Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq1325 562 4e-155 seq1658 518 4e-142 seq2002 482 3e-131 seq2646 93.3 5e-14 seq936 91.5 2e-13 seq1113 82.4 9e-11 >seq1325 Length=385796 Score = 562 bits (622), Expect = 4e-155 Identities = 722/989 (73%), Gaps = 5/989 (1%) Strand=Plus/Minus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 ||| || ||||| |||||||||| ||||||||||| || ||||| |||||||| |||| Sbjct 7970 AGCGGCTAGGTCTTGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAA 7911 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 |||| |||| | | || ||||| || | | ||||||||||||| ||||| | Sbjct 7910 GTTAGCATGGTTAATGATATCAGCCCAAGTATGAATTACACGACCTTGACTATCAACTAC 7851 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 || |||||||| |||||||| || | |||||| ||||| || |||| ||| | |||||| Sbjct 7850 AGATTGGTTGAAATTGAAACCATTTAAGTTGAAGGCCATAGTACTAATACCTAAAGCAGT 7791 Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773 ||||| || || || || ||||| || || | ||||||| | | ||||| |||||||| Sbjct 7790 AAACCAAATACCTACTACAGGCCAAGCAGCTAAGAAGAAG-GTAAAGAACGAGAGTTGTT 7732 Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833 ||| ||| ||||| ||||||| || || || || || |||||||| || || || || Sbjct 7731 GAAACTAGCATATTGAAAGATCAATCGGCCGAAATAACCATGAGCAGCTACAATATTATA 7672 Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893 || ||||| ||||| | ||| | ||||| | || || ||| | |||||||| Sbjct 7671 AGTTTCTTCCTCTTGCCTGAATCTGTAACCCTCATTAGCAGATTCATTTTATGTGGTTTC 7612 Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953 | | || | ||| ||||| | ||||||||||| ||||| | ||||| || | || Sbjct 7611 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTATAAAGAGAGCCTTCGAA 7552 Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013 |||||||| || || | |||| | || || ||||| |||||||||||||| || ||||| Sbjct 7551 CACACCAGCTACACCTAACATGCGAAATGGATGCATAAGGATGTTGTGCTCAGCCTGGAA 7492 Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073 |||| ||| ||||||| |||| |||||| || ||||||||| | ||||| || || Sbjct 7491 TACAATCATAAAGTTGAAAGTACTAGAGATTCCTAGAGGCATACCATCAGAAAAGCTTCC 7432 Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133 |||||| | | |||| | ||| ||| ||| || || ||||| ||||| || ||||| Sbjct 7431 TTGACCAATTAGGTAGATCAAGAAAACAACAGTAGCCGCTGCAACCGGAGCTGAATATGC 7372 Query 8134 TACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193 ||| ||||| || |||||||| |||||| || ||||||||||||||||||||| || Sbjct 7371 AACATCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 7312 Query 8194 TGCAT-AGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGA 8252 ||| | ||| | | |||| | | || |||| ||||||| |||||||| | Sbjct 7311 -ACATGCTACACCAAGTAAAAAGTTTAGAACAATTAGTTCATAAGGACCTCCGTTGTATA 7253 Query 8253 GCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAG 8312 ||||||||||| || ||||||||||| || ||||| ||||| | || ||||| || Sbjct 7252 ACCACTCATCAACCGACGCTGCTTCCCATATTGGATAAAAGTGCAACCCTATAGCTGCAG 7193 Query 8313 AAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGG 8372 ||| ||||| || ||||| || || || ||||| || || | || || || | || Sbjct 7192 AAGTAGGAATAATGGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGACCCGGAAACAA 7133 Query 8373 GTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAA 8431 ||||||| || || ||||| || || |||||||||| | ||| || | || || ||| Sbjct 7132 GTTCACGAATACCATCAATATCTACTAGAGGAGCAGCAATGAAGGCTAAAATAAATACAG 7073 Query 8432 ATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGA 8491 | || |||| | | || || ||||||| ||||| ||||| || | ||| |||| Sbjct 7072 A-AGTTGCAGTCAATAAGGTTGGGATCATCAAAACACCAAACCATCCAATATAAAGACTG 7014 Query 8492 TTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 || || ||| ||||| | |||||||||| Sbjct 7013 TTTTTAGTGTTGGTTATCAAGTTACAGAA 6985 >seq1658 Length=355568 Score = 518 bits (574), Expect = 4e-142 Identities = 711/989 (72%), Gaps = 12/989 (1%) Strand=Plus/Plus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 ||| || ||||| ||||||||||| ||||||||||| || ||||| |||||||| ||||| Sbjct 186930 AGCGGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 186989 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 ||||||||| | | || ||||| || || | ||||||||||||| ||||| | Sbjct 186990 GTTAGCACGGTTAATGATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTAC 187049 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 || |||||||| |||||||| || | |||||| ||||| || |||| ||| | |||| | Sbjct 187050 AGATTGGTTGAAATTGAAACCATTTAAGTTGAAGGCCATAGTACTAATACCTAAAGCAAT 187109 Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773 ||||| || || || || ||||| || || | ||||||||| | ||||| |||| ||| Sbjct 187110 AAACCAAATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAGTAGTT 187169 Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833 ||| || ||||| ||||||| || | || || || |||||||| || || || || Sbjct 187170 GAAACTAGTATATTGAAAGATCAATCGGGCGAAATAACCATGAGCAGCTACAATATTATA 187229 Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893 || ||||| ||||| ||||| | ||||| | || || ||| || |||||||| Sbjct 187230 AGTTTCTTCCTCTTGCCCGAATCTGTAACCCTCATTAGCAGATTCATTTTCTGTGGTTTC 187289 Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953 | || || | ||| |||| | ||||||||||| ||||| | ||||| | || || Sbjct 187290 CCTAATCAAACTAGAAATTACCAAGGAACCATGCATAGCACTAGAAAGAGAGCGGCCGAA 187349 Query 7954 --------GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCT 8005 | ||||||| || || | |||||| || || ||||| |||||||||||||| Sbjct 187350 TACACCAGGTCACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCA 187409 Query 8006 GCTTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAG 8065 || | ||| |||| ||| ||||||| ||||||||||| | ||||||||| | ||| | Sbjct 187410 GCCTAGAATACAATCATAAAGTTGAAAGTACCAGAGATTTCTAGAGGCATACCATCATAA 187469 Query 8066 AAAGAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCA 8125 || |||||||| | || |||| | ||| ||||||| || || |||| |||| Sbjct 187470 AATCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCCGCTGCAATCAGAGCT 187529 Query 8126 GAGTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGA 8185 | ||||| ||| ||||| || ||||||||||||||| || |||||||||||||||| Sbjct 187530 AAATATGCAACAACAATCCAAGGGCGCATACCTAGACGGAAACTAAGTTCCCACTCACGA 187589 Query 8186 CCCATGTATGCAT-AGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACC 8244 ||||| || ||| | ||| | | ||||| | | || |||| |||||||||| Sbjct 187590 CCCATATA-ACATGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACC 187648 Query 8245 GTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAAT 8304 |||||| | ||||||||||| | || ||||| || || ||||| ||||| | || | Sbjct 187649 GTTGTATAACCACTCATCAACCAACGCCGCTTCTCATATTGGATAAAAGTGCAACCCTAC 187708 Query 8305 AGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACC 8364 | | | ||| ||||| || | ||| || || || || || || || | || || || Sbjct 187709 AACTGCAAAAGTAGGAATAATGGTACCCGAAATAATATTCTTTCCGTAAAGTAGAGACCC 187768 Query 8365 AGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGAT 8424 | || |||||||| || || ||||| || | |||||||||| | ||| || | || Sbjct 187769 GGAAACAGGTTCACGAATACCATCAATATCTAATAGAGGAGCAGCAATGAAGGCTATAAT 187828 Query 8425 GAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACAT 8483 || ||| | || |||| | | ||||| ||||||| ||||| ||||| || | || Sbjct 187829 AAATACAGA-AGTTGCAGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATAT 187887 Query 8484 ACAGACGATTGTTGGTGGAGGTTACCCAG 8512 | ||||| || | ||| |||| |||| Sbjct 187888 AAAGACGGTTTTCAGTGCTAGTTATCCAG 187916 >seq2002 Length=1023113 Score = 482 bits (534), Expect = 3e-131 Identities = 720/1015 (71%), Gaps = 5/1015 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || ||||| |||| || ||||||||| || ||||| Sbjct 168439 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 168380 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | |||||| || || || || || ||||| ||||| || Sbjct 168379 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAAAGTT 168320 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || |||| |||||||| || | ||| Sbjct 168319 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAATGAAGTCATAGGCACGTAGG 168260 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || | || | ||| | | |||| | |||| | ||| | || || ||||| Sbjct 168259 TTCAAAGCCATACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTACAAAT 168200 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 | |||||||||||||| ||||| |||||| || || | ||||| || || ||||| Sbjct 168199 AACATAAAGAAATGTAACCAACATTTATTGGAAAAAGCAACGCCAAAAATTTGGGACCAA 168140 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || || ||||| |||||||| ||||| || || || |||| || || | ||| ||| | Sbjct 168139 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGGGTTGGGTTAAAAGCCCGG 168080 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| ||||| |||||||| ||| |||| ||||| ||||| || |||||| Sbjct 168079 AATGTATTTGCCCCATCACCGTCTTCAAATAAATTATTTTCTACGGTAGCGCCATGAATA 168020 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 || || || | || | || || | ||| || || |||||||||||||| || || || Sbjct 168019 GCGCATAGTAGAGCGGCGCCCAATACACCGGCAACTCCCATCATATGAAATGGATTCAGT 167960 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | ||||| | ||| || ||||| ||||| | |||||| Sbjct 167959 GTCCAATTATGAAACCCTTGAAAAAAGAGAATGAATCGAAATATAGCTGCTATACCAAAA 167900 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 || ||||||||||||| ||||| || || ||||| || || || ||||| ||||| Sbjct 167899 CTAGGTGCAAAGAACCAACCAGACTGACCTAGTGGATAAATTAGGAATACAGAAACAAAA 167840 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 |||||||| |||||||| || ||||||||||| || || || | | || || || || Sbjct 167839 ACAGCAATTGGACCAGATAATGCGATTGCATTATAAGGGCGCA-ATTGAACGGATCGAGC 167781 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | ||| || || || | ||| ||||||||||| || || || || || || || ||||| Sbjct 167780 AAGCTCGAATTGACGTAACATAAAACCTATAAGTGCGAAAGCACCATGAAGAGCAACAAA 167721 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || ||| || || || | ||| ||| || || ||||| || ||||| |||||||| Sbjct 167720 AGTCCACAGGCCGCCTAATTGACACCAACGAGTAAAGTCTCCTTGTGCTTCGGGACCCCA 167661 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 || | | || || || | | | | ||||||||| || || | || || | ||| Sbjct 167660 CAGTAACAATAAAGAGTGGGCTAAACTATTAGCAGGAGTAGAAACTGTCGCGGTTAAGAA 167601 Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161 ||| || || || | ||| ||| || | || || || ||||| || || || || Sbjct 167600 ATTGCAACCTTCCAAATAAGAACTGGCCAATCCATGGGTATACCATGAAGTTACAAAGGT 167541 Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221 ||| || || | |||||| || | || | |||||| | | || || | || || || Sbjct 167540 TGTACCTGTAAACCAACCTCCTAAGGCGAAATAAGCA-CACGAAAGAGCAATAGCCCAGA 167482 Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTAC-ATCAAA 7275 |||||| ||||||||||| | || | | | ||||||||| | ||| |||||| Sbjct 167481 CCAACCTACAAAAACGAAACGGTCCCTCCGTAACCAGTCATCCA-TACTATCAAA 167428 >seq2646 Length=128401 Score = 93.3 bits (102), Expect = 5e-14 Identities = 183/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 10203 TCAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATC-GCTCGTGGGATAAGAAA 10261 ||||||||| ||| |||| |||| | | | ||||| || | ||| ||| ||||||| Sbjct 24233 TCAGTAAAGATCACCCTCCTTGTGGGTATGGATTACACAGTCTGATCGCGGG-TAAGAAA 24175 Query 10262 CACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTT 10321 |||| || || | |||| || || || | ||||||||||| ||| |||| | Sbjct 24174 CACAAGTGAGCAAATAACCTTTCTCCATTTGATTGTCATCAAGGAAGGATCCATCGGACT 24115 Query 10322 GATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACG 10381 |||| || || || | || | || ||||| | || |||||||| || | ||| | Sbjct 24114 GATCAACTGTTCCACTTACAAGCTGACCAGCACAGGTTGAGCAGGCACCTGCCCTGCATG 24055 Query 10382 AGTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAGCAC 10441 |||| | ||||| ||| |||||||| ||||| || ||||| ||| || ||| Sbjct 24054 AGTAAGGCAAGTCAACCCCTTTGTCTTCAGCTGCATCGAGGATGTAAGTATCATCCGCAG 23995 Query 10442 ACTCAAAAGTAGTTTCAGTTCCATCGGG 10469 |||||| | ||| |||||||| || Sbjct 23994 CCTCAAATTCATGTTCTGTTCCATCTGG 23967 >seq936 Length=443095 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/245 (69%), Gaps = 1/245 (0%) Strand=Plus/Minus Query 10204 CAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACA 10263 |||||| | || ||||| |||| | |||||| | ||| || || |||| | || Sbjct 203695 CAGTAA-GCTCCTCCTCCTTGTGAGTCTCAATGGTAACATCACTAACAGGGTAAGCAGCA 203637 Query 10264 CAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGA 10323 || || |||| | |||||| | |||||||||||||| | ||| |||||||| || Sbjct 203636 CAAGTAAGAACCCATCCAGCAGCTATCTGGTCATCATCTAAGAAGGATTGATCAGACTGG 203577 Query 10324 TCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAG 10383 || | ||||| || | || | || || || || || | ||||| | |||||| Sbjct 203576 TCGAGAGTACCAGACTTAAGCATACCGGCGCATGAGGAGCACGAGCCAGCCCTACACGAG 203517 Query 10384 TAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAGCACAC 10443 || | ||||| ||| | |||||||||||||||| | |||| ||| || | ||| Sbjct 203516 TAAGGCAAATCAATCCCTACCTCTTCAGCAGCATCCAAGACGTACACATCATCCGGGCAC 203457 Query 10444 TCAAA 10448 ||||| Sbjct 203456 TCAAA 203452 >seq1113 Length=2548689 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 8099 ACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCT 8158 ||||||| || | ||||| ||||| || ||||| ||| || || || |||||||| Sbjct 1750537 ACAGCAGTAGCCACTGCAACCGGAGCTGAATATGCGACAACAATTCAAGGGCGCATACCC 1750596 Query 8159 AGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193 |||||| || ||||||||||||||||||||| || Sbjct 1750597 AGACGGAAACTAAGTTCCCACTCACGACCCATATA 1750631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622101369224720