Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2360 93.3 4e-14 >seq2360 Length=898569 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| | || || || | ||||| |||| ||||| | || | Sbjct 280303 ATGCAAATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTCGA-GACATC 280361 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || ||||| ||| | || || |||||| ||||| ||||||||||| || || || Sbjct 280362 TGACACTATTGAGAATGTCAAGACCAAAATTCAAGATAAGGAGGGTATACCACCGGACCA 280421 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| || ||||| | || || || || | || |||| |||| | | ||| ||||| Sbjct 280422 GCAGAGGCTCATCTTCGCTGGTAAGCAGTTGGATGATGGCAGAACTCTAGCCGACTACAA 280481 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGT 25383 || ||||| || ||||| | || ||||| Sbjct 280482 CATCCAAAAGGAGTCCACACTCCACTTAGT 280511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445077636632160