Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2306 172 1e-37 seq1925 167 4e-36 seq1558 165 2e-35 seq2360 158 2e-33 seq2770 129 1e-24 seq2371 120 6e-22 seq2797 111 3e-19 seq2858 100 5e-16 seq2792 100 5e-16 seq2570 100 5e-16 seq2437 100 5e-16 seq2412 100 5e-16 seq2404 100 5e-16 seq2222 100 5e-16 seq1814 100 5e-16 seq1536 100 5e-16 seq1270 100 5e-16 seq1047 100 5e-16 seq4 89.7 9e-13 seq2648 86.0 1e-11 >seq2306 Length=232912 Score = 172 bits (190), Expect = 1e-37 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || ||||| |||||||| || ||||| | || ||||| |||||||| Sbjct 176577 ACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCCGCAAGAGTCCTTCCATCTTCC 176636 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| ||||| || || | || || ||||| || || |||||||||||||| ||| Sbjct 176637 AGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGA 176696 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || |||||||| ||||||||||| | || || |||| ||| ||||| ||| Sbjct 176697 ATTTTCGCCTTGACATTGTCGATGGTGTCCGAACTCTCAACCTCCAGGGTAATGGTCTTT 176756 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | |||||||||||| ||||||||| Sbjct 176757 CCGGTCAAGGTCTTGACGAAAATCTGCATT 176786 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | ||| || | || | ||| || || ||||| || |||||||| || || | Sbjct 177241 TTCCTCCCCTAAGACGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAG 177300 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 ||| || | ||||| || | |||||| |||||||| || || ||||| ||||| || | Sbjct 177301 CGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGG 177360 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| || |||||||||||||| || ||||||||| || |||||||| | ||| | Sbjct 177361 GAATTCCCTCCTTGTCTTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCA 177420 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| | |||||| || ||||| || ||||| ||||| || ||||||||| Sbjct 177421 CTTCGAGGGTGATTGTCTTTCCTGTTAGGGTTTTGACAAAGATCTGCATT 177470 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || || |||||||| || |||||||| || || | Sbjct 177015 CCACCACGCAGACGGAGCACCAAATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCA 177074 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||||||| | |||||| |||||||| || | || |||||||| || ||| Sbjct 177075 AGGGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGTTGGTCTGGGGGA 177134 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| | |||||| || || || || | || ||| Sbjct 177135 ATACCCTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTATCGGAGCTCTCGACT 177194 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | ||||||||| || || ||||| |||||||| || || |||||| Sbjct 177195 TCGAGGGTGATGGTCTTCCCAGTGAGAGTCTTGACAAAGATTTGCATT 177242 Score = 143 bits (158), Expect = 5e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || |||||||| || |||||||| || |||| | || | ||||| || Sbjct 176805 ACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCG 176864 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || ||||| || | || || ||||| || ||||| ||||||||||| ||| Sbjct 176865 AGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGA 176924 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||| || || |||||||| | || || ||||| || ||||| || Sbjct 176925 ATCTTCGTCTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTAATGGTCTTC 176984 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||||||||| |||||||| Sbjct 176985 CCGGTAAGGGTCTTGACGAAAATCTGCAT 177013 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || || | || | ||| || || ||||| ||||| ||||| || || | Sbjct 177469 TTCCTCCCCTGAGACGGAGCACAAGGTGGAGAGTTGACTCCTTTTGAATGTTGTAGTCAG 177528 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || || | || || || | ||| || |||||||| || || ||||| ||||| || | Sbjct 177529 CTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGG 177588 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| |||||||||||||| ||||| | |||||| || |||||||| | || | Sbjct 177589 GAATTCCTTCCTTGTCTTGGATCTTAGTCTTGACATTGTCAATGGTGTCAGAACTCTCAA 177648 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | |||||||| ||||| || |||||||| || || || ||||| Sbjct 177649 CCTCGAGAGTGATGGTCTTTCCAGTAAGGGTCTTCACAAAGATTTGCAT 177697 >seq1925 Length=318408 Score = 167 bits (184), Expect = 4e-36 Identities = 163/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || ||||| ||||| ||||| || || | || ||||||||||| || Sbjct 245821 ACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCTGCAAGGGTCCTCCCATCCTCG 245762 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||||||| || || || | |||||| || || || |||||||| ||||| || ||| Sbjct 245761 AGCTGCTTCCCTGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTATCCTGA 245702 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||||| ||||||||||||| || || ||||| ||||| ||||| Sbjct 245701 ATCTTAGCCTTGACATTGTCGATGGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTTTTC 245642 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | ||||||||||| || |||||| Sbjct 245641 CCAGTCAAAGTCTTGACGAAAATTTGCATT 245612 Score = 147 bits (162), Expect = 4e-30 Identities = 158/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || || ||||| || || ||||| ||||| | || || | ||| || || | Sbjct 245592 CAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCGTCCTCAA 245533 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || || || ||||| |||||||| || |||||||||||||||||||||| Sbjct 245532 GCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAA 245473 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || | ||||| || |||||||| | ||| || || | ||||||||| || | Sbjct 245472 TTTTGGTTTTGACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTCC 245413 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||||| || || |||||||| Sbjct 245412 CAGTGAGGGTCTTAACAAAAATCTGCAT 245385 Score = 132 bits (146), Expect = 9e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || || || ||||| || || | Sbjct 246067 CCACCACGGAGACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 246008 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||| || || |||||||| || || || || | || || ||||| || ||| Sbjct 246007 AAAGTGCGCCCGTCCTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGAGGA 245948 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| | |||||| ||||| ||||||| || || Sbjct 245947 ATTCCTTCCTTGTCCTGTATCTTAGTCTTGACATTATCGATAGTGTCTGAGCTCTCGACC 245888 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||||||||||||| || || | |||||| || ||||| |||||| Sbjct 245887 TCCAAGGTGATGGTTTTCCCAGTCAAGGTCTTAACAAATATTTGCATT 245840 Score = 127 bits (140), Expect = 4e-24 Identities = 153/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || ||||| || |||||||| ||||| | || || | |||||||| | || Sbjct 245132 GTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCTTCAAGTTG 245073 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || | || || ||||| || ||||| ||||||||||||||||| || Sbjct 245072 CTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTT 245013 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT--ACTTCCAAGGTGATGGTTTTTCCC 68435 | ||||| || |||||||| | ||||| || || | |||||| || || || Sbjct 245012 GGTTTTGACATTGTCAATGGTGTCAGA--ATTCTCGACCTCAAGGGTGATAGTCTTCCCA 244955 Query 68436 GTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||||||| || || |||||||| Sbjct 244954 GTGAGGGTCTTAACAAAAATCTGCAT 244929 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | ||| || | || | ||| || || ||||| || ||||| || || || | | Sbjct 244927 CCTCCTCTAAGACGGAGAACAAGGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGCG 244868 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || ||| Sbjct 244867 AGCGTTCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGA 244808 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||||||||| | ||| || ||||||||||| | || || Sbjct 244807 ATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTGTCGATGGTGTCAGAACTCTCAACC 244748 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||||||||| || || ||||| ||||| || ||||| Sbjct 244747 TCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACGAAGATTTGCAT 244701 Score = 116 bits (128), Expect = 7e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || | ||| || | |||| ||| || || |||||||| |||||||| ||||| | Sbjct 245383 CCACCTCTAAGACGGAGAACCAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCAGCA 245324 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||| || ||||| || || | || || || || || ||| Sbjct 245323 AGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 245264 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||| || || | || || || || || || | ||| || Sbjct 245263 ATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTGTCAATTGTATCAGAGCTTTCAACC 245204 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || ||||||||||| || || |||||||| Sbjct 245203 TCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAGATCTGCAT 245157 >seq1558 Length=1070493 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || ||||| || |||||||| || |||| ||| || | || ||||| Sbjct 239360 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCA 239301 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || |||||||| ||||| | || ||||| || || ||||||||||||||||| Sbjct 239300 AGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGG 239241 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| | ||| || ||||||||||||| ||||| || || | ||| || ||||| Sbjct 239240 ATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCAACCTCTAGGGTTATTGTTTTC 239181 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| || |||||||||||||| Sbjct 239180 CCAGTTAGGGTTTTCACGAATATCTGCAT 239152 >seq2360 Length=898569 Score = 158 bits (174), Expect = 2e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || || || ||||| || ||||| | | ||||| ||||| || ||||||||||| Sbjct 280955 GTAGATTCCTTCTGGATATTGTAATCAGCCAATGTCCGGCCATCATCCAACTGCTTCCCT 280896 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 || || || || || || ||||| ||||| || || || ||||| |||||||||| ||| Sbjct 280895 GCAAAGATCAGCCTCTGCTGGTCTGGTGGGATTCCCTCTTTGTCCTGAATCTTTGTCTTA 280836 Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 ||| ||||| ||||| | ||| ||||||| ||||||||||||||| ||||| ||| Sbjct 280835 ACGATATCGATAGTGTCAGAGCTTTCGACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTC 280776 Query 68445 TTGACGAATATCTGCAT 68461 || ||||| |||||||| Sbjct 280775 TTCACGAAAATCTGCAT 280759 Score = 156 bits (172), Expect = 8e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 || ||||| || |||||||| ||||||||||| || |||| || || || ||||| || Sbjct 280511 ACTAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCTGCCATCATCC 280452 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||||||| || ||||| ||||| || || ||||| ||||| || || ||||| |||||| Sbjct 280451 AACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGTATACCCTCCTTATCTTGA 280392 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || | |||||| ||| || ||||| | || || || || | ||||||||| || Sbjct 280391 ATTTTGGTCTTGACATTCTCAATAGTGTCAGATGTCTCGACCTCGAGGGTGATGGTCTTG 280332 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| || || || || ||||| Sbjct 280331 CCAGTCAGGGTTTTCACAAAGATTTGCAT 280303 Score = 147 bits (162), Expect = 4e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || ||||| || || |||||||| || | || |||| ||||| || Sbjct 280739 ACCAAATGCAGAGTAGACTCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCA 280680 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||||||| ||||| || || || || ||||| ||||| || || || || || || Sbjct 280679 AGCTGCTTCCCTGCGAAAATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTATCCTGT 280620 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||||| ||| || ||| |||||||| | | ||| ||||||||||| || || || Sbjct 280619 ATCTTTGTCTTCACATTCTCAATGGTGTCGGAAGTTTCAACTTCCAAGGTAATCGTCTTG 280560 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || |||||||| || |||||||| Sbjct 280559 CCTGTCAGAGTCTTGACAAAGATCTGCAT 280531 Score = 136 bits (150), Expect = 7e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | ||||| || || || || || ||||||||||| ||||| | | ||||| Sbjct 281204 AGGCGGAGGACCAAATGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGCCAAAGTCCTG 281145 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | ||||||||| || || || | || || ||||| ||||||||||| ||| Sbjct 281144 CCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTGGAATGCCCTCC 281085 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || ||||||||||| | ||| || || || || || | ||| ||||| | |||| Sbjct 281084 TTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCCGAGCTTTCAACTTCTAGGGTG 281025 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| || || || ||||| || || || ||||| Sbjct 281024 ATAGTTTTCCCAGTAAGCGTCTTAACAAAGATTTGCAT 280987 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || || || || || || ||||| ||||| | Sbjct 281441 CCCCCACGAAGACGGAGAACAAGATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGCC 281382 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || || |||||||| || || ||||| || |||||||| || || Sbjct 281381 AAGGTTCGACCATCCTCCAATTGCTTCCCTGCAAAGATGAGCCTCTGTTGGTCTGGGGGG 281322 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| | ||| || ||| || || || | | || || Sbjct 281321 ATACCCTCCTTGTCCTGAATCTTGGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACC 281262 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || ||||||||||| ||||| |||||||| Sbjct 281261 TCGAGGGTGATAGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCAT 281215 >seq2770 Length=737149 Score = 129 bits (142), Expect = 1e-24 Identities = 159/216 (74%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 |||| ||||||| || || |||| |||||||| || ||||| | || ||||||||| Sbjct 636082 CGCAGCACCAAGTAAAGGGTAGACTACTTTTGGATATTGTAATCCGCAAGGGTCCTCCCA 636141 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 || || | ||||||||| || ||||| | ||||| ||||| | ||||| |||||||| Sbjct 636142 TCATCAAGCTGCTTCCCAGCAAATATCAACCTTTGCTGGTCCAGGGGAATACCTTCCTTA 636201 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || |||||||| || ||||| || || ||||||| || || ||||| || || Sbjct 636202 TCCTGAATCTTGGCTTTGACATTATCAATCGTGTCTGAGCTCTCAACCTCCAAAGTTATA 636261 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || || | ||||| || || || |||||| Sbjct 636262 GTCTTCCCTGTCA-AGTCTTAACAAAAATTTGCATT 636296 >seq2371 Length=888473 Score = 120 bits (132), Expect = 6e-22 Identities = 142/191 (74%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331 |||| |||||||| |||||| || || | | ||||| | |||||| ||||||| | Sbjct 99674 CTTTCTGGATGTTGTAATCGCT-AGAGTACGGTCGTCTTCAAGCTGCTTTTCGGCGAAGA 99616 Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 |||| | |||| |||||| |||||||||| ||||| || || || ||||||||| | Sbjct 99615 TGAGACGCAGTTGATCGGGTTGAATGCCTTCTTTGTCATGGATTTTAGCCTTGACGTTGT 99556 Query 68392 CGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 ||||| || | ||| || || | |||||||||||| ||||| || || || || | Sbjct 99555 TAATGGTATCACTAGTTTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACAA 99496 Query 68452 ATATCTGCATT 68462 |||| |||||| Sbjct 99495 ATATTTGCATT 99485 >seq2797 Length=99474 Score = 111 bits (122), Expect = 3e-19 Identities = 256/378 (68%), Gaps = 6/378 (2%) Strand=Plus/Minus Query 173102 ATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAACTCG 173161 ||||| |||||||||||||||||||| || |||||||| ||||| || || ||||| | | Sbjct 44479 ATTGATACGATTATGCACTTTGCTGCACAAACCCATGTTGACAATTCTTTTGGTAA-TAG 44421 Query 173162 C-TGGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGAGGCT 173220 | | | || |||| ||||||| | || |||||||| || ||||| ||| | | | | Sbjct 44420 CTTTGAGTTCACCAAGAACAACATTTATGGGACCCATGTCCTCCTAGAAGCCTGTAAGGT 44361 Query 173221 CTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGAGAGCAG 173280 | || | | | |||||| |||| |||||| || || ||||| |||| ||| Sbjct 44360 CACCGGGCAAATTAGGAGATTCATCCATGTTAGTACCGATGAGGTTTACGGAGAGA-CAG 44302 Query 173281 -TCTGGGCAAAAAAGAAGGCCTCGATGAACACTCGTCCCTCGAGCCAACAAACCCATATG 173339 | || | || ||||| || || |||||||| ||||| Sbjct 44301 ATGAGGATGCTGTTGTGGGTAATCATGAAGCTTCTCAGCTTCTTCCAACAAATCCATACT 44242 Query 173340 CAGCAGCCAAGGCTGGTGCCGAAATG-ATGGCACGTGCATATCACACATCGTACAAGCTA 173398 | || | || |||||||| || ||| || || | || ||| || ||| || | Sbjct 44241 CTGCTACAAAAGCTGGTGCTGAGATGCTTGTCATG-GCTTATGGCAGATCATATGGTTTG 44183 Query 173399 CCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCCGAAAAAATG 173458 ||||| || || || || ||||||||||||||||| | ||||| || || ||| || Sbjct 44182 CCAGTTATTACAACCCGTGGAAACAATGTGTATGGCCCTAACCAGTTTCCTGAGAAATTG 44123 Query 173459 ATCCCAAAATTTATTCTT 173476 |||||||| || |||||| Sbjct 44122 ATCCCAAAGTTCATTCTT 44105 >seq2858 Length=91760 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 58195 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 58136 Query 84516 CCCAC 84520 ||||| Sbjct 58135 CCCAC 58131 >seq2792 Length=1552922 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 1471881 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1471940 Query 84516 CCCAC 84520 ||||| Sbjct 1471941 CCCAC 1471945 >seq2570 Length=1555044 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 1273187 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1273128 Query 84516 CCCAC 84520 ||||| Sbjct 1273127 CCCAC 1273123 >seq2437 Length=876605 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 234627 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 234686 Query 84516 CCCAC 84520 ||||| Sbjct 234687 CCCAC 234691 >seq2412 Length=189564 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 71337 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 71278 Query 84516 CCCAC 84520 ||||| Sbjct 71277 CCCAC 71273 >seq2404 Length=885034 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 758497 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 758438 Query 84516 CCCAC 84520 ||||| Sbjct 758437 CCCAC 758433 >seq2222 Length=2461652 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 1473059 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1473000 Query 84516 CCCAC 84520 ||||| Sbjct 1472999 CCCAC 1472995 >seq1814 Length=331508 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 279050 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 279109 Query 84516 CCCAC 84520 ||||| Sbjct 279110 CCCAC 279114 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 280007 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 280066 Query 84516 CCCAC 84520 ||||| Sbjct 280067 CCCAC 280071 >seq1536 Length=361900 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 361587 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 361646 Query 84516 CCCAC 84520 ||||| Sbjct 361647 CCCAC 361651 >seq1270 Length=387263 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 215478 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 215419 Query 84516 CCCAC 84520 ||||| Sbjct 215418 CCCAC 215414 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 219627 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 219568 Query 84516 CCCAC 84520 ||||| Sbjct 219567 CCCAC 219563 >seq1047 Length=417705 Score = 100 bits (110), Expect = 5e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 266072 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 266131 Query 84516 CCCAC 84520 ||||| Sbjct 266132 CCCAC 266136 >seq4 Length=636788 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 |||||||||||||||||||||| ||||| || || ||||| |||||| ||||| Sbjct 261479 CCTTCCTTGTCTTGAATCTTTGTTTTGACATTGTCAATAGTGTCGCTTGATTCAACTTCA 261420 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||||||||| || || || || || || || |||||||| Sbjct 261419 AGGGTGATGGTTTTCCCAGTAAGAGTTTTCACAAAGATCTGCAT 261376 >seq2648 Length=778764 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| ||||||||| || |||||||| |||||||||||||||||||||| |||||| | Sbjct 525658 GCCCGTCTAGCTCAGTTGGTAGAGCGCATGGCTCTTAACCTTGTGGTCGTGAGTTCGAAC 525599 Query 84516 CCCAC 84520 ||||| Sbjct 525598 CCCAC 525594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921587689396360