Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2448 87.8 1e-12 >seq2448 Length=870776 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/225 (69%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || ||||||| |||||||||| ||||||||||||||||||||||| | | || Sbjct 350512 AGTCGAAGCACCAAATGAAGCGTGGATTCCTTCTGAATGTTGTAATCTGCAAGTGTTCTT 350453 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || |||||||| || || ||||| || | ||| || ||||| || | || ||| Sbjct 350452 CCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGGATGCCTTCT 350393 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACT---CACACTATCAGTAGATTCGCATTCGACC 34086 ||||| | | ||| || || | | | | || | |||||| || | Sbjct 350392 TTGTC--TTGGATCTTGATT-TTGACATTGTCGATTGTGTCGGATGATTCGACATCTAAG 350336 Query 34087 GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTT 34131 ||||| ||||| || ||||| |||||||| || || ||||| ||| Sbjct 350335 GTTATGGTTTTACCAGTTAGGGTTTTCACGAAAATCTGCATATTT 350291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397047819496426