Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq758 150 4e-31 seq958 145 2e-29 seq1925 140 7e-28 seq2360 134 3e-26 seq1558 127 5e-24 seq2306 122 2e-22 seq2770 105 2e-17 seq2371 86.0 1e-11 >seq758 Length=475707 Score = 150 bits (166), Expect = 4e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| ||||| || || ||||| | || ||| | ||||| Sbjct 367591 AAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCGTC 367650 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || ||||| || ||||| || | ||||| || || || ||||||||||| || Sbjct 367651 TTCGAGCTGCTTTCCGGCGAAAATGAGGCGTTGTTGGTCTGGTGGGATTCCTTCTTTGTC 367710 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAG 104525 || ||||||||||| ||||| || | || || | ||| |||||||||||| || || | Sbjct 367711 TTGGATCTTTGCTTTGACATTGTCGATTGTGTC-CGAGGATTCTACCTCTAGGGTTATGG 367769 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 | ||||| || || ||||| || || ||||||||||| Sbjct 367770 TTTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 367806 >seq958 Length=433838 Score = 145 bits (160), Expect = 2e-29 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| |||||||| || ||||| | || ||| | || || Sbjct 311917 AAGAACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGCTAAAGTGCGGCCATC 311976 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || |||||||| || || || || | ||||| || || || || |||||||| || Sbjct 311977 TTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTC 312036 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAG 104525 ||| ||||| ||||| ||||| || | |||||| | ||| ||| || ||||| || || | Sbjct 312037 CTGGATCTTGGCTTTGACATTGTCGATGGTATC-CGAGGATTCGACTTCTAGGGTTATGG 312095 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 | ||||| || || ||||| || || ||||||||||| Sbjct 312096 TTTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 312132 >seq1925 Length=318408 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||||| | || || ||||| | || || || |||||||| || || ||| Sbjct 245614 ATTCCACCTCTTAAACGGAGCACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCA 245555 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | ||||| || || || ||||||||||| || || |||||||| || || Sbjct 245554 GCAAGGGTACGCCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCTGGG 245495 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || ||||| || | ||| ||||| || | ||| ||| ||| Sbjct 245494 GGAATGCCTTCCTTGTCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAGCTTTCA 245435 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| ||||| || || || ||||| |||||||| Sbjct 245434 ACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTAACAAAAATCTGCAT 245385 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | ||| || || || | || || || ||||| || || || ||| Sbjct 245158 ATGCCACCTCTTAAACGAAGAACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCA 245099 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||||| | || ||||| ||||| ||||||||||| || | |||||| || || || Sbjct 245098 GCAAGAGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGG 245039 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || ||||| || | ||| ||||| || | ||| || | || Sbjct 245038 GGAATACCTTCCTTGTCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCAGAATTCTCG 244979 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || |||||||| ||||| || || || ||||| |||||||| Sbjct 244978 ACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAAATCTGCAT 244929 Score = 114 bits (126), Expect = 3e-20 Identities = 156/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| |||||||| || ||||| | | ||| | ||||| Sbjct 246053 AAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCGTC 245994 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || ||||||||||| | |||||| || |||||||| |||||||| || || Sbjct 245993 CTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTC 245934 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||| ||||| | || ||||| || | || || || | || ||||| | || || | Sbjct 245933 CTGTATCTTAGTCTTGACATTATCGATAGTGTC-TGAGCTCTCGACCTCCAAGGTGATGG 245875 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 | || ||||| | || || |||||||| |||||| Sbjct 245874 TTTTCCCAGTCAAGGTCTTAACAAATATTTGCATT 245840 Score = 113 bits (124), Expect = 1e-19 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | || || || || | || || || ||||| ||||| |||||| Sbjct 244930 ATCCCTCCTCTAAGACGGAGAACAAGGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCA 244871 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || |||| || || || || || ||||||||||| || || | ||| || || || Sbjct 244870 GCGAGCGTTCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGG 244811 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || ||||| |||||||| | || ||||| || | ||| || | || Sbjct 244810 GGAATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTGTCGATGGTGTCAGAACTCTCA 244751 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || || || ||||| || || || || || ||||| Sbjct 244750 ACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACGAAGATTTGCAT 244701 Score = 111 bits (122), Expect = 4e-19 Identities = 170/239 (71%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| ||||| ||||||| | ||| || | || | |||||| || || ||||| || Sbjct 245849 TATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGAATGTT 245790 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||||| | || || || || || || || || || || ||||| || | || || || Sbjct 245789 GTAGTCTGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATCAATCTTTGCTG 245730 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||| || || || || || |||||||||||||| || || ||||| || | ||| || Sbjct 245729 ATCTGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTGTCGATGGTGTC-TG 245671 Query 104503 AGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || | || ||||| | || ||||| || ||||| | || || || || || |||||| Sbjct 245670 AGCTCTCAACCTCCAAAGTGATAGTTTTCCCAGTCAAAGTCTTGACGAAAATTTGCATT 245612 >seq2360 Length=898569 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| |||||||| | ||||| | || || || || || || || Sbjct 280727 GTAGACTCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCAAGCTGCTTCCCT 280668 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| |||||||| || || || || || || ||||||||||| ||||||| || Sbjct 280667 GCGAAAATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTATCCTGTATCTTTGTCTTC 280608 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| ||| || ||| || || | ||||| ||||| || || || || Sbjct 280607 ACATTCTCAATGGTGTCGGAAGTTTCAACTTCCAAGGTAATCGTCTTGCCTGTCAGAGTC 280548 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 280547 TTGACAAAGATCTGCAT 280531 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | |||||||| |||||||| || || |||| | |||| ||| || Sbjct 281426 AGAACAAGATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGCCAAGGTTCGACCATCC 281367 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || | ||| || || ||||| || ||||||||||| || || || || || || || ||| Sbjct 281366 TCCAATTGCTTCCCTGCAAAGATGAGCCTCTGTTGGTCTGGGGGGATACCCTCCTTGTCC 281307 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || ||||| || | ||||| || || ||||| || || |||||| Sbjct 281306 TGAATCTTGGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTC 281247 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || || |||||||| Sbjct 281246 TTCCCAGTGAGGGTCTTCACGAAGATCTGCAT 281215 Score = 114 bits (126), Expect = 3e-20 Identities = 166/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || || ||||| || ||||||||||| ||||| ||||| || ||| Sbjct 280988 ATGCCTCCTCTCAACCGGAGCACTAGGTGCAATGTAGATTCCTTCTGGATATTGTAATCA 280929 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | || || || | || || || ||||| || |||||||| || || || Sbjct 280928 GCCAATGTCCGGCCATCATCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTGGT 280869 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || ||||| ||||| ||||||||||||| || || | || | || || ||| | Sbjct 280868 GGGATTCCCTCTTTGTCCTGAATCTTTGTCTTAACGATATCGATAGTGTCAGAGCT---T 280812 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || ||||| || || || || || |||||||| Sbjct 280811 TCGACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 280759 >seq1558 Length=1070493 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || || || || | ||| || || || | || || || ||||| || || ||||| | Sbjct 239378 CCACCCCTGAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 239319 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 ||||| | |||||||| || |||||||| || || || || | ||| || || ||||| Sbjct 239318 AGAGTGCGGCCGTCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 239259 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || || || ||||| | || ||||| || | ||| || | ||| ||| Sbjct 239258 ATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCAACC 239199 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || || || ||||| || ||||| || ||||||||||| || Sbjct 239198 TCTAGGGTTATTGTTTTCCCAGTTAGGGTTTTCACGAATATCTGCATCTT 239149 >seq2306 Length=232912 Score = 122 bits (134), Expect = 2e-22 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| || || |||| || || | || || || || || || ||| Sbjct 176361 GTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCGAGCTGCTTACCA 176420 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||| || || || || || || || || ||||||||||| || ||| Sbjct 176421 GCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGAATCTTAGCCTTT 176480 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||||| | || | || ||||| || || || ||||| ||||| | || Sbjct 176481 ACATTATCAATTGTATC-CGAGCTCTCAACCTCCAGAGTGATGGTCTTGCCAGTCAAGGT 176539 Query 104542 TTTTACAAATATCTGCATT 104560 || ||||| ||||||||| Sbjct 176540 CTTCACAAAAATCTGCATT 176558 Score = 113 bits (124), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || || | | || || | ||| | || || || ||||| || || ||||| Sbjct 176784 ATTCCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 176843 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | ||| | ||| || || || || || ||||| ||||| | |||||| || || || Sbjct 176844 GCCAAAGTACGACCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGG 176903 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || ||||| || ||||||||||| | || ||||| || | ||| ||| || | || Sbjct 176904 GGAATACCTTCCTTGTCCTGAATCTTCGTCTTAACATTGTCAATGGTGTCG-GAGCTCTC 176962 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||| ||||| || ||||| || || || || |||||||| Sbjct 176963 AACCTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTTGACGAAAATCTGCAT 177013 >seq2770 Length=737149 Score = 105 bits (116), Expect = 2e-17 Identities = 146/202 (72%), Gaps = 7/202 (3%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| || |||| ||||| | || || || || || || ||| Sbjct 636309 GTCGACTCCTTCTGGATATTGTAATCAGCAAGAGTACGTCCATCCTCGAGCTGCTTCCCA 636368 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 | ||| || | | |||||||||| || || ||||| ||||| |||||||||| | || Sbjct 636369 GTAAAGATCAACTTCTGTTGATCCGGGGGGATTCCCTCTTTGCCCTGAATCTTGGTCTTA 636428 Query 104483 ACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGTGTAA-TAGTCTTACCAGTAAG 104538 ||||| || || || || ||| ||| ||||| | |||| | || || || || | Sbjct 636429 ACATTGTCGACAGTGTCAGAGCT---TTCAACCTCCAAGGTAAATTGTTTTCCCTGTCAA 636485 Query 104539 TGTTTTTACAAATATCTGCATT 104560 || ||||||||||| |||||| Sbjct 636486 AGTCTTTACAAATATTTGCATT 636507 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 104365 AGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGC 104424 ||| || ||||| || |||| || | || |||| || | || || ||||||||||| Sbjct 636529 AGACTCCTTCTGGATGCTATAATCCGCAAGGGTTCGGCCATTCTCAAGCTGTTTTCCAGC 636588 Query 104425 AAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484 || || || | ||| ||||| || || || || |||||||| ||||| || | || || Sbjct 636589 GAAGATCAGACGCTGCTGATCTGGGGGAATCCCCTCTTTATCTTGAATTTTGGTCTTAAC 636648 Query 104485 ATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544 ||| || | ||||| | || ||||| || || || | || ||||| || ||||| Sbjct 636649 ATTATCAATTGTATCAGAACTCTCGACCTCGAGAGTCATGGATTTGCCAGTTAGGGTTTT 636708 Query 104545 TACAAATATCTGCAT 104559 ||||| || ||||| Sbjct 636709 GACAAAAATTTGCAT 636723 Score = 91.5 bits (100), Expect = 3e-13 Identities = 136/191 (71%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || |||| |||||||||||| ||||||| | || | || || Sbjct 635881 AAGGACAAGGTGGAGGGTGGATTTTTTCTGAATATTGTAGTCAGCCAAGGTGCGTCCATC 635940 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| || || || || |||| ||||| || || || | || || ||||| || Sbjct 635941 CTCAAGTTGCTTCCCGGCGAAGATTAATCTCTGCTGGTCCGGGGAAATCCCCTCTTTGTC 636000 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT--ACCTCTAGTGTAATA 104524 ||| || || | ||| ||||| || || |||| || | ||| ||||| || || || Sbjct 636001 CTGGATTTTAGTTTTCACATTATCGACAGTAT--CTGAGCTCTAAACCTCCAGGGTGATG 636058 Query 104525 GTCTTACCAGT 104535 ||||| ||||| Sbjct 636059 GTCTTCCCAGT 636069 Score = 91.5 bits (100), Expect = 3e-13 Identities = 142/199 (71%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| | || || ||||| || || | || || || || || || || || || ||| Sbjct 636100 GTAGACTACTTTTGGATATTGTAATCCGCAAGGGTCCTCCCATCATCAAGCTGCTTCCCA 636159 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | ||| || || || | || || ||||| |||||||||||||| ||||| Sbjct 636160 GCAAATATCAACCTTTGCTGGTCCAGGGGAATACCTTCCTTATCCTGAATCTTGGCTTTG 636219 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | || ||||| | || |||||||| || || | || Sbjct 636220 ACATTATCAATCGTGTC-TGAGCTCTCAACCTCCAAAGTTATAGTCTTCCCTGTCA-AGT 636277 Query 104542 TTTTACAAATATCTGCATT 104560 || ||||| || |||||| Sbjct 636278 CTTAACAAAAATTTGCATT 636296 >seq2371 Length=888473 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515 |||||||| || || ||||| || || ||||| || | |||||| || ||| ||||| Sbjct 62871 CCTTCTTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCACTGCTTTCGACCTCA 62812 Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || ||||||||||| || ||||| || || |||||||| || Sbjct 62811 AGGGTGATGGTCTTACCAGTTAGGGTTTTCACGAAGATCTGCATCTT 62765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151353951344204