Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2360 149 6e-31 seq1925 132 4e-26 seq2306 131 2e-25 seq958 111 1e-19 seq2448 104 2e-17 seq758 102 7e-17 seq2371 95.1 1e-14 seq1558 95.1 1e-14 seq4 89.7 5e-13 seq2770 84.2 2e-11 >seq2360 Length=898569 Score = 149 bits (164), Expect = 6e-31 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || ||||||||||| || | ||| | |||||| ||||||||||| || | || | Sbjct 280993 TTTGCATGCCTCCTCTCAACCGGAGCACTAGGTGCAATGTAGATTCCTTCTGGATATTGT 280934 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| || || | ||| |||| ||| || || ||||||| | || ||||| | Sbjct 280933 AATCAGCCAATGTCCGGCCATCATCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGT 280874 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||| || || || |||||||| | ||| |||| ||| ||| ||| |||||||| | Sbjct 280873 CTGGTGGGATTCCCTCTTTGTCCTGAATCTTTGTCTTAACGATATCGATAGTGTCAGAGC 280814 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | ||||||||||||||||| ||||| ||||| || |||||||| Sbjct 280813 TTTCGACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 280759 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | ||||| |||| || ||||||||||| | ||| ||||| | Sbjct 281213 CCACCTCTGAGGCGGAGGACCAAATGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGCC 281154 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || |||||||||||| || || ||||||| | || ||||| || || ||| Sbjct 281153 AAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTGGA 281094 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || || || | ||| || | ||| || | | | || || | | || || Sbjct 281093 ATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCCGAGCTTTCAACT 281034 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | ||||| ||||| |||||||| || || |||||||| ||||||| Sbjct 281033 TCTAGGGTGATAGTTTTCCCAGTAAGCGTCTTAACAAAGATTTGCATGC 280985 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| || | || ||||| | || || |||||||| | ||| || ||| Sbjct 280529 CCACCCCTCAGACGGAGGACTAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCT 280470 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||| |||| ||| || || | ||||| | || ||||| || || || Sbjct 280469 AGAGTTCTGCCATCATCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGT 280410 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || || || | |||||| | |||||| | | |||||||| ||||| Sbjct 280409 ATACCCTCCTTATCTTGAATTTTGGTCTTGACATTCTCAATAGTGTCAGATGTCTCGACC 280350 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| || |||||||||||||| ||||| Sbjct 280349 TCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 280303 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| ||||| || | ||||| |||| |||||| ||||| || | |||||| || Sbjct 280757 CCTCCCCTCAAACGGAGAACCAAATGCAGAGTAGACTCCTTCTGAATGTTATAGTCTGCA 280698 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||| ||||| || || | || || | || ||||| ||||| || Sbjct 280697 AGAGTCCGGCCATCCTCAAGCTGCTTCCCTGCGAAAATAAGCCTCTGCTGGTCTGGTGGG 280638 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || ||||| || | || |||| ||| || | | ||||| | || || Sbjct 280637 ATCCCCTCTTTATCCTGTATCTTTGTCTTCACATTCTCAATGGTGTCGGAAGTTTCAACT 280578 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || || || || ||||| || |||||||||||||| Sbjct 280577 TCCAAGGTAATCGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 280531 >seq1925 Length=318408 Score = 132 bits (146), Expect = 4e-26 Identities = 174/240 (73%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 94769 AAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||||||| || || | ||||||||| | ||||| |||||||| | Sbjct 245852 AAATATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGAAT 245793 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || || | || | |||||| ||||| || || ||||||| |||||||| Sbjct 245792 GTTGTAGTCTGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATCAATCTTTG 245733 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||||||| ||||| || || || || | ||| || |||||||| | ||| ||||| Sbjct 245732 CTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTGTCGATGGTGTC 245673 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | ||||| ||||| ||||| | ||| || || || || ||||| Sbjct 245672 TGAGCTCTCAACCTCCAAAGTGATAGTTTTCCCAGTCAAAGTCTTGACGAAAATTTGCAT 245613 Score = 125 bits (138), Expect = 6e-24 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| | || | |||| ||| | || || || || || | Sbjct 245396 AAAAATCTGCATGCCACCTCTAAGACGGAGAACCAGGTGGAGGGTCGACTCTTTCTGGAT 245337 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| | |||| | |||||| |||||||||||| ||||||| || || || Sbjct 245336 GTTGTAATCAGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTG 245277 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||||||| ||||||||||| ||||| | ||||| | || || | | | || || Sbjct 245276 CTGATCTGGGGGAATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTGTCAATTGTATC 245217 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || |||| ||||| || || ||||| || || || |||||||||||||| Sbjct 245216 AGAGCTTTCAACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAGATCTGCAT 245157 Query 95008 GC 95009 || Sbjct 245156 GC 245155 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| || || | || | ||| | || || ||||| || | ||| ||||| Sbjct 245155 CCACCTCTTAAACGAAGAACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 245096 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| || || || ||||| ||||||| || || ||||| ||||| ||| Sbjct 245095 AGAGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 245036 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | |||||| | ||||| | | | ||||||| | ||||| Sbjct 245035 ATACCTTCCTTGTCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCAGAATTCTCGACC 244976 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || || ||||| || || || ||||| |||||||| Sbjct 244975 TCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAAATCTGCAT 244929 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || |||||||| || | ||| || || || |||| ||||||| ||| || || Sbjct 246037 GTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCGTCCTCCAACTGCTTACCA 245978 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||| || || || ||||| || |||||||| ||||| ||||| | || || | |||| Sbjct 245977 GCAAAAATCAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGTATCTTAGTCTTG 245918 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || ||| |||||| | | ||||| || | ||||||||||| ||||| | || Sbjct 245917 ACATTATCGATAGTGTCTGAGCTCTCGACCTCCAAGGTGATGGTTTTCCCAGTCAAGGTC 245858 Query 94991 TTCACAAAGATCTGCAT 95007 || ||||| || ||||| Sbjct 245857 TTAACAAATATTTGCAT 245841 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||||||| ||||| ||||||| | | ||||| ||||| ||||| || || || Sbjct 244856 ATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTT 244797 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | ||| || | ||| || | ||| ||||||| || || || | || || Sbjct 244796 ATCTTGAATCTTCGTCTTAACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGAGTTAT 244737 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||| |||||||| || || ||||| ||||| Sbjct 244736 GGTTTTTCCGGTAAGAGTCTTAACGAAGATTTGCAT 244701 >seq2306 Length=232912 Score = 131 bits (144), Expect = 2e-25 Identities = 171/234 (73%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || |||||| || | || | ||| | ||| | ||| || |||||||| | ||| || || Sbjct 177467 CATTCCTCCCCTGAGACGGAGCACAAGGTGGAGAGTTGACTCCTTTTGAATGTTGTAGTC 177526 Query 94837 -GCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 ||| || ||| | |||||||||||||||||| | ||||| | |||||||| || Sbjct 177527 AGCT---AGGGTTCGGCCGTCCTCCAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTC 177583 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953 ||| ||||| ||||| ||||| | || || | |||||| | | | ||||||| Sbjct 177584 TGGGGGAATTCCTTCCTTGTCTTGGATCTTAGTCTTGACATTGTCAATGGTGTCAGAACT 177643 Query 94954 GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | |||||||| ||||||||||| || ||||||||||| ||||| Sbjct 177644 CTCAACCTCGAGAGTGATGGTCTTTCCAGTAAGGGTCTTCACAAAGATTTGCAT 177697 Score = 123 bits (136), Expect = 2e-23 Identities = 172/238 (72%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||| || | || | ||| | ||| | ||| || ||||| || | ||| | Sbjct 177235 TTTGCATTCCTCCCCTAAGACGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGT 177294 Query 94833 AATC-GCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCT 94889 | || || || ||| | |||||| ||||| |||||| | ||||| | ||||||| Sbjct 177295 AGTCAGCG---AGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTTTGCT 177351 Query 94890 GATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAG 94949 | ||||| ||||| || || ||||| | |||||| ||||||||| | | | ||||| | Sbjct 177352 GGTCTGGGGGAATTCCCTCCTTGTCTTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGG 177411 Query 94950 CGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | ||||| || ||||| || || ||||| |||||||||||||| Sbjct 177412 AGCTTTCCACTTCGAGGGTGATTGTCTTTCCTGTTAGGGTTTTGACAAAGATCTGCAT 177469 Score = 107 bits (118), Expect = 2e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| | | || |||||| ||||| || | |||||| || | ||| || ||||| || | | Sbjct 176775 AAAATCTGCATTCCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATG 176834 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || ||| || ||| |||||| ||||| || || | || || || || ||| Sbjct 176835 TTGTAGTCGGCCAAAGTACGACCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGC 176894 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || ||||| ||||||||||| ||||| | ||| || | ||| || | | | ||||| Sbjct 176895 TGGTCTGGGGGAATACCTTCCTTGTCCTGAATCTTCGTCTTAACATTGTCAATGGTGTCG 176954 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | || ||||| || || ||||| || || || || |||||||| Sbjct 176955 GAGCTCTCAACCTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTTGACGAAAATCTGCAT 177013 >seq958 Length=433838 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| |||||||| || | ||| || ||| | |||| | ||| || ||||| Sbjct 311926 GTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCGAGCTG 311985 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 ||||||| | ||||| | | ||| || ||||| || || ||||||||||| | || || Sbjct 311986 TTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTCCTGGATCTT 312045 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 || ||||| | ||| || || | | ||||| || | || |||||||| || || Sbjct 312046 GGCTTTGACATTGTCGATGGTATCCGAGGATTCGACTTCTAGGGTTATGGTTTTACCCGT 312105 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| ||||||||||| Sbjct 312106 TAGGGTTTTCACGAAGATCTGCAT 312129 >seq2448 Length=870776 Score = 104 bits (114), Expect = 2e-17 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 ||| | |||||| || | || |||||||| || | ||| ||||| || |||||| Sbjct 350510 TCGAAGCACCAAATGAAGCGTGGATTCCTTCTGAATGTTGTAATCTG-CA-AGTGTTCTT 350453 Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 ||| |||| ||||| || |||||||||| | ||| |||||||| || || |||||| Sbjct 350452 CCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGGATGCCTTCT 350393 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 ||||| | || || ||||| | ||| ||||| | ||||| || | || Sbjct 350392 TTGTCTTGGATCTTGATTTTGACATTGTCGATTGTGTCGGATGATTCGACATCTAAGGTT 350333 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| ||||| || |||||||| || |||||||| Sbjct 350332 ATGGTTTTACCAGTTAGGGTTTTCACGAAAATCTGCAT 350295 >seq758 Length=475707 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| |||||||| || | ||| || ||| | |||| | || || ||||| Sbjct 367600 GTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCGTCTTCGAGCTG 367659 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 |||||| | || || | | ||| || ||||| || || ||||||||||| | || || Sbjct 367660 CTTTCCGGCGAAAATGAGGCGTTGTTGGTCTGGTGGGATTCCTTCTTTGTCTTGGATCTT 367719 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||| ||||| | ||| ||||| | | || || || | || |||||||| || || Sbjct 367720 TGCTTTGACATTGTCGATTGTGTCCGAGGATTCTACCTCTAGGGTTATGGTTTTACCCGT 367779 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| ||||||||||| Sbjct 367780 TAGGGTTTTCACGAAGATCTGCAT 367803 >seq2371 Length=888473 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 94818 CCTTT-TGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876 ||||| || | ||| |||||||| | ||| | || || ||||| ||| || | ||| Sbjct 99675 CCTTTCTGGATGTTGTAATCGCT-AGAGTACGGTCGTCTTCAAGCTGCTTTTCGGCGAAG 99617 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 || | | | ||||| || |||| ||||||||||||| ||||| ||||||||| | Sbjct 99616 ATGAGACGCAGTTGATCGGGTTGAATGCCTTCTTTGTCATGGATTTTAGCCTTGACGTTG 99557 Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996 | || ||| || || |||| ||||||||||| || ||||||||||||||| Sbjct 99556 TTAATGGTATCACTAGTTTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACA 99497 Query 94997 AAGATCTGCAT 95007 || || ||||| Sbjct 99496 AATATTTGCAT 99486 >seq1558 Length=1070493 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | || || ||||| || | ||| || ||| | |||| | || || Sbjct 239361 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTC 239302 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||||||| | ||||| | | ||||| |||||||| || ||||| ||||| | Sbjct 239301 AAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTG 239242 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || | ||| || | ||| ||||| | | || || || | || || ||||| Sbjct 239241 GATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCAACCTCTAGGGTTATTGTTTT 239182 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || |||||||| || |||||||| Sbjct 239181 CCCAGTTAGGGTTTTCACGAATATCTGCAT 239152 >seq4 Length=636788 Score = 89.7 bits (98), Expect = 5e-13 Identities = 85/106 (80%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 94903 ACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGT-CGACGT 94961 |||||| ||||| | ||| |||| ||||| | | | |||||| || || | | || | Sbjct 261480 ACCTTCCTTGTCTTGAATCTTTGTTTTGACATTGTCAATAGTGTC-GCTTGATTCAACTT 261422 Query 94962 CAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 261421 CAAGGGTGATGGTTTTCCCAGTAAGAGTTTTCACAAAGATCTGCAT 261376 >seq2770 Length=737149 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 94813 AGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCG 94870 ||| ||||| || | | ||||||| | || || ||| | || ||| ||||||||||| Sbjct 636529 AGACTCCTTCTGGATGCTATAATC-CGCA-AGGGTTCGGCCATTCTCAAGCTGTTTTCCA 636586 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | ||||||||||| ||||| || ||||| || | |||||| | ||| Sbjct 636587 GCGAAGATCAGACGCTGCTGATCTGGGGGAATCCCCTCTTTATCTTGAATTTTGGTCTTA 636646 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | || |||| ||||| || | || |||| ||| ||||| || ||| Sbjct 636647 ACATTATCAATTGTATCAGAACTCTCGACCTCGAGAGTCATGGATTTGCCAGTTAGGGTT 636706 Query 94991 TTCACAAAGATCTGCAT 95007 || ||||| || ||||| Sbjct 636707 TTGACAAAAATTTGCAT 636723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448274316232680