Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq2448 109 5e-19 >seq2448 Length=870776 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || |||||| |||| || ||||| |||||| | ||||||||||| | Sbjct 350295 ATGCAGATTTTCGTGAAAACCCTAACTGGTAAAACCATAACCTTAGATGTCGAATCATCC 350354 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | ||| || || || | ||||||||| | || || || Sbjct 350355 GACACAATCGACAATGTCAAAATCAAGATCCAAGACAAAGAAGGCATCCCACCAGATCAA 350414 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| ||||| | ||| || |||||| |||||||| | || | ||||||| | Sbjct 350415 CAACGCTTAATCTTTGCTGGGAAACAATTGGAAGATGGAAGAACACTTGCAGATTACAAC 350474 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||||| || ||||||||||||| ||| | ||| | || || ||| Sbjct 350475 ATTCAGAAGGAATCCACGCTTCATTTGGTGCTTCGACTTCGTGGGGGT 350522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418288639484960