Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2306 194 4e-44 seq958 176 1e-38 seq1925 170 4e-37 seq2360 163 6e-35 seq758 161 2e-34 seq1558 143 6e-29 seq2448 132 1e-25 seq2770 127 5e-24 seq2371 127 5e-24 seq2420 87.8 4e-12 >seq2306 Length=232912 Score = 194 bits (214), Expect = 4e-44 Identities = 169/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| ||||| || || || ||||| || || || |||| ||||| ||| Sbjct 177261 ACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTTCGGCCATCCTCG 177320 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || | ||| |||||||| ||||| || || ||||||||| Sbjct 177321 AGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGA 177380 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||||||| ||||||||||| || ||||||||||| ||||| | |||||| Sbjct 177381 ATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCACTTCGAGGGTGATTGTCTTT 177440 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| | ||||| || || | |||||| Sbjct 177441 CCTGTTAGGGTTTTGACAAAGATCTGCATT 177470 Score = 185 bits (204), Expect = 2e-41 Identities = 164/205 (80%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| ||||| ||||||||||| |||||||| || |||||||| ||||| Sbjct 176582 GTGAAGGGTTGACTCCTTTTGGATATTGTAATCCGCAAGAGTCCTTCCATCTTCCAGCTG 176641 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || | | || |||||||| || |||||||| ||||| |||||||| Sbjct 176642 CTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGAATTTT 176701 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| || || |||||||||||||| || || || ||||||| |||||||| || Sbjct 176702 CGCCTTGACATTGTCGATGGTGTCCGAACTCTCAACCTCCAGGGTAATGGTCTTTCCGGT 176761 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 ||| || || ||||| | |||||| Sbjct 176762 CAAGGTCTTGACGAAAATCTGCATT 176786 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| |||||||| || || || ||||| || ||||| || | |||||||||||||||| Sbjct 177039 TGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGCCCATCTTCGAGCTGC 177098 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | | ||||||||||| ||||| || || ||||||||||| || Sbjct 177099 TTTCCGGCGAAGATCAACCTCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTA 177158 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||| || ||||| || || || || || ||||| ||||| | ||||| || || Sbjct 177159 GACTTGACATTGTCAATAGTATCGGAGCTCTCGACTTCGAGGGTGATGGTCTTCCCAGTG 177218 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 | ||| || || || | ||||||| Sbjct 177219 AGAGTCTTGACAAAGATTTGCATT 177242 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| ||||| |||||||| ||||| || || || |||| || || || Sbjct 177489 ACAAGGTGGAGAGTTGACTCCTTTTGAATGTTGTAGTCAGCTAGGGTTCGGCCGTCCTCC 177548 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| || | ||| |||||||| ||||| ||||| |||||||| Sbjct 177549 AGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGG 177608 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || ||||||||||| ||||| || || || || || | |||||| Sbjct 177609 ATCTTAGTCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCGAGAGTGATGGTCTTT 177668 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | |||||| Sbjct 177669 CCAGTAAGGGTCTTCACAAAGATTTGCAT 177697 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || ||||| || ||||| |||||||| ||||| || | |||||| ||| Sbjct 176349 ACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCG 176408 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| | | || |||||||| || || || || ||||| ||| Sbjct 176409 AGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGA 176468 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||| || ||||| || || || || || || | ||||| Sbjct 176469 ATCTTAGCCTTTACATTATCAATTGTATCCGAGCTCTCAACCTCCAGAGTGATGGTCTTG 176528 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || ||||| || || || || | |||||| Sbjct 176529 CCAGTCAAGGTCTTCACAAAAATCTGCATT 176558 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||||||||| || || || ||||| ||||| | ||| | ||||| ||||||||| Sbjct 176811 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCGAGCTGC 176870 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| ||||| || | | || |||||||| ||||| ||||| ||||| ||||| || Sbjct 176871 TTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGAATCTTC 176930 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || ||||||||||| || || || || || | |||| ||||| || || Sbjct 176931 GTCTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTAATGGTCTTCCCGGTA 176990 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 176991 AGGGTCTTGACGAAAATCTGCAT 177013 >seq958 Length=433838 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||||||||| || || ||||| ||||| ||||| | ||| | |||||||| Sbjct 311920 AACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGCTAAAGTGCGGCCATCTTC 311979 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||| || || |||||||| || |||||||||||||| || |||||||||||||| || Sbjct 311980 GAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTCCTG 312039 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||| || || ||||| ||||| ||| ||||| ||||| | || || Sbjct 312040 GATCTTGGCTTTGACATTGTCGATGGTATCCGAGGATTCGACTTCTAGGGTTATGGTTTT 312099 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || | ||||| ||||| | ||||||| Sbjct 312100 ACCCGTTAGGGTTTTCACGAAGATCTGCATTT 312131 >seq1925 Length=318408 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || ||||| || ||||| |||||||| ||||| || | ||| || || Sbjct 245593 ACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCGTCCTCA 245534 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| |||| ||||||||||| ||||||||||| ||||||||| Sbjct 245533 AGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGA 245474 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||| || ||||||||||| || ||||| || |||||||| | ||||| Sbjct 245473 ATTTTGGTTTTGACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTC 245414 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 245413 CCAGTGAGGGTCTTAACAAAAATCTGCAT 245385 Score = 163 bits (180), Expect = 6e-35 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| |||||||| ||||| || ||||| || |||||||| |||||||| Sbjct 245816 GTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCTGCAAGGGTCCTCCCATCCTCGAGCTG 245757 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| ||||| ||||| | || ||| || ||||| |||||||| || || || ||||| || Sbjct 245756 CTTCCCTGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTT 245697 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| || || |||||||| || || || || || | || | || || || || Sbjct 245696 AGCCTTGACATTGTCGATGGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTTTTCCCAGT 245637 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 |||||| || ||||| | ||||||| Sbjct 245636 CAAAGTCTTGACGAAAATTTGCATT 245612 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||||||||| || || ||||| || || || |||||||| |||||||| | |||||||| Sbjct 245138 AACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCTTC 245079 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || || ||||| | | || |||||||| ||||| ||||| |||||||| Sbjct 245078 AAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTG 245019 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| ||||| || ||||||||||| ||| | || || |||||||| | ||||| Sbjct 245018 AATTTTGGTTTTGACATTGTCAATGGTGTCAGAATTCTCGACCTCAAGGGTGATAGTCTT 244959 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 244958 CCCAGTGAGGGTCTTAACAAAAATCTGCAT 244929 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| ||||| || || ||||| ||||| || || | ||| | ||| || || Sbjct 246049 ACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCGTCCTCC 245990 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | ||||||||| || || || | | || ||||| |||||||| ||||| ||||| || Sbjct 245989 AACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGT 245930 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || || ||||| || || || || || | ||| | || || Sbjct 245929 ATCTTAGTCTTGACATTATCGATAGTGTCTGAGCTCTCGACCTCCAAGGTGATGGTTTTC 245870 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || ||||| || || || || | ||||||| Sbjct 245869 CCAGTCAAGGTCTTAACAAATATTTGCATT 245840 >seq2360 Length=898569 Score = 163 bits (180), Expect = 6e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| ||||| || ||||| || || || |||||||| | ||||| || |||||| Sbjct 280733 TGCAGAGTAGACTCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCAAGCTGC 280674 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || |||||||| ||||| | || |||||||| || || || ||||| || || || ||| Sbjct 280673 TTCCCTGCGAAAATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTATCCTGTATCTTT 280614 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || |||||||||||||| ||| |||| ||||| | ||||| |||||| |||||| Sbjct 280613 GTCTTCACATTCTCAATGGTGTCGGAAGTTTCAACTTCCAAGGTAATCGTCTTGCCTGTC 280554 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| || || || | ||||| Sbjct 280553 AGAGTCTTGACAAAGATCTGCAT 280531 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| ||||| || ||||| ||||| |||||||| ||||| || | ||| Sbjct 280506 GTGGAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCTGCCATCATCCAACTG 280447 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| || | || ||||| || || || || || || ||||||||||| Sbjct 280446 CTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGTATACCCTCCTTATCTTGAATTTT 280387 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| |||||||| ||||| || | || || || ||||| | ||||| || || Sbjct 280386 GGTCTTGACATTCTCAATAGTGTCAGATGTCTCGACCTCGAGGGTGATGGTCTTGCCAGT 280327 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || | |||||| Sbjct 280326 CAGGGTTTTCACAAAGATTTGCAT 280303 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| | || || || || || ||||||||||| || | || | ||||| || Sbjct 280967 ACTAGGTGCAATGTAGATTCCTTCTGGATATTGTAATCAGCCAATGTCCGGCCATCATCC 280908 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| ||||| ||||| || | || |||||||| || || || |||||||| ||| Sbjct 280907 AACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATTCCCTCTTTGTCCTGA 280848 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||| ||| | || || ||||| || ||||| ||||| ||||| | || ||| Sbjct 280847 ATCTTTGTCTTAACGATATCGATAGTGTCAGAGCTTTCGACTTCCAGGGTGATGGTTTTT 280788 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 280787 CCAGTGAGAGTCTTCACGAAAATCTGCAT 280759 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || || || || || || ||||| |||||||| || | |||| ||||| || Sbjct 281424 AACAAGATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGCCAAGGTTCGACCATCCTC 281365 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | ||||| ||||| ||||| || | ||||||||||| || || || || ||||| || Sbjct 281364 CAATTGCTTCCCTGCAAAGATGAGCCTCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTG 281305 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| || |||||||| || || ||| | || || || ||||| | ||||| Sbjct 281304 AATCTTGGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTCTT 281245 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 281244 CCCAGTGAGGGTCTTCACGAAGATCTGCAT 281215 >seq758 Length=475707 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||||||||||||||| || || || || || ||||| ||||| | ||| | || ||||| Sbjct 367594 AACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCGTCTTC 367653 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || || |||||||||||||| || || |||||||||||||| Sbjct 367654 GAGCTGCTTTCCGGCGAAAATGAGGCGTTGTTGGTCTGGTGGGATTCCTTCTTTGTCTTG 367713 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || ||| ||||| || || || |||||||| ||| || || ||||| | || || Sbjct 367714 GATCTTTGCTTTGACATTGTCGATTGTGTCCGAGGATTCTACCTCTAGGGTTATGGTTTT 367773 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || | ||||| ||||| | ||||||| Sbjct 367774 ACCCGTTAGGGTTTTCACGAAGATCTGCATTT 367805 >seq1558 Length=1070493 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| ||||| ||||| | || ||||| Sbjct 239360 ACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCA 239301 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || |||||||| || || || ||||||||||| |||||||| |||||||| Sbjct 239300 AGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGG 239241 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || |||||||| || ||| || || ||||| | || || Sbjct 239240 ATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCAACCTCTAGGGTTATTGTTTTC 239181 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | ||||| Sbjct 239180 CCAGTTAGGGTTTTCACGAATATCTGCAT 239152 >seq2448 Length=870776 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| ||||| || || ||||| |||||||| ||||| ||||| |||||||| | || Sbjct 350497 TGAAGCGTGGATTCCTTCTGAATGTTGTAATCTGCAAGTGTTCTTCCATCTTCCAATTGT 350438 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| | |||||||| ||||| || ||||||||||||||||| || || Sbjct 350437 TTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGGATCTTG 350378 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||| || || || ||||| || ||| || || | ||| | || || || || Sbjct 350377 ATTTTGACATTGTCGATTGTGTCGGATGATTCGACATCTAAGGTTATGGTTTTACCAGTT 350318 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | ||||| Sbjct 350317 AGGGTTTTCACGAAAATCTGCAT 350295 >seq2770 Length=737149 Score = 127 bits (140), Expect = 5e-24 Identities = 152/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 || ||| || |||| ||||| ||||||||||| ||||| || |||||||| || ||||| Sbjct 636093 GTAAAGGGTAGACTACTTTTGGATATTGTAATCCGCAAGGGTCCTCCCATCATCAAGCTG 636152 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || | | ||| ||||| | ||||| ||||| || || ||||| || Sbjct 636153 CTTCCCAGCAAATATCAACCTTTGCTGGTCCAGGGGAATACCTTCCTTATCCTGAATCTT 636212 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || ||||| ||||| || || || || || | || | ||||| ||||| Sbjct 636213 GGCTTTGACATTATCAATCGTGTCTGAGCTCTCAACCTCCAAAGTTATAGTCTTCCCTGT 636272 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | |||| || || || | ||||||| Sbjct 636273 C-AAGTCTTAACAAAAATTTGCATT 636296 Score = 122 bits (134), Expect = 2e-22 Identities = 147/199 (74%), Gaps = 1/199 (1%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || ||||||||||| |||||||| | ||||| ||||||||||| || Sbjct 636309 GTCGACTCCTTCTGGATATTGTAATCAGCAAGAGTACGTCCATCCTCGAGCTGCTTCCCA 636368 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 | ||||| | ||||| || || || || || |||||| | ||||| || ||| Sbjct 636369 GTAAAGATCAACTTCTGTTGATCCGGGGGGATTCCCTCTTTGCCCTGAATCTTGGTCTTA 636428 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCA-CTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || || | ||||| || ||||| | || ||||| || || || ||||||||||| Sbjct 636429 ACATTGTCGACAGTGTCAGAGCTTTCAACCTCCAAGGTAAATTGTTTTCCCTGTCAAAGT 636488 Query 195123 TTTTACGAACACTTGCATT 195141 ||||| || | ||||||| Sbjct 636489 CTTTACAAATATTTGCATT 636507 Score = 111 bits (122), Expect = 3e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 194947 GACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCG 195006 ||||| || || || | ||||| ||||| |||| |||| || ||||| || || ||| Sbjct 636530 GACTCCTTCTGGATGCTATAATCCGCAAGGGTTCGGCCATTCTCAAGCTGTTTTCCAGCG 636589 Query 195007 AAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066 ||||| || || || || ||||| ||||| || ||||| ||||||||||| ||| || Sbjct 636590 AAGATCAGACGCTGCTGATCTGGGGGAATCCCCTCTTTATCTTGAATTTTGGTCTTAACA 636649 Query 195067 TTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTT 195126 || ||||| || || ||||| || || || || || | | || || || | ||||| Sbjct 636650 TTATCAATTGTATCAGAACTCTCGACCTCGAGAGTCATGGATTTGCCAGTTAGGGTTTTG 636709 Query 195127 ACGAACACTTGCAT 195140 || || | |||||| Sbjct 636710 ACAAAAATTTGCAT 636723 Score = 107 bits (118), Expect = 4e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| | ||| ||||||||||| || || | || | ||||| || Sbjct 635885 ACAAGGTGGAGGGTGGATTTTTTCTGAATATTGTAGTCAGCCAAGGTGCGTCCATCCTCA 635944 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| | || || ||||| || | ||| || |||||||| || Sbjct 635945 AGTTGCTTCCCGGCGAAGATTAATCTCTGCTGGTCCGGGGAAATCCCCTCTTTGTCCTGG 636004 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || || || || | || || || || | || || ||||| | ||||| Sbjct 636005 ATTTTAGTTTTCACATTATCGACAGTATCTGAGCTCTAAACCTCCAGGGTGATGGTCTTC 636064 Query 195112 CCTGTCAAAGTTTT 195125 || |||||||| || Sbjct 636065 CCAGTCAAAGTCTT 636078 >seq2371 Length=888473 Score = 127 bits (140), Expect = 5e-24 Identities = 146/195 (75%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || || ||||||||| | ||||| | | ||||| |||||||| | ||||||| Sbjct 99674 CTTTCTGGATGTTGTAATCG-CTAGAGTACGGTCGTCTTCAAGCTGCTTTTCGGCGAAGA 99616 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | || || |||| || || |||||||||||||||| || ||||| ||||||||| | Sbjct 99615 TGAGACGCAGTTGATCGGGTTGAATGCCTTCTTTGTCATGGATTTTAGCCTTGACGTTGT 99556 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||||| || | |||| || |||||||| | || || || || | |||||| || | Sbjct 99555 TAATGGTATCACTAGTTTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACAA 99496 Query 195131 ACACTTGCATTTATG 195145 | | |||||||| || Sbjct 99495 ATATTTGCATTTTTG 99481 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || || ||||| || |||||||| | |||||||| ||||||||||| ||||||| Sbjct 63080 CTTTCTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGA 63021 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | | ||||| ||||||||||| || ||| Sbjct 63020 TCAAACGTTGCTGGTCTGGAGGGATTCCT 62992 >seq2420 Length=184474 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 125524 CTTCCAAAGAAACACGGCAGGGGAGGACAATCTGCTTTGCGTTTTGAGAGACTTCGAAAA 125583 || ||||||||||||||||| |||||||||||||| || ||||||| | ||||||| Sbjct 123055 CTCCCAAAGAAACACGGCAGAGGAGGACAATCTGCATTACGTTTTGCTCGTCTTCGAATG 123114 Query 125584 GAAAAGAGACACAACTATTTGAGGAA 125609 || ||| | || |||||| ||||||| Sbjct 123115 GAGAAGCGGCATAACTATGTGAGGAA 123140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109438769502971