Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1128 150 1e-31 seq596 149 5e-31 seq347 129 4e-25 seq181 120 2e-22 seq1118 105 5e-18 seq335 95.1 9e-15 >seq1128 Length=278557 Score = 150 bits (166), Expect = 1e-31 Identities = 161/211 (76%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGT 44186 || |||||||| || |||||| || ||||||||||| || || || || | || | Sbjct 247023 ACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAG--GGTCCTTCCATCCT 246966 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| ||||||||| ||||||||||| | |||||| || | ||| | |||||||| ||| Sbjct 246965 CCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCT 246906 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||||| | | |||||||| | ||| |||||||||| || || |||| Sbjct 246905 GAATCTTCGCCTTCACGTTATCGATGGTGTCCGAGGACTCCACCTCCAAGGTGATGGTCT 246846 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||||||||| || ||||| Sbjct 246845 TGCCTGTGAGGGTCTTCACGAATATCTGCAT 246815 Score = 145 bits (160), Expect = 5e-30 Identities = 169/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||||||||| |||||||| ||| |||| || Sbjct 246339 ACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCG 246280 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | ||| | |||||||| ||| Sbjct 246279 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGG 246220 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| || ||| | ||||||||| | |||||||| | || || ||||| Sbjct 246219 ATCTTGGCCTT-AACGTTGTCGATGGTGTCGCTGCTCTCCACCTCGAGGGTGATGGTCTT 246161 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAATGAAAA 44351 || || | |||||||||||||| ||||| ||||||| |||| Sbjct 246160 GCCGGTCAAAGTCTTCACGAAGATCTGCAT-CTGTGAATCAAAA 246118 Score = 143 bits (158), Expect = 2e-29 Identities = 173/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | || ||||||||| || || |||||| ||||||||||| || Sbjct 246817 CATCCCACCACGCAGACGCAGCACCAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTC 246758 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || |||| |||| || ||||||||||| |||||||| | | |||||| || | Sbjct 246757 TGCAAGGGTGCGCCCGTCCTCTAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCCGG 246698 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| || || ||| | | ||| | ||||||||| | | Sbjct 246697 TGGGATCCCTTCCTTGTCCTGGATTTT-TGCCTTGACGTTGTCGATGGTGTCGCTGCTCT 246639 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||||| ||||||||||| || ||||||||||| || ||||| |||||| Sbjct 246638 CAACCTCCAGGGTAATCGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATG 246586 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||||| |||||||| ||||||||||| || |||| || Sbjct 246567 ACCAGGTGGAGGGTTGATTCCTTCTGGATGTTATAATCGGCGAGAGTACGACCGTCCTCG 246508 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | | ||||||||| | || | |||||||| ||| Sbjct 246507 AGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGATCCGGTGGGATGCCTTCCTTGTCCTGG 246448 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||||||| | || ||||| | || || ||||| Sbjct 246447 ATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTCTTG 246388 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||||||| |||||||| |||||| Sbjct 246387 CCGGTGAGGGTCTTGACGAAGATCTGCATG 246358 >seq596 Length=631412 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| ||||||| ||||||||||| || ||||| |||||| ||||||||||| ||||| Sbjct 343402 TCCTCCTCTCAACCTCAACACCAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 343343 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 | | |||| || ||||| || ||||| ||||| | || ||||| || | || Sbjct 343342 CAAAGTCCTACCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGCGG 343283 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCA 44288 | |||||||| || ||||| ||||| | ||| | |||||||| | ||| |||| Sbjct 343282 GATGCCTTCCTTGTCTTGGATCTT-TGCTTTCACGTTGTCAATGGTGTCCGAGGACTCCA 343224 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || |||||||| ||||| ||||| ||||||||||| ||||| Sbjct 343223 CCTCCAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 343175 >seq347 Length=438793 Score = 129 bits (142), Expect = 4e-25 Identities = 172/237 (73%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || || || | || |||| ||| || ||| ||||||||||||||| || Sbjct 270586 TTGCATTCCACCCCTGAGCCGCAGGACCAAGTGGAGGGTGGACTCCTTTTGGATGTTATA 270645 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || || ||| |||| || || ||||| ||||| |||||||| | ||||| || Sbjct 270646 ATCAGCAAGAGTGCGGCCGTCTTCAAGTTGCTTACCGGCGAAGATCAACCTTTGCTGGTC 270705 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 || ||| | |||||||| ||| ||||| ||| || ||| | |||||||| | | Sbjct 270706 TGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGT--CGATGGTGTCAGAG 270763 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||| | || || || || || |||||||| || || ||||| |||||| Sbjct 270764 CTCTCAACCTCGAGAGTGATGGTTTTGCCAGTGAGGGTTTTTACAAAGATCTGCATG 270820 Score = 114 bits (126), Expect = 9e-21 Identities = 154/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| ||| || |||||||||||||| || || || ||| | || || Sbjct 270154 CACCAGGTGAAGGGTGGATTCTTTTTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCTTC 270213 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||| || || |||||||| | | |||||| |||| ||| | ||||||||| || Sbjct 270214 AAGCTGTTTGCCTGCAAAGATAAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCTTG 270273 Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | || || | | ||||| | ||| ||||| | || || |||| Sbjct 270274 GATCTT-TGCCTTAACATTATCAACCGTGTCAGAACTTTCAACCTCTAAAGTGATTGTCT 270332 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || ||||| ||||| |||||||||||| Sbjct 270333 TGCCAGTAAGGGTTTTCACAAAGATTTGCATG 270364 Score = 100 bits (110), Expect = 2e-16 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| ||||| ||||| | | || | ||| | ||| ||||||||||| ||||| Sbjct 270358 TTGCATGCCCCCCCTCAGACGAAGAACTAAGTGCAAAGTGGATTCCTTTTGGATATTGTA 270417 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || || || || | || || ||||| || || ||||| ||||| | |||||| || Sbjct 270418 GTCCGCAAGGGTACGGCCATCTTCAAGCTGTTTACCTGCAAAAATCAACCTCTGCTGGTC 270477 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281 | ||| | |||||||| ||| ||||| ||| || ||| | ||||| || | Sbjct 270478 GGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGT--CAATGGTATCAGAA 270535 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||| || || ||||| || || || |||||||| ||||||||||| Sbjct 270536 CTTTCAACTTCCAAAGTGATAGTCTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 270591 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || || || ||||| || || |||| | || |||||||||||||| ||||| Sbjct 269944 CTCCTTCTGAATATTATAATCTGCAAGAGTGCGCCCATCCTCCAGCTGCTTCCCTGCAAA 270003 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC-TTCAATG 44264 |||||| | |||||||||| || | |||||||| ||| ||||| ||| || | Sbjct 270004 GATCAACCTCTGCTGATCTAGTGGAATCCCTTCCTTGTCCTGAATCTT-TGCTTTTACAT 270062 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | |||||||| | || ||||| | || || || ||||| || | || || | Sbjct 270063 TTTCAATGGTGTCCGAACTCTCAACCTCAAGGGTGATGGTTTTTCCAGTCAAAGTTTTGA 270122 Query 44325 CGAAGATTTGCAT 44337 | || || ||||| Sbjct 270123 CAAAAATCTGCAT 270135 >seq181 Length=541317 Score = 120 bits (132), Expect = 2e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| ||||| |||||| ||||||||||| |||||||| || |||| || Sbjct 240863 CACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTCCGGCCGTCTTC 240804 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || || || || || ||||| | || || || |||| || | |||||||| || Sbjct 240803 AAGTTGTTTTCCAGCGAAGATGAGGCGTTGTTGGTCTGGTGGGATGCCTTCCTTGTCTTG 240744 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || || ||||| | | ||||| || | |||||| ||||| | || |||||||| Sbjct 240743 GATTTTTGCCTTCACGTTGTCGATGGTATCTGAGGATTCGACCTCTAGGGTTATCGTCTT 240684 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| ||||| ||||||||||| |||||| Sbjct 240683 CCCCGTTAGGGTTTTCACGAAGATCTGCATG 240653 >seq1118 Length=308725 Score = 105 bits (116), Expect = 5e-18 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||||||||||| || || || || ||| | || || Sbjct 111798 ACCAAGTGAAGTGTGGATTCCTTTTGGATGTTATAGTCAGCCAGAGTGCGTCCATCCTCA 111857 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || |||||||||| | ||||| |||| || | || ||||| ||| Sbjct 111858 AGCTGTTTACCAGCAAAGATCAGCCTTTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGG 111917 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | | ||| ||||| | || || |||| Sbjct 111918 ATCTTGGCCTTGACATTGT--CAATGGTGTCAGAGCTTTCGACCTCAAGGGTGATGGTCT 111975 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| ||||| || || || ||||| ||||| Sbjct 111976 TTCCAGTGAGAGTTTTTACAAAGATCTGCAT 112006 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| | ||| ||||||||||| ||||| || || || ||| | || || Sbjct 111114 ACCAAGTGCAAAGTGGATTCCTTTTGGATATTGTAGTCTGCAAGAGTGCGGCCATCTTCA 111173 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || ||||| ||||| | |||||| || | || | |||||||| ||| Sbjct 111174 AGCTGTTTACCTGCAAAAATCAACCTCTGCTGGTCGGGTGGGATTCCTTCCTTGTCCTGG 111233 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | ||||| || | ||| ||||||| || || |||| Sbjct 111234 ATCTTGGCCTTGACATTGT--CAATGGTATCAGAACTTTCAACCTCCAAAGTGATAGTCT 111291 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || || |||||||| || |||||||| Sbjct 111292 TGCCGGTAAGAGTCTTCACAAATATTTGCAT 111322 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| ||| || || ||||||||||| ||||| || ||| | || || Sbjct 110885 CACGAGGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCTTC 110944 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||| || || ||||| || | | ||| || |||| || | ||| ||||| || Sbjct 110945 AAGCTGTTTGCCTGCAAAAATAAGCCTCTGTTGGTCTGGGGGGATACCCTCCTTGTCTTG 111004 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | || || || | ||| ||||| | || || || || Sbjct 111005 AATCTTTGCCTTCACATTATCAATCGTATCAGAACTTTCAACCTCTAAAGTGATTGTTTT 111064 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||||| ||||| |||||||||||| Sbjct 111065 GCCAGTGAGGGTTTTCACAAAGATTTGCATG 111095 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||| || ||||| || || ||| | || |||||||||||||| ||||| Sbjct 110675 CTCCTTCTGGATATTATAATCTGCAAGAGTACGCCCATCCTCCAGCTGCTTCCCCGCAAA 110734 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| | |||||| |||| || | |||||||| ||| ||||| ||| | | Sbjct 110735 GATCAACCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTTGACTTAACATT 110794 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | || ||||| | || || || ||||| || | || || || Sbjct 110795 ATCAATGGTGTCCGAACTCTCAACCTCAAGAGTGATAGTTTTTCCAGTCAAAGTTTTAAC 110854 Query 44326 GAAGATTTGCAT 44337 || || ||||| Sbjct 110855 AAAAATCTGCAT 110866 >seq335 Length=478728 Score = 95.1 bits (104), Expect = 9e-15 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| || || || ||||||||||||||||| || |||||||||||| ||||| || | Sbjct 394874 TTCCTCCCCTAAGCCTCAACACCAGGTGAAGTGTCGACTCCTTTTGGATATTGTAGTCAG 394815 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | || || | || |||| || || || ||||| ||||| | ||||||||| | || Sbjct 394814 CAAGGGTTCGGCCATCTTCCAATTGTTTTCCAGCAAAAATCAATCTCTGCTGATCAGGAG 394755 Query 44229 GCACACCTTCCTTTTCC 44245 | | |||||| || ||| Sbjct 394754 GGATACCTTCTTTGTCC 394738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359918854945419