Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2360 140 3e-28 seq1925 140 3e-28 seq2448 134 1e-26 seq2306 129 5e-25 seq2770 109 4e-19 seq1558 105 5e-18 seq958 105 5e-18 seq2371 96.9 3e-15 >seq2360 Length=898569 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || || | |||| || | |||||||| || || ||||||||||| || Sbjct 280985 CCTCCTCTCAACCGGAGCACTAGGTGCAATGTAGATTCCTTCTGGATATTGTAATCAGCC 280926 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| ||||| ||||| |||||||| |||| | ||| || || || || Sbjct 280925 AATGTCCGGCCATCATCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTGGTGGG 280866 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || ||||| || ||||| ||| || || || || | ||||||||| |||| ||| Sbjct 280865 ATTCCCTCTTTGTCCTGAATCTTTGTCTTAACGATATCGATAGTGTCAGAGCTTTCGACT 280806 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| ||||| || || | ||| || || || |||||||| Sbjct 280805 TCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 280759 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | ||||| || || || || || ||||| || ||||| ||||| Sbjct 280529 CCACCCCTCAGACGGAGGACTAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCT 280470 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||||| |||| ||||| |||||||| || || || | | ||| || || || || Sbjct 280469 AGAGTTCTGCCATCATCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGT 280410 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || |||||||||||||| || ||| | || | ||||||||| || || || Sbjct 280409 ATACCCTCCTTATCTTGAATTTTGGTCTTGACATTCTCAATAGTGTCAGATGTCTCGACC 280350 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || ||||| || | ||||| ||||| || ||||| Sbjct 280349 TCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 280303 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | || ||||| ||||| ||||| ||||| || |||||||| || Sbjct 281213 CCACCTCTGAGGCGGAGGACCAAATGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGCC 281154 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| ||| |||| |||| ||||| || ||||| || | | ||| || || || ||| Sbjct 281153 AAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTGGA 281094 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || ||||||||||| || || ||| | || | || || || |||| ||| Sbjct 281093 ATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCCGAGCTTTCAACT 281034 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || |||| ||||| || || | || || ||||| || |||||| Sbjct 281033 TCTAGGGTGATAGTTTTCCCAGTAAGCGTCTTAACAAAGATTTGCATG 280986 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | ||| ||||||||||| || || || |||||||| || | |||| | Sbjct 281430 ACGGAGAACAAGATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGCCAAGGTTCGACC 281371 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||||||||| |||||||| || | | |||||| || || || || || || || Sbjct 281370 ATCCTCCAATTGCTTCCCTGCAAAGATGAGCCTCTGTTGGTCTGGGGGGATACCCTCCTT 281311 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||| || || ||| | || | || ||||| || || || || || |||| Sbjct 281310 GTCCTGAATCTTGGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGAT 281251 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | || || || || |||||||| Sbjct 281250 AGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCAT 281215 >seq1925 Length=318408 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||| | ||| | || ||||| || || || || || |||||||| || Sbjct 245155 CCACCTCTTAAACGAAGAACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 245096 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | |||||| || ||||| ||||| | ||| || || || ||| Sbjct 245095 AGAGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGA 245036 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||||||||| ||| ||| | || | |||||||| | || || Sbjct 245035 ATACCTTCCTTGTCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCAGAATTCTCGACC 244976 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| || || || || | || || ||||| |||||||| Sbjct 244975 TCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAAATCTGCAT 244929 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | ||| | ||| | || ||||| || || || || |||||||| || ||| Sbjct 244927 CCTCCTCTAAGACGGAGAACAAGGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGCG 244868 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||| | |||| |||| ||||| || ||||| |||| |||||| || || || ||| Sbjct 244867 AGCGTTCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGA 244808 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || ||||||||||| || || ||| | || | |||||||| | || || Sbjct 244807 ATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTGTCGATGGTGTCAGAACTCTCAACC 244748 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | ||||| ||||| | ||| || || || || ||||| Sbjct 244747 TCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACGAAGATTTGCAT 244701 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||||||||| | || || ||||| ||||| || ||||| || ||||| || | Sbjct 245841 TTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCTG 245782 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | || || |||| || | ||||| |||||||| ||||| | || ||||| || | Sbjct 245781 CAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATCAATCTTTGCTGATCTGGGG 245722 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 ||||||| || ||||| ||||| || || ||| | || | ||||| || | || | Sbjct 245721 GAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTGTCGATGGTGTCTGAGCTCTCAA 245662 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | ||||| ||||| || || ||||| || || || || ||||| Sbjct 245661 CCTCCAAAGTGATAGTTTTCCCAGTCAAAGTCTTGACGAAAATTTGCAT 245613 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||||||||| | || | ||| ||||| || || || || || |||||||| | Sbjct 245613 TTCCACCTCTTAAACGGAGCACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAG 245554 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | || | | || || | ||||| || ||||| |||| | |||||| || || | Sbjct 245553 CAAGGGTACGCCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCTGGGG 245494 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| || ||||||||||| ||| ||| | || | ||||| || |||| | Sbjct 245493 GAATGCCTTCCTTGTCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAGCTTTCAA 245434 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | ||||| |||| || || || || | || || ||||| ||||||||| Sbjct 245433 CCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTAACAAAAATCTGCATG 245384 >seq2448 Length=870776 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||| || ||||| || || || |||||||| || | ||||| |||| ||| Sbjct 350503 ACCAAATGAAGCGTGGATTCCTTCTGAATGTTGTAATCTGCAAGTGTTCTTCCATCTTCC 350444 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 ||||| || || ||||| || || || |||||||| || || ||||||||||| ||||| Sbjct 350443 AATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGG 350384 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||| ||| | || | ||||| || | ||| || || | || | ||||| Sbjct 350383 ATCTTGATTTTGACATTGTCGATTGTGTCGGATGATTCGACATCTAAGGTTATGGTTTTA 350324 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || |||| ||||| || || |||||||| Sbjct 350323 CCAGTTAGGGTTTTCACGAAAATCTGCAT 350295 >seq2306 Length=232912 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| || || || | || || |||||||| || || ||||| ||||||||||| | Sbjct 176557 TTCCTCCCCTCAATCGGAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCCG 176616 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||| || |||| |||| ||||| || ||||| ||||| | ||| || || || | Sbjct 176617 CAAGAGTCCTTCCATCTTCCAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGG 176676 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | |||||||| || || |||||||| || ||| | || | ||||| || | || | Sbjct 176677 GGATGCCTTCCTTGTCCTGAATTTTCGCCTTGACATTGTCGATGGTGTCCGAACTCTCAA 176736 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || || | || || ||||| || || || || || |||||||| Sbjct 176737 CCTCCAGGGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 176785 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| || | ||| | || | || || || || || || || || ||||| || | Sbjct 177241 TTCCTCCCCTAAGACGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAG 177300 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 ||| |||| | |||| || | ||||| || || || |||| | || || || || | Sbjct 177301 CGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGG 177360 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || || || ||||||||||| || || | || | ||||| || |||||| Sbjct 177361 GAATTCCCTCCTTGTCTTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCA 177420 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| || |||| || || || |||| ||||| ||||| |||||||| Sbjct 177421 CTTCGAGGGTGATTGTCTTTCCTGTTAGGGTTTTGACAAAGATCTGCAT 177469 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || || |||||||| || | || | |||| || | ||| Sbjct 176355 TGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCGAGCTGC 176414 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| ||||| | ||| || || || || || || || || || ||||| || Sbjct 176415 TTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGAATCTTA 176474 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 |||||| | || | || || || | || || || ||||||| || ||||| || Sbjct 176475 GCCTTTACATTATCAATTGTATCCGAGCTCTCAACCTCCAGAGTGATGGTCTTGCCAGTC 176534 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| |||||||| Sbjct 176535 AAGGTCTTCACAAAAATCTGCAT 176557 >seq2770 Length=737149 Score = 109 bits (120), Expect = 4e-19 Identities = 158/222 (71%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 101248 TCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGT 101307 ||||||||| | || || | ||||||||| | ||||| ||||||||||| || | || Sbjct 636075 TCTTAAACGCAGCACCAAGTAAAGGGTAGACTACTTTTGGATATTGTAATCCGCAAGGGT 636134 Query 101308 TCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCC 101367 || |||| || | ||||| || ||||||||||| | || || || | ||||| || Sbjct 636135 CCTCCCATCATCAAGCTGCTTCCCAGCAAATATCAACCTTTGCTGGTCCAGGGGAATACC 636194 Query 101368 TTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAG 101427 ||| ||||| ||||| || ||| ||| | || | ||||| || | || || || | Sbjct 636195 TTCCTTATCCTGAATCTTGGCTTTGACATTATCAATCGTGTCTGAGCTCTCAACCTCCAA 636254 Query 101428 AGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| | || || || | | |||| || ||||| || ||||| Sbjct 636255 AGTTATAGTCTTCCCTG-TCAAGTCTTAACAAAAATTTGCAT 636295 Score = 102 bits (112), Expect = 6e-17 Identities = 142/198 (72%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 || || || || || ||||||||||| || | ||| | |||| || | ||||| || Sbjct 636309 GTCGACTCCTTCTGGATATTGTAATCAGCAAGAGTACGTCCATCCTCGAGCTGCTTCCCA 636368 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 | ||| ||||| ||||||||| || || || || ||||| | ||||| || || Sbjct 636369 GTAAAGATCAACTTCTGTTGATCCGGGGGGATTCCCTCTTTGCCCTGAATCTTGGTCTTA 636428 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCA-CTTCAAGAGTGACCGTTTTGCCGGTTAAAGT 101451 ||| | || ||||||||||| |||| | || |||| | ||||| || || ||||| Sbjct 636429 ACATTGTCGACAGTGTCAGAGCTTTCAACCTCCAAGGTAAATTGTTTTCCCTGTCAAAGT 636488 Query 101452 TTTTACAAATATCTGCAT 101469 ||||||||||| ||||| Sbjct 636489 CTTTACAAATATTTGCAT 636506 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 101275 AGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGC 101334 ||| || || || || | ||||| || | |||| | ||| || | || || || || Sbjct 636529 AGACTCCTTCTGGATGCTATAATCCGCAAGGGTTCGGCCATTCTCAAGCTGTTTTCCAGC 636588 Query 101335 AAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTAC 101394 || |||| |||||| ||||| || ||||| || ||||||||||||||||| || || Sbjct 636589 GAAGATCAGACGCTGCTGATCTGGGGGAATCCCCTCTTTATCTTGAATTTTGGTCTTAAC 636648 Query 101395 AATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTT 101454 | | || | || ||||| | || || || ||||| | | |||||| |||| ||||| Sbjct 636649 ATTATCAATTGTATCAGAACTCTCGACCTCGAGAGTCATGGATTTGCCAGTTAGGGTTTT 636708 Query 101455 TACAAATATCTGCAT 101469 ||||| || ||||| Sbjct 636709 GACAAAAATTTGCAT 636723 >seq1558 Length=1070493 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || ||||| ||||||| ||| | | | || || | || Sbjct 239354 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCAAGCTGT 239295 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | |||||| || || || || |||||||| || ||||| || || Sbjct 239294 TTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTA 239235 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | ||| || || || || | ||||| || ||| Sbjct 239234 GTCTTCACATTGTCGATGGTGTCTGAGGATTCAACCTCTAGGGTTATTGTTTTCCCAGTT 239175 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||||| || ||||||||||| Sbjct 239174 AGGGTTTTCACGAATATCTGCAT 239152 >seq958 Length=433838 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | ||||| || ||||| || || || ||||| ||||| | ||| | | | Sbjct 311914 ACGAAGAACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGCTAAAGTGCGGCC 311973 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | || || || || || || | ||| ||||| || || || ||||||||||| Sbjct 311974 ATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTT 312033 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || || || ||| ||| | || | || || || | ||| ||||| || || | Sbjct 312034 GTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCCGAGGATTCGACTTCTAGGGTTAT 312093 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || |||| ||||| || || |||||||| Sbjct 312094 GGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 312129 >seq2371 Length=888473 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/190 (72%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| || || ||||||||| | | ||| | | | || || | ||||| | || || | Sbjct 99674 CTTTCTGGATGTTGTAATCG-CTAGAGTACGGTCGTCTTCAAGCTGCTTTTCGGCGAAGA 99616 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 | | |||| |||||||||| ||||||||||||| || || ||||| || || | | Sbjct 99615 TGAGACGCAGTTGATCGGGTTGAATGCCTTCTTTGTCATGGATTTTAGCCTTGACGTTGT 99556 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | || ||| ||||| || ||||| |||| ||||| || || | |||||| |||| Sbjct 99555 TAATGGTATCACTAGTTTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACAA 99496 Query 101460 ATATCTGCAT 101469 |||| ||||| Sbjct 99495 ATATTTGCAT 99486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396263848285641