Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq596 143 3e-29 seq1128 122 9e-23 seq1118 116 4e-21 seq347 113 5e-20 seq181 113 5e-20 seq335 96.9 4e-15 >seq596 Length=631412 Score = 143 bits (158), Expect = 3e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||||||||| | | |||||| || || ||||| || ||||| || |||||||||||| | Sbjct 343402 TCCTCCTCTCAACCTCAACACCAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 343343 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | ||| ||||||||||| || || || || | || ||||| || ||||| Sbjct 343342 CAAAGTCCTACCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGCGG 343283 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || ||||| || ||| ||| || ||| | ||||| || || ||||| Sbjct 343282 GATGCCTTCCTTGTCTTGGATCTTTGCTTTCACGTTGTCAATGGTGTCCGAGGACTCCAC 343223 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGT 134724 || || || || || || || |||| ||||| ||||| || |||||| || | |||| Sbjct 343222 CTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTGTGGTGTTGT 343164 >seq1128 Length=278557 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||| ||||| || |||||||||||| | Sbjct 246357 CCGCCACGGAGACGGAGGACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCG 246298 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| || || || || || | ||||||||| || || || Sbjct 246297 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGG 246238 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || || || ||| | |||||| ||||| Sbjct 246237 ATCCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGCTGCTCTCCACC 246178 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| ||||| || ||||| || ||||| Sbjct 246177 TCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTCACGAAGATCTGCAT 246131 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| || || || ||||| || ||||||||||| ||| |||| | Sbjct 246804 AGACGCAGCACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGC 246745 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| || |||||||| || | | |||||| || || || || ||||| Sbjct 246744 CCGTCCTCTAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATCCCTTCC 246685 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || |||||| ||||| ||| | |||||| || || || || ||| Sbjct 246684 TTGTCCTGGATTTTTGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCAACCTCCAGGGTA 246625 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || || || || ||||| Sbjct 246624 ATCGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 246587 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| || ||||| || || || ||||| ||||||||||| || || Sbjct 247041 CCACCACGGAGACGCAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCA 246982 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || | ||| || || ||||| ||||| | |||||| || || || Sbjct 246981 AGGGTCCTTCCATCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGG 246922 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || ||||| || || || || | ||||| || || ||||| Sbjct 246921 ATCCCTTCCTTGTCCTGAATCTTCGCCTTCACGTTATCGATGGTGTCCGAGGACTCCACC 246862 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || | || || ||||| || ||||| Sbjct 246861 TCCAAGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAATATCTGCAT 246815 >seq1118 Length=308725 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| || |||||||| || || |||||||||||| || Sbjct 110868 CCACCGCGGAGACGGAGCACGAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGCA 110927 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || |||||||||||||||||||| | | ||| || || || || Sbjct 110928 AGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGG 110987 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || |||||||| ||| || || || | || || || ||| || Sbjct 110988 ATACCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCAATCGTATCAGAACTTTCAACC 111047 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || ||||| || || | ||||| || || |||||||| Sbjct 111048 TCTAAAGTGATTGTTTTGCCAGTGAGGGTTTTCACAAAGATTTGCAT 111094 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 |||||||||||||| || |||||||| ||| ||| | || || |||||||| ||| Sbjct 111126 GTGGATTCCTTTTGGATATTGTAGTCTGCAAGAGTGCGGCCATCTTCAAGCTGTTTACCT 111185 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||||||||| | |||||| ||||| || || ||||| || || || || || ||| Sbjct 111186 GCAAAAATCAACCTCTGCTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTG 111245 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || ||| | || || || ||| || || | ||| || || || ||||| | ||| Sbjct 111246 ACATTGTCAATGGTATCAGAACTTTCAACCTCCAAAGTGATAGTCTTGCCGGTAAGAGTC 111305 Query 134697 TTAACGAAAATTTGCATT 134714 || || || ||||||||| Sbjct 111306 TTCACAAATATTTGCATT 111323 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || |||||||| | || | ||| || ||||| |||||||||||||| || || Sbjct 111322 TTCCACCCCTGAGTCGTAGGACCAAGTGGAGGGTGGACTCCTTTTGAATGTTATAATCAG 111381 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| ||| | || || || ||||| || || || |||| | || || || || | Sbjct 111382 CAAGAGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATCAGCCTTTGTTGGTCTGGAG 111441 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || || || || || ||||| ||| | ||||| || || | Sbjct 111442 GGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAA 111501 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | |||||||| |||||||| || || | ||||| || ||||| ||||| Sbjct 111502 CCTCGAGAGTTATGGTTTTGCCAGTGAGGGTTTTCACAAAAATCTGCAT 111550 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | || | ||| || |||||||||||||| ||||| ||||| | Sbjct 111780 CCACCCCTGAGACGGAGAACCAAGTGAAGTGTGGATTCCTTTTGGATGTTATAGTCAGCC 111839 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || |||||||| || ||||| |||| | ||||| || || || Sbjct 111840 AGAGTGCGTCCATCCTCAAGCTGTTTACCAGCAAAGATCAGCCTTTGCTGGTCTGGTGGG 111899 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | ||||| || ||| || Sbjct 111900 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTTTCGACC 111959 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | |||||| || || || ||||| Sbjct 111960 TCAAGGGTGATGGTCTTTCCAGTGAGAGTTTTTACAAAGATCTGCAT 112006 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || ||||| || || || || || ||| || | || || Sbjct 110658 ACAAGATGCAGAGTAGACTCCTTCTGGATATTATAATCTGCAAGAGTACGCCCATCCTCC 110717 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| ||||| | |||||| || || || || ||||| || || ||| Sbjct 110718 AGCTGCTTCCCCGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGA 110777 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| || || || | ||||| || || || || ||||| || ||||| Sbjct 110778 ATCTTTGACTTAACATTATCAATGGTGTCCGAACTCTCAACCTCAAGAGTGATAGTTTTT 110837 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||||||||| ||||| ||||| Sbjct 110838 CCAGTCAAAGTTTTAACAAAAATCTGCAT 110866 >seq347 Length=438793 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || |||||||| ||||| ||||||||||| || Sbjct 270137 CCACCGCGGAGACGGAGCACCAGGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGCA 270196 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||||||||||||||| || | | |||||| || || || Sbjct 270197 AGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGG 270256 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || ||| || || || | ||||| || ||| || Sbjct 270257 ATACCTTCCTTGTCTTGGATCTTTGCCTTAACATTATCAACCGTGTCAGAACTTTCAACC 270316 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || || || || | ||||| || || |||||||| Sbjct 270317 TCTAAAGTGATTGTCTTGCCAGTAAGGGTTTTCACAAAGATTTGCAT 270363 Score = 109 bits (120), Expect = 6e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 |||||||||||||| || |||||||| ||| ||| | || || |||||||| ||| Sbjct 270395 GTGGATTCCTTTTGGATATTGTAGTCCGCAAGGGTACGGCCATCTTCAAGCTGTTTACCT 270454 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||||||||| | |||||| ||||| || || ||||| || || || || || ||| Sbjct 270455 GCAAAAATCAACCTCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTG 270514 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || ||| | || || || ||| || || | ||| || || || || || | ||| Sbjct 270515 ACATTGTCAATGGTATCAGAACTTTCAACTTCCAAAGTGATAGTCTTGCCAGTAAGAGTC 270574 Query 134697 TTAACGAAAATTTGCATT 134714 || || || ||||||||| Sbjct 270575 TTCACAAAGATTTGCATT 270592 >seq181 Length=541317 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| ||||| || ||||| || |||||||||||| | Sbjct 240880 CCGCCGCGGAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 240821 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || || ||||| || || || || | || || || || || || Sbjct 240820 AGAGTCCGGCCGTCTTCAAGTTGTTTTCCAGCGAAGATGAGGCGTTGTTGGTCTGGTGGG 240761 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| |||||| || || ||| | || || || ||||| || Sbjct 240760 ATGCCTTCCTTGTCTTGGATTTTTGCCTTCACGTTGTCGATGGTATCTGAGGATTCGACC 240701 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || |||| ||||| ||||| || ||||| Sbjct 240700 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 240654 >seq335 Length=478728 Score = 96.9 bits (106), Expect = 4e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| || || | |||||| ||||| || || || |||||||| || |||||||| Sbjct 394874 TTCCTCCCCTAAGCCTCAACACCAGGTGAAGTGTCGACTCCTTTTGGATATTGTAGTCAG 394815 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| ||| | || || | ||||| || ||||||||||| | ||||||||| || | Sbjct 394814 CAAGGGTTCGGCCATCTTCCAATTGTTTTCCAGCAAAAATCAATCTCTGCTGATCAGGAG 394755 Query 134605 GTATGCCTTCTTTTTC 134620 | || |||||||| || Sbjct 394754 GGATACCTTCTTTGTC 394739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505295380853640