Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1325 466 2e-126 seq1658 383 2e-101 seq2002 300 2e-76 seq603 104 3e-17 >seq1325 Length=385796 Score = 466 bits (516), Expect = 2e-126 Identities = 702/989 (71%), Gaps = 13/989 (1%) Strand=Plus/Minus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||| | |||||||| || ||||| | ||||||||||||||||||||| ||||| Sbjct 7966 GCTAGGTCTTGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAAGTTA 7907 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || ||| | | |||| |||| || | | | || | | |||||| || ||| Sbjct 7906 GCATGGTTAATGATATCAGCCCAAGTATGAATTACACGACCTTGACTATCAACTACAGAT 7847 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || ||||||||||| |||||||| ||||| || | ||||| | || || ||| Sbjct 7846 TGGTTGAAATTGAAACCATTTAAGTTGAAGGCCATAGTACTAATACCTAAAGCAGTAAAC 7787 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAG-TGAAGACTTCTTGAGTTGTTGAA 124287 || | || ||| ||||| || | |||| ||||||| | |||| | ||||||||||| Sbjct 7786 CAAATACCTACTACAGGCCAAGCAGCTAAGAAGAAGGTAAAGAA--CGAGAGTTGTTGAA 7729 Query 124288 TGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGT 124347 |||||| || ||||| | || || || ||||| || || ||||| || || || || Sbjct 7728 ACTAGCATATTGAAAGATCAATCGGCCGAAATAACCATGAGCAGCTACAATATTATAAGT 7669 Query 124348 TTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCT 124407 |||||| ||||| | ||| | ||||| | || || || | | ||| ||||| || Sbjct 7668 TTCTTCCTCTTGCCTGAATCTGTAACCCTCATTAGCAGATTCATTTTATGTGGTTTCCCT 7609 Query 124408 GATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGAT--CCTCCGAAC 124465 ||| | | ||| || || | ||||||||||| || | ||||||| ||| ||||| Sbjct 7608 GATCAAACTAGAAGTTACCAAGGAACCATGCATAGC--ACTATAAAGAGAGCCTTCGAAC 7551 Query 124466 ATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAA 124525 | || ||||| ||| |||| | || |||||||| || ||||| ||||| || ||||| Sbjct 7550 ACACCAGCTACACCTAACATGCGAAATGGATGCATAAGGATGTTGTGCTCAGCCTGGAAT 7491 Query 124526 ACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCC 124585 || | ||||||||||||||||| ||||| || || |||||||||||||| || || Sbjct 7490 ACAATCATAAAGTTGAAAGTACTAGAGATTCCTAGAGGCATACCATCAGAAAAGCTTCCT 7431 Query 124586 TGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCA 124645 ||||||| | |||| | ||||| ||| | || || | || || |||||||| ||| Sbjct 7430 TGACCAATTAGGTAGATCAAGAAAACAACAGTAGCCGCTGCAACCGGAGCTGAATATGCA 7371 Query 124646 ACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTAT 124705 ||| |||||||| ||||| || | | | | |||||||||| | ||||| || Sbjct 7370 ACATCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAA 7311 Query 124706 GCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAAC 124765 || | ||||| | |||| | || | | | ||||||||| || || || ||| Sbjct 7310 CATGCTACACCAAGTAAAAAGTTTAGAACAATTAGTTCATAAGGACCTCCGTTGTATAAC 7251 Query 124766 CATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGAT 124825 || |||||||| | ||||||||||| ||||| || ||||| | || ||||| || Sbjct 7250 CACTCATCAACCGACGCTGCTTCCCATATTGGATAAAAGTGCAACCCTATAGCTGCAGAA 7191 Query 124826 GATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGT 124885 | |||| || ||||| || || || ||||| || || | | ||| || | || || Sbjct 7190 GTAGGAATAATGGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGACCCGGAAACAAGT 7131 Query 124886 TCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGC 124944 || | || || || ||||| || |||| || ||||| || || | || || ||| | Sbjct 7130 TCACGAATACCATCAATATCTACTAGAGGAGCAGCAATGAAGGCTAAAATAAATACA-GA 7072 Query 124945 TGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTT 125004 | ||| || | |||| ||| ||||| | |||||||||||| |||| ||||| ||||| Sbjct 7071 AGTTGCAGTCAATAAGGTTGGGATCATCAAAACACCAAACCATCCAATATAAAGACTGTT 7012 Query 125005 GTT--TGTTGATGTTACCCACTCACAGAA 125031 || ||||| |||| | | | |||||| Sbjct 7011 TTTAGTGTTG--GTTATCAAGTTACAGAA 6985 >seq1658 Length=355568 Score = 383 bits (424), Expect = 2e-101 Identities = 663/959 (69%), Gaps = 12/959 (1%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||||| |||||||| || ||||| | ||||||||||||||||||||| | ||| Sbjct 186934 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 186993 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | | |||| |||| || | | || | | |||||| || ||| Sbjct 186994 GCACGGTTAATGATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTACAGAT 187053 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || ||||||||||| |||||||| ||||| || | ||||| | || | ||| Sbjct 187054 TGGTTGAAATTGAAACCATTTAAGTTGAAGGCCATAGTACTAATACCTAAAGCAATAAAC 187113 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | || ||| ||||| || | |||| ||||||||| | | | |||| |||||| Sbjct 187114 CAAATACCTACTACAGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAGTAGTTGAAA 187173 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 || ||| || ||||| | || | || ||||| || || ||||| || || || ||| Sbjct 187174 CTAGTATATTGAAAGATCAATCGGGCGAAATAACCATGAGCAGCTACAATATTATAAGTT 187233 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||| ||||| ||||| | ||||| | || || || | ||||| ||||| || Sbjct 187234 TCTTCCTCTTGCCCGAATCTGTAACCCTCATTAGCAGATTCATTTTCTGTGGTTTCCCTA 187293 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTG-AGAATAAAGATCCTCCGAACAT 124467 || | | ||| | || | ||||||||||| || |||| | ||| | ||||| | Sbjct 187294 ATCAAACTAGAAATTACCAAGGAACCATGCATAGCACTAGAA-AGAGAGCGGCCGAATAC 187352 Query 124468 TCCTG--------CTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCT 124519 || | |||| ||| |||||| || |||||||| || ||||| ||||| || Sbjct 187353 ACCAGGTCACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCAGCC 187412 Query 124520 TGGAAAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAAT 124579 | ||| || | |||||||||||||||||| ||||| | || |||||||||||| | ||| Sbjct 187413 TAGAATACAATCATAAAGTTGAAAGTACCAGAGATTTCTAGAGGCATACCATCATAAAAT 187472 Query 124580 GAACCCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAA 124639 || ||||||| |||||| | ||||| ||||| || || | | | ||| || Sbjct 187473 CTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCCGCTGCAATCAGAGCTAAA 187532 Query 124640 TAAGCAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCC 124699 || |||||| |||||||| ||||| |||| | | | |||||||||| | ||| Sbjct 187533 TATGCAACAACAATCCAAGGGCGCATACCTAGACGGAAACTAAGTTCCCACTCACGACCC 187592 Query 124700 ATGTATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTA 124759 || || || | ||||| | ||||| | || | | | |||||||||||| || Sbjct 187593 ATATAACATGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTG 187652 Query 124760 TACAACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCG 124819 || ||||| |||||||| || ||||| || ||||| || ||||| | || | | | Sbjct 187653 TATAACCACTCATCAACCAACGCCGCTTCTCATATTGGATAAAAGTGCAACCCTACAACT 187712 Query 124820 TTTGATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCT 124879 | | |||| || | ||| || || || || || || || | | ||| || | Sbjct 187713 GCAAAAGTAGGAATAATGGTACCCGAAATAATATTCTTTCCGTAAAGTAGAGACCCGGAA 187772 Query 124880 ACTGGTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA- 124938 || ||||| | || || || ||||| | |||| || ||||| || || | || || Sbjct 187773 ACAGGTTCACGAATACCATCAATATCTAATAGAGGAGCAGCAATGAAGGCTATAATAAAT 187832 Query 124939 ACATGCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAA 124997 ||| | | ||| || | |||| || ||||| | |||||||||||| |||| ||||| Sbjct 187833 ACA-GAAGTTGCAGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATATAAA 187890 >seq2002 Length=1023113 Score = 300 bits (332), Expect = 2e-76 Identities = 690/1038 (66%), Gaps = 22/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 168443 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 168384 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | || ||||| || | ||||| || || || ||||| Sbjct 168383 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGAA 168324 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 ||| || || || || ||||| ||||| | || || || || | ||||| || || | Sbjct 168323 AGTTTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAATGAAGTCATAGGCACG 168264 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| | || | ||| || | || | || |||| | ||| | || || || Sbjct 168263 TAGGTTCAAAGCCATACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 168204 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 168203 AAATAACATAAAGAAATGTAACCAACATTTATTGGAAAAAGCAACGCCAAAAATTTGGGA 168144 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 168143 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGGGTTGGGTTAAAAGC 168084 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| || ||| ||||||| | || | Sbjct 168083 CCGGAA---TGTAT-TTGCC-----CCATCACC------------GTCTTCAAATAAATT 168045 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || || |||||||| || ||||||| || | || | || || ||||| Sbjct 168044 ATTTTCTACGGTAGCGCCATGAATAGCGCATAGTAGAGCGGCGCCCAATACACCGGCAAC 167985 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| ||||||||||||| ||| || || || ||||| | || | || | Sbjct 167984 TCCCATCATATGAAATGGATTCAGTGTCCAATTATGAAACCCTTGAAAAAAGAGAATGAA 167925 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || ||||| | ||| || ||||| |||||||||| |||||||||||| Sbjct 167924 TCGAAATATAGCTGCTATACCAAAACTAGGTGCAAAGAACCAACCAGACTGACCTAGTGG 167865 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || || || | | || || || || | |||| ||||||| ||| || || Sbjct 167864 ATAAATTAGGAATACAGAAACAAAAACAGCAATTGGACCAGATAATGCGATTGCATTATA 167805 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||| | | || || || | ||| ||||| | | ||| |||||||| ||| | Sbjct 167804 AGGGCGCAATTGAACGGATCGAGCAAGCTCGAATTGACGTAACATAAAACCTATAAGTGC 167745 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | ||||| | || ||||| |||| || || || | ||| |||||||| || Sbjct 167744 GAAAGCACCATGAAGAGCAACAAAAGTCCACAGGCCGCCTAATTGACACCAACGAGTAAA 167685 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 |||||||||||| || ||||| || |||| | | || | | | | |||| Sbjct 167684 GTCTCCTTGTGCTTCGGGACCCCACAGTAACAATAAAGAGTGGGCTAAACTATTAGCAGG 167625 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || |||| || |||||||| || || || | ||| ||| || | ||||| Sbjct 167624 AGTAGAAACTGTCGCGGTTAAGAAATTGCAACCTTCCAAATAAGAACTGGCCAATCCATG 167565 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 ||||||||||| || || ||||| || ||| |||||||| || | | | ||| || Sbjct 167564 GGTATACCATGAAGTTACAAAGGTTGTACCTGTAAACCAACCTCCTAAGGCGAAATAAGC 167505 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 ||| | || || || || |||||||| |||| || || ||||| || ||| |||||| Sbjct 167504 ACACGAAAG-AGCAATAGCCCAGACCAACCTACAAAAACGAAACGGTCCCTCCGTAACCA 167446 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | | |||||| Sbjct 167445 GTCATCCATACTATCAAA 167428 >seq603 Length=500837 Score = 104 bits (114), Expect = 3e-17 Identities = 172/243 (71%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || || |||||||| || || || |||||||| ||||| || ||||| || || || Sbjct 53407 TGAGCAGTACAGATGTTGCTAGTAGCCTTGTCTCTCCTAATGTGTTGCTCCCTTGTCTGC 53466 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTT-CGC-TGTCCACTGACTGACCTACAATTCTGC 139434 | ||| | | |||| ||||| ||| | |||| || ||| | |||||| | Sbjct 53467 ATTGCCATACGAAGAGCAGACTTGCCAGACGCATCAACACTAAC--ACCAATAATTCTTC 53524 Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494 | || ||| ||||| |||| | | || || ||||| ||||||||||||||||| | Sbjct 53525 CTGGCATCAACCTCTTGTACTCTTGAGAGGTGGCCAAGAAAGCAGCATGAGGACCTCCAT 53584 Query 139495 ATCCCATAGGAATACCAAACCTTT--GCATACTACCTACAGCAATATCAAATCCCCACTC 139552 | |||||||| | |||||| || | || || || ||| |||||||| |||| | || Sbjct 53585 AACCCATAGGCACACCAAATCTCTGAGCTGAC--CCAACAACAATATCAGCTCCCAATTC 53642 Query 139553 ACC 139555 ||| Sbjct 53643 ACC 53645 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220 |||||||| | ||||| ||||||||| || || | |||||||| || || ||||| Sbjct 50195 AAATGGTGCCAAGTGTTTCTTTACACCAATGGGGCCCATACCAGGACCACCTCCACCATG 50254 Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGG 138280 |||||| |||||||| || |||| || |||||||| |||||||| ||| | | ||| Sbjct 50255 TGGAATGCAGAATGTTTTGTGTAGGTTGAGATGACAAACATCTGCTCCAATGAATCCTGG 50314 Query 138281 TTTTGCTAGACCTACCT 138297 ||| ||||| |||| Sbjct 50315 GCTTGTGAGACCAACCT 50331 Score = 82.4 bits (90), Expect = 9e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 138294 ACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATC 138353 ||||||||||| | || |||||||| | ||||| ||||| |||||||| |||| ||| Sbjct 50979 ACCTGTGCATTCATGTTGGCACCATCCATGTATACTTGACCTCCATTGTCGTGAATTATC 51038 Query 138354 TTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAA 138408 || || |||| || | |||| | ||||||||||| || |||||||||| Sbjct 51039 TTGCAGATCTCATCAATTCCTTCTTCATAGACACCATGAGTTGAAGGATATGTAA 51093 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| ||||| ||||| || || | ||||| | | || || || | || || || || Sbjct 53946 CATCGCCTCGGCTGCAGCCGTACCCTCATCAAGCAATGAGGCATTCGACATAGGCAAGCC 54005 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||||| || || || | ||||| ||||| || || | || || | |||||||| || Sbjct 54006 AGTAAGATCAGTAATCATAGTTTGATAATTCAACAATGACTCTAACCGACCCTGAGAAAT 54065 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 |||||||||||| || || || || |||||| ||||||||| Sbjct 54066 CTCAGCTTGATAAGGCGTATACTGAGTATACCAAGCAGGATTCTC 54110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578976593472760