Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq596 206 6e-48 seq1128 188 2e-42 seq1118 183 7e-41 seq347 178 3e-39 seq181 165 2e-35 seq4739 143 6e-29 seq335 95.1 3e-14 seq5626 89.7 1e-12 seq3080 86.0 2e-11 >seq596 Length=631412 Score = 206 bits (228), Expect = 6e-48 Identities = 173/212 (82%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || ||||||||||| |||||||| ||| ||| Sbjct 343178 CAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTGGAGGTGGAGTCCTCGGAC 343237 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| ||| |||||| || ||||| ||||| ||||| |||||||||||| Sbjct 343238 ACCATTGACAACGTGAAAGCAAAGATCCAAGACAAGGAAGGCATCCCGCCGGACCAGCAA 343297 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||||||||||||||| || |||||| | ||||| || ||| || Sbjct 343298 CGCCTCATCTTCGCCGGAAAACAGCTCGAAGACGGTAGGACTTTGGCCGACTACAACATC 343357 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAG 178135 || || || || || || ||||| || ||||| Sbjct 343358 CAGAAGGAGTCGACGCTCCATCTGGTGTTGAG 343389 >seq1128 Length=278557 Score = 188 bits (208), Expect = 2e-42 Identities = 166/207 (80%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||||||||||| || ||| ||| Sbjct 246362 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGAGCAGCGAC 246421 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| ||||| ||||| ||||| ||||| Sbjct 246422 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCACCGGATCAGCAG 246481 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| |||||||||||||| |||||||| || || | ||||| |||||||||||| || Sbjct 246482 AGACTCATCTTCGCCGGAAAGCAGCTCGAGGACGGTCGTACTCTCGCCGATTATAACATC 246541 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || |||||||| || || || ||| Sbjct 246542 CAGAAGGAATCAACCCTCCACCTGGTT 246568 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| ||| | || || || || ||||||||||||||||| ||| ||| Sbjct 246134 CAGATCTTCGTGAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTGGAGAGCAGCGAC 246193 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| ||||| ||||||||||||||||| Sbjct 246194 ACCATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAAGGGATCCCTCCGGACCAGCAG 246253 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| |||||||| || || | || || ||||| || ||| || Sbjct 246254 CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATC 246313 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || || Sbjct 246314 CAGAAGGAGTCCACACTCCACCTCGT 246339 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || |||||||| || || |||||| | |||||||| ||| ||| Sbjct 246818 CAGATATTCGTGAAGACCCTCACAGGCAAGACCATCACCTTGGAGGTGGAGTCCTCGGAC 246877 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| ||||| ||||||||||||||||| Sbjct 246878 ACCATCGATAACGTGAAGGCGAAGATTCAGGACAAGGAAGGGATCCCTCCGGACCAGCAG 246937 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || ||| | || ||||||||||| ||||| ||||| ||| | Sbjct 246938 AGGTTGATCTTTGCTGGGAAGCAGTTGGAGGATGGAAGGACCCTTGCTGATTACAACATT 246997 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 246998 CAGAAGGAGTCTACCCTTCACCTTGT 247023 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || ||||| ||||| ||||| || ||| ||| Sbjct 246590 CAGATCTTTGTCAAGACCCTCACCGGCAAGACGATTACCCTGGAGGTTGAGAGCAGCGAC 246649 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||| || |||||||| ||||| ||||| ||||||||||| Sbjct 246650 ACCATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGGATCCCACCGGACCAGCAG 246709 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || || ||||| || || || | || ||||| || || ||| || Sbjct 246710 AGGCTCATCTTTGCAGGGAAGCAGCTAGAGGACGGGCGCACCCTTGCAGACTACAACATC 246769 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || || Sbjct 246770 CAGAAGGAGTCTACACTCCACCTGGT 246795 >seq1118 Length=308725 Score = 183 bits (202), Expect = 7e-41 Identities = 166/208 (80%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||||||||| ||||| || |||||||| ||||| |||||||| ||| Sbjct 112003 CAGATCTTTGTAAAAACTCTCACTGGAAAGACCATCACCCTTGAGGTCGAAAGCTCTGAC 111944 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| |||||||| || || ||||| || ||||||||| Sbjct 111943 ACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCAGACCAGCAA 111884 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || |||||||| || |||||| | ||||| || || |||||| || Sbjct 111883 AGGCTGATCTTTGCTGGTAAACAGCTTGAGGATGGACGCACTCTGGCTGACTATAACATC 111824 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| ||||| ||||| || |||| || Sbjct 111823 CAAAAGGAATCCACACTTCA-CTTGGTT 111797 Score = 168 bits (186), Expect = 2e-36 Identities = 163/208 (78%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||||||||| || || || ||||| || ||||| |||||||| ||| Sbjct 111775 CAGATCTTTGTAAAAACTCTCACTGGCAAGACCATCACGCTTGAGGTTGAAAGCTCTGAC 111716 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| || || ||||| || ||||||||| Sbjct 111715 ACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATCCCACCAGACCAGCAA 111656 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || |||||||| || || || || |||||||| | |||||||| || |||||| || Sbjct 111655 AGGCTGATCTTCGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTGCTGACTATAACATC 111596 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || || |||||||| |||| || Sbjct 111595 CAGAAGGAGTCCACACTGCA-CTTGGTT 111569 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || |||||| | || |||||||| ||||| || ||||| || || || ||| Sbjct 110863 CAGATTTTTGTTAAAACTTTGACTGGAAAAACTATCACTCTTGAGGTTGAGAGTTCGGAC 110804 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||||||||||||| ||||| ||||| || |||||||| Sbjct 110803 ACCATTGATAATGTTAAGTCAAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAGCAG 110744 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || ||||| || ||||| | |||||||| |||||||| || Sbjct 110743 AGGTTGATCTTTGCGGGGAAGCAGCTGGAGGATGGGCGTACTCTTGCAGATTATAATATC 110684 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || |||||||||||| Sbjct 110683 CAGAAGGAGTCTACTCTGCATCTTGTT 110657 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| ||||| || ||||| ||||| | ||||| ||||| || || Sbjct 111091 CAAATCTTTGTGAAAACCCTCACTGGCAAAACAATCACTTTAGAGGTTGAAAGTTCTGAT 111032 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||| ||||| || || ||||| || ||||| || Sbjct 111031 ACGATTGATAATGTGAAGGCAAAGATTCAAGACAAGGAGGGTATCCCCCCAGACCAACAG 110972 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | ||||| || || || |||||||| |||||||| | ||||||||||| || ||| || Sbjct 110971 AGGCTTATTTTTGCAGGCAAACAGCTTGAAGATGGCCGCACTCTTGCCGACTACAACATC 110912 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || || || || || Sbjct 110911 CAGAAAGAATCCACCCTTCACCTCGT 110886 Score = 147 bits (162), Expect = 5e-30 Identities = 158/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| ||||| || || || || ||||| | ||||| ||||| || || Sbjct 111319 CAAATATTTGTGAAGACTCTTACCGGCAAGACTATCACTTTGGAGGTTGAAAGTTCTGAT 111260 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| |||||||| ||||||||||| || |||||||| Sbjct 111259 ACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCCGACCAGCAG 111200 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || |||||||| |||||||| | |||||||| || || || || Sbjct 111199 AGGTTGATTTTTGCAGGTAAACAGCTTGAAGATGGCCGCACTCTTGCAGACTACAATATC 111140 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||| ||||| || |||| |||| || Sbjct 111139 CAAAAGGAATCCACTTTGCA-CTTGGTT 111113 >seq347 Length=438793 Score = 178 bits (196), Expect = 3e-39 Identities = 163/205 (80%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| ||||| || ||||| ||||| |||||||| || ||||| ||| Sbjct 270816 CAGATCTTTGTAAAAACCCTCACTGGCAAAACCATCACTCTCGAGGTTGAGAGCTCTGAC 270757 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| ||||| |||||||| ||||||||| Sbjct 270756 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCAGACCAGCAA 270697 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||||||||| || || || ||||| || | |||||||| ||||||||| || Sbjct 270696 AGGTTGATCTTCGCCGGTAAGCAACTTGAAGACGGCCGCACTCTTGCTGATTATAACATC 270637 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 270636 CAAAAGGAGTCCACCCTCCA-CTTG 270613 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| || || || || || ||||| | ||||| ||||| || ||| Sbjct 270360 CAAATCTTTGTGAAAACCCTTACTGGCAAGACAATCACTTTAGAGGTTGAAAGTTCTGAC 270301 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || || || |||||| || ||||| ||||| |||||||| |||||||| Sbjct 270300 ACGGTTGATAATGTTAAGGCAAAGATCCAAGACAAGGAAGGTATCCCTCCAGACCAGCAG 270241 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || |||||||| |||||||| | |||||||| || || ||| || Sbjct 270240 AGGCTTATCTTTGCAGGCAAACAGCTTGAAGATGGCCGCACTCTTGCTGACTACAACATC 270181 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || || || || Sbjct 270180 CAAAAAGAATCCACCCTTCACCTGGT 270155 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || |||||| | || |||||||| |||||||| ||||| || || || ||| Sbjct 270132 CAGATTTTTGTCAAAACTTTGACTGGAAAAACCATCACCCTTGAGGTTGAGAGTTCGGAC 270073 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||||||||||||| ||||| || || | || ||||| Sbjct 270072 ACCATTGAAAATGTAAAAGCAAAGATTCAGGACAAGGAAGGGATTCCACTAGATCAGCAG 270013 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || ||||| || ||||| | |||||||| |||||||| | Sbjct 270012 AGGTTGATCTTTGCAGGGAAGCAGCTGGAGGATGGGCGCACTCTTGCAGATTATAATATT 269953 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || |||||||||||| Sbjct 269952 CAGAAGGAGTCTACTCTGCATCTTGTT 269926 Score = 156 bits (172), Expect = 1e-32 Identities = 160/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||||||||| || || || |||||||| ||||| |||||||| ||| Sbjct 271044 CAGATCTTTGTAAAAACTCTCACTGGCAAGACCATCACCCTTGAGGTCGAAAGCTCTGAC 270985 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || ||||| ||||| ||||| || || || ||||| || || |||||| Sbjct 270984 ACAGTTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGGATCCCACCAGATCAGCAA 270925 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| || || |||||||| || ||||| | |||||||| || |||||| || Sbjct 270924 AGGCTTATCTTTGCTGGTAAACAGCTTGAGGATGGCCGCACTCTTGCTGACTATAACATC 270865 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || || ||||| || |||| || Sbjct 270864 CAGAAGGAGTCCACACTCCA-CTTGGTT 270838 Score = 140 bits (154), Expect = 8e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| ||||| || || || || ||||| | || || ||||| || || Sbjct 270588 CAAATCTTTGTGAAGACTCTTACTGGCAAGACTATCACTTTGGAAGTTGAAAGTTCTGAT 270529 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| |||||||| |||||||||||||| |||||||| Sbjct 270528 ACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCCGACCAGCAG 270469 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || |||||||| |||||||| | || ||||| || || || || Sbjct 270468 AGGTTGATTTTTGCAGGTAAACAGCTTGAAGATGGCCGTACCCTTGCGGACTACAATATC 270409 Query 178104 CAAAAAGAATCAACACTGCA 178123 ||||| ||||| || |||| Sbjct 270408 CAAAAGGAATCCACTTTGCA 270389 >seq181 Length=541317 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || ||||| ||||| ||||| ||| |||||| Sbjct 240657 CAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATCCTCAGAT 240716 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||| || || ||||| ||||| ||||| || ||||| ||| Sbjct 240717 ACCATCGACAACGTGAAGGCAAAAATCCAAGACAAGGAAGGCATCCCACCAGACCAACAA 240776 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| |||||||| || ||||| || ||||||| ||||| || ||| || Sbjct 240777 CGCCTCATCTTCGCTGGAAAACAACTTGAAGACGGCCGGACTCTCGCCGACTACAACATC 240836 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 240837 CAGAAGGAGTCGACGCTCCACCTCGT 240862 >seq4739 Length=93234 Score = 143 bits (158), Expect = 6e-29 Identities = 158/209 (76%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| || || || ||||| ||||| | || || || || || || Sbjct 55013 CAGATCTTTGTGAAAACCCTTACTGGTAAAACCATCACTTTGGATGTTGAGAGTTCTGAA 55072 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||| ||||| || || || ||||| ||||||||||| Sbjct 55073 ACTATTGACAATGTGAAGGCAAAGATCCAGGATAAGGAGGGTATCCCACCGGACCAGCAG 55132 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||| ||| | || |||||||||||||| | | |||||| ||||||||| | Sbjct 55133 AGGCTTATCTTTGCCAGTAAGCAGCTCGAAGATGGTCGTATTCTTGCTGATTATAACATT 55192 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 || || || |||||||| || |||| ||| Sbjct 55193 CAGAAGGAGTCAACACTTCA-CTTGGTTT 55220 Score = 91.5 bits (100), Expect = 4e-13 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || | | | || || ||||| || ||||| |||||||| || Sbjct 55697 CAGATTTTTGTGAAGACCTTGATGGTGAAGACCATCACTCTGGAGGTAGAAAGCTCGGAT 55756 Query 177984 ACCATCGAGAACGTCAAACAA--AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 || | || || || ||| |||||||||||||| || || | |||||||| |||| Sbjct 55757 ACTGTTGACAATGTAAAAAGGCTAAGATTCAGGACAACGAGGGGAATCCTCCGGATCAGC 55816 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| ||| || ||||| || ||||| | ||||| || |||||||| Sbjct 55817 AGAGGTTGATCTTTGCCATCAAGCAGCTGGAGGATGGGTGCACTCTGGCAGATTATAATA 55876 Query 178102 TCCA 178105 |||| Sbjct 55877 TCCA 55880 Score = 84.2 bits (92), Expect = 5e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || ||||||| |||||| | ||||||||||| |||| Sbjct 55241 CAAATATTTGTCAAGACGCATACTGGAAAAATCATCACCTTGGAGGTGGAAAGTGCAGAA 55300 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || || || || ||||| || ||| | || ||||| || ||| |||| Sbjct 55301 ACTGTTGATAATGTGAAGGCTAAAATTCAAGATAAAAAGGGGATCCCACCTGACTAGCAG 55360 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 | || ||||| | || |||| ||||| |||||||||| || || ||||| Sbjct 55361 AAGTTGATATTCGCTGCTAAGCAGCCTTAAGATTGAAGGACTCTGGCAGACTATAA 55416 >seq335 Length=478728 Score = 95.1 bits (104), Expect = 3e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 178012 AGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCG 178071 ||||||||||||| |||||||| || ||||| || | || || || |||||||| | | Sbjct 394737 AGGACAAAGAAGGTATCCCTCCTGATCAGCAGAGATTGATTTTTGCTGGAAAACAATTGG 394796 Query 178072 AAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 ||||||| | || ||||| || || || ||||||| || || ||||| || || || | Sbjct 394797 AAGATGGCCGAACCCTTGCTGACTACAATATCCAAAAGGAGTCGACACTTCACCTGGTGT 394856 Query 178132 TGAGACTCAG 178141 |||| || || Sbjct 394857 TGAGGCTTAG 394866 >seq5626 Length=69956 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||||||||||||||||||||| || | ||||| ||||| || |||||||| ||||| | Sbjct 51658 AGGAATCCCTCCGGACCAGCAGAGATTGATCTTTGCCGGTAAGCAGCTCGAGGATGGCCG 51717 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||| ||||| || ||| |||| |||| Sbjct 51718 TACTCTCGCCGACTACAACATCCAGAAAG 51746 >seq3080 Length=151407 Score = 86.0 bits (94), Expect = 2e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 254447 ATGAAGCATTGGGTTGCGTTCTCTGCGACTTTTCTCAAATAGTTGTGTCTTTTTTCTTTT 254506 |||||| | || || || |||||| ||||||| ||||||||| | |||||| | Sbjct 66989 ATGAAGAACTGTGTGGCAAGCTCTGCAGTCTTTCTCACATAGTTGTGCCGTTTTTCCATC 66930 Query 254507 CGAAGTCTTTCGAACCGGAGGGCTGACTGTCCTCCTCGACCGTGTTTCTTTGGGAGA 254563 ||||| | | ||||| | ||||||||||||||||| || ||||||||||| ||| Sbjct 66929 CGAAGACGAGCAAACCGCAAGGCTGACTGTCCTCCTCTTCCATGTTTCTTTGGTAGA 66873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203479700302558