Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq758 147 5e-30 seq1558 143 6e-29 seq2360 138 3e-27 seq2306 138 3e-27 seq958 138 3e-27 seq1925 134 3e-26 seq2770 113 1e-19 seq2371 107 5e-18 seq2448 91.5 3e-13 >seq758 Length=475707 Score = 147 bits (162), Expect = 5e-30 Identities = 169/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| |||||||| ||||| |||| ||||||||| || ||||| Sbjct 367583 CGAAGACGAAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCTAAAGTG 367642 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| ||||||||||||||||| ||||| || || ||||| || |||||| Sbjct 367643 CGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGGCGTTGTTGGTCTGGTGGGATTCCT 367702 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || |||||| || || |||| ||||| | | |||||| || | Sbjct 367703 TCTTTGTCTTGGATCTTTGCTTTGACATTGTCGATTGTGTCCGAGGATTCTACCTCTAGG 367762 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || |||||||| || |||||||| || || || |||||| Sbjct 367763 GTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTG---CATTTT 367806 Score = 91.5 bits (100), Expect = 3e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || || ||||||||||||||| | ||||| || | ||||| ||||| |||||| ||||| Sbjct 367677 CTCATTTTCGCCGGAAAGCAGCTCGAAGACGGCCGCACTTTAGCCGACTACAACATCCAG 367618 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || || ||||||||||||||| | | ||||| Sbjct 367617 AAGGAATCGACTCTTCACCTTGTTCTTCGTCTTCG 367583 >seq1558 Length=1070493 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| || | ||| | || ||| Sbjct 239363 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCT 239304 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| ||||||||||||||||||||||||||||| ||| || ||||| || Sbjct 239303 TCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCT 239244 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||||| | ||| || || | || || || Sbjct 239243 TGGATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCAACCTCTAGGGTTATTGTT 239184 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || |||||||| || || || Sbjct 239183 TTCCCAGTTAGGGTTTTCACGAATATCTG 239155 >seq2360 Length=898569 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | |||||| || ||||||||||||| ||||||||| || | ||| || ||||| Sbjct 280514 AGGACTAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCTGCCATCA 280455 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || ||||||||||| | |||||||||||| || || || || Sbjct 280454 TCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGTATACCCTCCTTATCT 280395 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| || || | ||||| | ||| || || || | ||||| ||| Sbjct 280394 TGAATTTTGGTCTTGACATTCTCAATAGTGTCAGATGTCTCGACCTCGAGGGTGATGGTC 280335 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||||||||| ||||| Sbjct 280334 TTGCCAGTCAGGGTTTTCACAAAGATTTG 280306 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | || || ||||| |||| ||||| |||||||| |||| ||||| Sbjct 280970 AGCACTAGGTGCAATGTAGATTCCTTCTGGATATTGTAATCAGCCAATGTCCGGCCATCA 280911 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || || ||||| || | ||||||||| || ||||| ||| ||| Sbjct 280910 TCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATTCCCTCTTTGTCC 280851 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||| ||| |||| ||||| | |||| || |||| ||||| || Sbjct 280850 TGAATCTTTGTCTTAACGATATCGATAGTGTCAGAGCTTTCGACTTCCAGGGTGATGGTT 280791 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| ||||| ||||| || Sbjct 280790 TTTCCAGTGAGAGTCTTCACGAAAATCTG 280762 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | || || || || |||||||||| |||||| |||||||||||||| ||||| Sbjct 281198 AGGACCAAATGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGCCAAAGTCCTGCCATCC 281139 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| | | ||||||||| || ||| || || || Sbjct 281138 TCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTGGAATGCCCTCCTTATCT 281079 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| || | || || | |||| || || | ||||| || Sbjct 281078 TGAATCTTCGTCTTCACATTGTCAATTGTATCCGAGCTTTCAACTTCTAGGGTGATAGTT 281019 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| ||||| Sbjct 281018 TTCCCAGTAAGCGTCTTAACAAAGATTTG 280990 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| ||||| || || ||||| || | |||||| |||||||| || Sbjct 281435 CGAAGACGGAGAACAAGATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGCCAAGGTT 281376 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| ||||| || || |||||||| | ||| ||||| || || || Sbjct 281375 CGACCATCCTCCAATTGCTTCCCTGCAAAGATGAGCCTCTGTTGGTCTGGGGGGATACCC 281316 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| || | || || | || || || || | Sbjct 281315 TCCTTGTCCTGAATCTTGGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGG 281256 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || ||||| || || || Sbjct 281255 GTGATAGTCTTCCCAGTGAGGGTCTTCACGAAGATCTG 281218 >seq2306 Length=232912 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||||||||| |||||||| |||| |||||||||||| | || | ||||| Sbjct 177258 AGCACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTTCGGCCATCC 177317 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||| || | |||||||| || |||||| || || Sbjct 177318 TCGAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATTCCCTCCTTGTCT 177377 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| ||| || | |||||| | |||| || || | ||||| ||| Sbjct 177378 TGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCACTTCGAGGGTGATTGTC 177437 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| ||||| || || Sbjct 177438 TTTCCTGTTAGGGTTTTGACAAAGATCTG 177466 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||||||||| ||||||||||| | |||||||||||| | || | || || Sbjct 177486 AGCACAAGGTGGAGAGTTGACTCCTTTTGAATGTTGTAGTCAGCTAGGGTTCGGCCGTCC 177545 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| |||||||||||||| || | |||||||| || ||||||||| || Sbjct 177546 TCCAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATTCCTTCCTTGTCT 177605 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | |||||| | | || || || | ||||| ||| Sbjct 177606 TGGATCTTAGTCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCGAGAGTGATGGTC 177665 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || |||||||| ||||| Sbjct 177666 TTTCCAGTAAGGGTCTTCACAAAGATTTG 177694 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 |||||||| |||||||| |||| ||||||||| |||||||| | ||||| || |||||| Sbjct 176811 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCGAGCTGC 176870 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || ||||| || | | ||||||||| || ||| ||||| ||||||||||| Sbjct 176871 TTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGAATCTTC 176930 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | |||||| | | || || ||||| || || ||||| || || Sbjct 176931 GTCTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTAATGGTCTTCCCGGTA 176990 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || || || ||||| || Sbjct 176991 AGGGTCTTGACGAAAATCTG 177010 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || ||||||||||||| ||||| || || | ||||||||||||| Sbjct 176574 AGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCCGCAAGAGTCCTTCCATCT 176633 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| || || | | ||||||||| || || ||||| ||| Sbjct 176634 TCCAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCC 176693 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| || |||| |||||| | | || || |||| || || ||| Sbjct 176694 TGAATTTTCGCCTTGACATTGTCGATGGTGTCCGAACTCTCAACCTCCAGGGTAATGGTC 176753 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || || ||||| || Sbjct 176754 TTTCCGGTCAAGGTCTTGACGAAAATCTG 176782 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || |||||||| |||| |||||||||||| | || | |||||||| |||||| Sbjct 177039 TGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGCCCATCTTCGAGCTGC 177098 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 |||||||||||||| | | ||| ||||| || ||| || || || |||||||| Sbjct 177099 TTTCCGGCGAAGATCAACCTCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTA 177158 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | || || | | || || || | ||||| ||||| || ||| Sbjct 177159 GACTTGACATTGTCAATAGTATCGGAGCTCTCGACTTCGAGGGTGATGGTCTTCCCAGTG 177218 Query 199607 AGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| ||||| Sbjct 177219 AGAGTCTTGACAAAGATTTG 177238 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || |||||||| || | |||||| ||||| | || | ||||| Sbjct 176346 AGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCC 176405 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| | | ||||||||| || || || || ||| Sbjct 176406 TCGAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 176465 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || || | || || | | || || |||| ||||| ||| Sbjct 176466 TGAATCTTAGCCTTTACATTATCAATTGTATCCGAGCTCTCAACCTCCAGAGTGATGGTC 176525 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || ||||||||||| || Sbjct 176526 TTGCCAGTCAAGGTCTTCACAAAAATCTG 176554 >seq958 Length=433838 Score = 138 bits (152), Expect = 3e-27 Identities = 167/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| ||||| || ||||| || | ||||||||| || ||||| Sbjct 311909 CGAAGACGAAGAACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGCTAAAGTG 311968 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| ||||| |||||||||||||||||||| || ||||| || || ||| Sbjct 311969 CGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCT 312028 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| ||||| || || |||| ||| || | | ||| || || | Sbjct 312029 TCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCCGAGGATTCGACTTCTAGG 312088 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || |||||||| || |||||||| || || || |||||| Sbjct 312089 GTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTG---CATTTT 312132 Score = 91.5 bits (100), Expect = 3e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||||||||| ||| | |||||||| | ||||| ||||| |||||| | ||| Sbjct 312003 CTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGACTACAACATTCAG 311944 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || || ||||||||||||||| | | ||||| Sbjct 311943 AAGGAATCCACTCTTCACCTTGTTCTTCGTCTTCG 311909 >seq1925 Length=318408 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| ||||||||||| |||| ||||||||||| | || | ||||| Sbjct 244912 AGAACAAGGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGCGAGCGTTCGGCCATCC 244853 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||||||||| || ||||| |||||||||||||| || |||||| || || Sbjct 244852 TCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTATCT 244793 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| |||||| | | || || || | || || || Sbjct 244792 TGAATCTTCGTCTTAACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGAGTTATGGTT 244733 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || ||||| Sbjct 244732 TTTCCGGTAAGAGTCTTAACGAAGATTTG 244704 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| ||||||||||| |||| |||||| ||||| | ||| | |||||| Sbjct 245140 AGAACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCT 245081 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || |||||||| || ||||| | | ||||||||| || ||| ||||| || Sbjct 245080 TCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCT 245021 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || || || || | |||||| | | || || || | ||||| ||| Sbjct 245020 TGAATTTTGGTTTTGACATTGTCAATGGTGTCAGAATTCTCGACCTCAAGGGTGATAGTC 244961 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || |||||||| || Sbjct 244960 TTCCCAGTGAGGGTCTTAACAAAAATCTG 244932 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || || ||||| || | ||||||||| |||||||| | || || Sbjct 246052 AGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCGTCC 245993 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || || || || | | ||||||||| ||| ||||||||| ||| Sbjct 245992 TCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 245933 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||||| | || || ||||| ||||| || Sbjct 245932 TGTATCTTAGTCTTGACATTATCGATAGTGTCTGAGCTCTCGACCTCCAAGGTGATGGTT 245873 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || ||||| ||||| Sbjct 245872 TTCCCAGTCAAGGTCTTAACAAATATTTG 245844 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || ||||||||||| | ||||||||| || | ||||| ||||| Sbjct 245824 AGCACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCTGCAAGGGTCCTCCCATCC 245765 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| | | ||||| || || ||| || || ||| Sbjct 245764 TCGAGCTGCTTCCCTGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTATCC 245705 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| |||||||| | || || ||||| ||||| || Sbjct 245704 TGAATCTTAGCCTTGACATTGTCGATGGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTT 245645 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| || || |||||||| Sbjct 245644 TTCCCAGTCAAAGTCTTGACGAAAATTTG 245616 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || |||||||| || | |||||| ||||| | || | || || Sbjct 245596 AGCACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCGTCC 245537 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| || | ||| ||||| || ||| ||||| || Sbjct 245536 TCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 245477 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || || || || | |||||| | |||| || || | ||||| ||| Sbjct 245476 TGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTC 245417 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || |||||||| || Sbjct 245416 TTCCCAGTGAGGGTCTTAACAAAAATCTG 245388 >seq2770 Length=737149 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || || | || || | |||||||||||||| || | |||||| Sbjct 635882 AGGACAAGGTGGAGGGTGGATTTTTTCTGAATATTGTAGTCAGCCAAGGTGCGTCCATCC 635941 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||||||||| | | |||||||||||| |||| || ||| ||| Sbjct 635942 TCAAGTTGCTTCCCGGCGAAGATTAATCTCTGCTGGTCCGGGGAAATCCCCTCTTTGTCC 636001 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||||| ||||| || |||| | | || |||| ||||| ||| Sbjct 636002 TGGATTTTAGTTTTCACATTATCGACAGTATCTGAGCTCTAAACCTCCAGGGTGATGGTC 636061 Query 199598 TTACCCGTGAGAGTTTT 199614 || || || | ||| || Sbjct 636062 TTCCCAGTCAAAGTCTT 636078 Score = 93.3 bits (102), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| ||| ||||||||||| |||| ||||| ||||| | ||| | |||||| || | Sbjct 636298 CAAGATGGCCCGTCGACTCCTTCTGGATATTGTAATCAGCAAGAGTACGTCCATCCTCGA 636357 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || | ||||| | ||| || ||||| ||||| ||| |||||| Sbjct 636358 GCTGCTTCCCAGTAAAGATCAACTTCTGTTGATCCGGGGGGATTCCCTCTTTGCCCTGAA 636417 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT-GATCGTCTTA 199600 |||| ||| || ||||| ||||| | |||| || ||||| || || || || Sbjct 636418 TCTTGGTCTTAACATTGTCGACAGTGTCAGAGCTTTCAACCTCCAAGGTAAATTGTTTTC 636477 Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626 || || | ||| || ||||| ||||| Sbjct 636478 CCTGTCAAAGTCTTTACAAATATTTG 636503 Score = 91.5 bits (100), Expect = 3e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | || || || |||| |||||||| ||||| || || | ||||| ||||| Sbjct 636084 CAGCACCAAGTAAAGGGTAGACTACTTTTGGATATTGTAATCCGCAAGGGTCCTCCCATC 636143 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 || |||||||| || || || || | | ||||||||| | ||| ||||| || Sbjct 636144 ATCAAGCTGCTTCCCAGCAAATATCAACCTTTGCTGGTCCAGGGGAATACCTTCCTTATC 636203 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||||||| || || || | ||||||| | || || ||||| || || || Sbjct 636204 CTGAATCTTGGCTTTGACATTATCAATCGTGTCTGAGCTCTCAACCTCCAAAGTTATAGT 636263 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || | ||| || ||||||||||| Sbjct 636264 CTTCCCTGTCA-AGTCTTAACAAAAATTTG 636292 >seq2371 Length=888473 Score = 107 bits (118), Expect = 5e-18 Identities = 144/197 (73%), Gaps = 5/197 (3%) Strand=Plus/Minus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| |||||| || || | ||| | | ||||| ||||||||| |||||||| Sbjct 99675 CCTTTCTGGATGTTGTAATC-GCTAGAGTACGGTCGTCTTCAAGCTGCTTTTCGGCGAAG 99617 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 ||||||||| | || || || ||| |||||| || || || || ||| ||| Sbjct 99616 ATGAGACGCAGTTGATCGGGTTGAATGCCTTCTTTGTCATGGATTTTAGCCTTGACGTTG 99557 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 | | ||| || | ||||| || || | ||||| || |||||||| |||||||||||| Sbjct 99556 TTAATGGTATCACTAGTTTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACA 99497 Query 199619 AAAATTTGGTACATTTT 199635 || ||||| |||||| Sbjct 99496 AATATTTG---CATTTT 99483 >seq2448 Length=870776 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || || | || || || || ||||| || | |||||| || || | || Sbjct 350515 CGAAGTCGAAGCACCAAATGAAGCGTGGATTCCTTCTGAATGTTGTAATCTGCAAGTGTT 350456 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 ||||||||||||| || || || || ||||| | || || || || || || ||| Sbjct 350455 CTTCCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGGATGCCT 350396 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| || || |||| ||||| | || ||| ||||| || Sbjct 350395 TCTTTGTCTTGGATCTTGATTTTGACATTGTCGATTGTGTCGGATGATTCGACATCTAAG 350336 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || |||||||| ||||| || Sbjct 350335 GTTATGGTTTTACCAGTTAGGGTTTTCACGAAAATCTG 350298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178876088836871