAGATATTGACGGTATTCGTGAACCTGTT 238395 Query 19658 TCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGCAAT 19717 ||| | || |||||||||||| || || || || ||| | |||| | | | | Sbjct 238394 TCCAGGTCTCTATTTTATGGAAACAGTATTATTTCTGGTGCCATTATTCCTA-CTTCTGT 238336 Query 19718 -GCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTA 19776 || || || | | ||| ||||| | || ||||| || ||| ||||||| | || Sbjct 238335 AGCTATAGGTTTGCGCTTTTACCCGAGATGAGAAGCGGCGTCCGTTGCTGAATGGTTATA 238276 Query 19777 CAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACAT 19836 ||| || | || | | | || | || | || || | ||||| | | |||||| Sbjct 238275 CAATGGCAGTCCTTACGAGCTAATTGTTCTACATTTGTTACTTGGCGTAGCTTGTTACAT 238216 Query 19837 GGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTA 19896 ||| || ||||||||||||| | || | || ||| | ||||||||| |||||| || Sbjct 238215 GGGCCGTAAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATA 238156 Query 19897 CTCTGCTC 19904 || |||| Sbjct 238155 TTCAGCTC 238148 >seq402 Length=581868 Score = 84.2 bits (92), Expect = 7e-12 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 20387 GGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTG 20446 |||||||| ||| |||| |||||||| ||| | || |||||| || || | | || Sbjct 365480 GGTCGTGTAATTAATACATGGGCTGATATTATTAACTTTGCTAACCTGGGTATGGTAGTT 365421 Query 20447 ATGCATGAACGGAATGCTCATAACTTCCCACTTGAC 20482 ||||||||||| ||||||||||||||||| || ||| Sbjct 365420 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGAC 365385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148799979954006