Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2659 102 1e-15 >seq2659 Length=772501 Score = 102 bits (112), Expect = 1e-15 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 ||||| || || | | ||| || || || ||||| || | || ||||||||||||||| Sbjct 21243 TACTCCCCAACTCTCTTCTCAAAGAAATTAGTCTTCCCTTGAAGAGAGATCAACTCCATC 21184 Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819 || ||| ||||| | ||| ||||||| | ||||||| || | ||| | | Sbjct 21183 CAATCGAATGGGTTCTGAACTCCGTAAACCTTTTCGTACCCGAGCGCAGCCAACAGTCTG 21124 Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACC 868879 || || |||||||| |||||||| | ||| || | |||||| || | ||| |||| Sbjct 21123 TCTGCAACAAACTCAATGTACTGACTCATCAGCTCACAGTTCATCCCAACCAGCTTCACC 21064 Query 868880 GGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTC 868923 || |||| || | || |||||| |||||| ||||| || || Sbjct 21063 GGAAGCGCATCAGTTACGAACTCTCGCTCGATATCGACTGCATC 21020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106891939110121