Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2306 185 1e-41 seq1925 176 5e-39 seq2360 168 8e-37 seq958 132 5e-26 seq2770 131 2e-25 seq1558 125 8e-24 seq2659 114 1e-20 seq2371 114 1e-20 >seq2306 Length=232912 Score = 185 bits (204), Expect = 1e-41 Identities = 180/230 (78%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| | || |||||||| || ||||| ||||||||| || Sbjct 176558 AATGCAGATTTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAG--AGC 176501 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| |||| ||| | |||||||| ||||||||||||||||| || || |||||| Sbjct 176500 TCGGATACAATTGATAATGTAAAGGCTAAGATTCAGGACAAGGAGGGGATCCCCCCAGAC 176441 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | || |||||||||||||| |||||||||| |||||||| || || || Sbjct 176440 CAGCAGAGGTTGATCTTTGCTGGTAAGCAGCTCGAGGATGGGCGTACCCTTGCTGATTAC 176381 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || ||||| || || ||||| || ||| | ||||| || ||||| Sbjct 176380 AACATTCAGAAGGAGTCTACCCTTCACCTTGTCCTCCGTCTCCGTGGTGG 176331 Score = 178 bits (196), Expect = 1e-39 Identities = 164/206 (80%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| |||||||| ||||| |||||| | ||||||||| || | Sbjct 177013 ATGCAGATTTTCGTCAAGACCCTTACCGGGAAGACCATTACTTTGGAGGTTGAG--AGCT 176956 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| ||| | ||| | || |||||||||||||| || ||||| ||||||| Sbjct 176955 CCGACACCATTGACAATGTTAAGACGAAGATTCAGGACAAGGAAGGTATTCCCCCAGACC 176896 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | ||||| ||||||||||| |||||||||| |||||| | || ||||| | Sbjct 176895 AGCAGAGGTTGATTTTCGCTGGTAAGCAGCTCGAGGATGGTCGTACTTTGGCCGACTACA 176836 Query 27584 ATGTCCAAAAGGAATCCACTCTTCAT 27609 | |||| ||||| |||||||| ||| Sbjct 176835 ACATCCAGAAGGAGTCCACTCTCCAT 176810 Score = 161 bits (178), Expect = 1e-34 Identities = 175/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||||||||| || || || ||||| || || || || || ||| || Sbjct 177242 AATGCAAATCTTTGTCAAGACTCTCACTGGGAAGACCATCACCCTCGAAGTCGAG--AGC 177185 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| |||| ||| | ||| |||| ||||| ||||||||||| ||||| |||||| Sbjct 177184 TCCGATACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAGGGTATTCCCCCAGAC 177125 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || ||| | | || || || || ||||| ||||| |||| || ||||| || ||||| Sbjct 177124 CAACAGAGGTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGGCGCACCCTTGCTGACTAC 177065 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||||| |||||| | || | ||||| || ||||| Sbjct 177064 AACATCCAGAAGGAGTCCACACTTCATTTGGTGCTCCGTCTGCGTGGTGG 177015 Score = 159 bits (176), Expect = 4e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| ||||| || ||||| || ||||| ||||||||| | Sbjct 177697 ATGCAAATCTTTGTGAAGACCCTTACTGGAAAGACCATCACTCTCGAGGTTGAGAGTTCT 177638 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||| |||| || || |||||||| |||||||| ||||||||| Sbjct 177637 GACACCATTGACAATGTCAAGACTAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 177578 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || || || || || || || ||||| | || |||||||| ||||| || Sbjct 177577 CAAAGGCTGATCTTCGCCGGAAAACAGCTGGAGGACGGCCGAACCCTAGCTGACTACAAC 177518 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | |||||||| || ||||| || || || | ||||| Sbjct 177517 ATTCAAAAGGAGTCAACTCTCCACCTTGTGCTCCGTCT 177480 Score = 154 bits (170), Expect = 2e-32 Identities = 174/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||||||||| || || || || ||||| || || || || || || || Sbjct 177470 AATGCAGATCTTTGTCAAAACCCTAACAGGAAAGACAATCACCCTCGAAGTGGAA--AGC 177413 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||||| || | ||||| |||||||| ||||||||||||||||| |||||| Sbjct 177412 TCCGACACCATTGACAACGTCAAGGCCAAAATTCAAGACAAGGAGGGAATTCCCCCAGAC 177353 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| | || || || || || ||||| |||||||||| || ||||| || ||||| Sbjct 177352 CAGCAAAGGCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCTGACTAC 177293 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || |||| ||||| || ||||| || || || | |||||| | || ||| Sbjct 177292 AACATCCAGAAGGAGTCAACTCTCCACCTTGTGCTCCGTCTTAGGGGAGGA 177242 Score = 145 bits (160), Expect = 9e-30 Identities = 157/206 (76%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| | ||||| ||||| ||||| || ||||||||| || Sbjct 176786 AATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACCCTGGAGGTTGAG--AGT 176729 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||||| ||||||||||||||||| || || || |||||| Sbjct 176728 TCGGACACCATCGACAATGTCAAGGCGAAAATTCAGGACAAGGAAGGCATCCCCCCAGAC 176669 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | |||||||| || ||||| || || |||| | || || || || || Sbjct 176668 CAGCAGAGGTTGATTTTTGCCGGCAAGCAGCTGGAAGATGGAAGGACTCTTGCGGATTAC 176609 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 ||| |||||||||| || || ||||| Sbjct 176608 AATATCCAAAAGGAGTCAACCCTTCA 176583 >seq1925 Length=318408 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| |||||||| || || || ||||| ||||||||| | Sbjct 244701 ATGCAAATCTTCGTTAAGACTCTTACCGGAAAAACCATAACTCTCGAGGTTGAGAGTTCT 244760 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || ||||| || |||||||||||||| ||||||||| Sbjct 244761 GACACCATCGACAATGTTAAGACGAAGATTCAAGATAAGGAGGGAATTCCCCCAGACCAG 244820 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| || ||||||| || || || || ||||| ||| Sbjct 244821 CAGCGTCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGCCGAACGCTCGCTGACTACAAT 244880 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | |||||| | || || Sbjct 244881 ATCCAGAAGGAGTCGACCCTCCACCTTGTTCTCCGTCTTAGAGGAGG 244927 Score = 149 bits (164), Expect = 7e-31 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| ||||| | || || || || || || | ||||| ||| || Sbjct 245840 AATGCAAATATTTGTTAAGACCTTGACTGGGAAAACCATCACCTTGGAGGTCGAG--AGC 245897 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | || | ||| | ||| |||| || ||||||||||| ||||||||||| ||| Sbjct 245898 TCAGACACTATCGATAATGTCAAGACTAAGATACAGGACAAGGAAGGAATTCCTCCTGAC 245957 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | ||||||||||||||||| | ||||| | || || | |||||||| Sbjct 245958 CAGCAGAGGTTGATTTTTGCTGGTAAGCAGTTGGAGGACGGGCGCACTTTGGCAGACTAC 246017 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || ||||||||||| ||||| || ||| | ||||| || ||||| Sbjct 246018 AACATTCAGAAGGAATCCACCCTTCACCTTGTCCTTCGTCTCCGTGGTGG 246067 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || || || |||||||| || |||||||| ||| | Sbjct 244929 ATGCAGATTTTTGTTAAGACCCTCACTGGGAAGACTATCACCCTTGAGGTCGAGAATTCT 244988 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || | |||||||| |||||||| || ||||| ||||||||| Sbjct 244989 GACACCATTGACAATGTCAAAACCAAAATTCAAGACAAGGAAGGTATTCCCCCAGACCAG 245048 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||| |||||||| || |||| || || || || || || || Sbjct 245049 CAGAGGTTGATCTTTGCTGGAAAGCAACTTGAAGATGGCCGCACTCTTGCTGATTACAAC 245108 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || | ||| | | ||||| Sbjct 245109 ATCCAGAAGGAGTCGACCCTCCACCTTGTTCTTCGTTTAAGAGGTGG 245155 Score = 140 bits (154), Expect = 4e-28 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || || || ||||| || || ||||||||||| || | Sbjct 245385 ATGCAGATTTTTGTTAAGACCCTCACTGGGAAGACCATCACCCTTGAGGTTGA--AAGCT 245442 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| ||| | || | |||||||| |||||||| || ||||| ||||||| Sbjct 245443 CCGACACCATTGACAATGTCAAAACCAAAATTCAAGACAAGGAAGGCATTCCCCCAGACC 245502 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | ||| | || || |||||||| ||||| || ||||| | |||||||| || || || | Sbjct 245503 AACAGAGACTGATCTTTGCTGGAAAGCAGCTTGAGGACGGGCGTACCCTTGCTGATTACA 245562 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | | || ||||| || || || ||||| || | ||| | | |||||| Sbjct 245563 ACATTCAGAAGGAGTCAACCCTCCATCTTGTGCTCCGTTTAAGAGGTGGA 245612 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || || |||||||| || ||||||||||| | Sbjct 245157 ATGCAGATCTTTGTTAAGACCCTCACTGGGAAGACTATCACCCTTGAGGTTGAAAGCTCT 245216 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || | ||||| || |||||||| || ||||| ||||| ||| Sbjct 245217 GATACAATTGACAATGTTAAAACCAAAATCCAAGACAAGGAAGGTATTCCCCCAGATCAG 245276 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || || || || ||||||| || || || || || || || Sbjct 245277 CAGAGGTTGATCTTTGCCGGAAAACAGCTTGAGGATGGCCGCACTCTTGCTGATTACAAC 245336 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || || || || || | |||||| | ||||| Sbjct 245337 ATCCAGAAAGAGTCGACCCTCCACCTGGTTCTCCGTCTTAGAGGTGG 245383 >seq2360 Length=898569 Score = 168 bits (186), Expect = 8e-37 Identities = 182/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || || |||||||| || || ||||||||| | | Sbjct 281215 ATGCAGATCTTCGTGAAGACCCTCACTGGGAAGACTATCACCCTCGAGGTTGAGACTTCT 281274 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| ||||| | || ||||||||||||||||| || || |||||||| Sbjct 281275 GATACAATTGAGAATGTGAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCAGACCAA 281334 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || |||||| | ||||||| ||| ||| | || || || || Sbjct 281335 CAGAGGCTCATCTTTGCAGGGAAGCAATTGGAGGATGGTCGAACCTTGGCTGATTACAAC 281394 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645 | || |||||||| || || ||||| || | |||||||| || || | | || |||| Sbjct 281395 ATTCAGAAGGAATCTACCCTCCATCTTGTTCTCCGTCTTCGTGGGGGTGATGCTTGAAGT 281454 Query 27646 T 27646 | Sbjct 281455 T 281455 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || || || |||||||| || || || ||||| ||| || | Sbjct 280303 ATGCAAATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGACATCT 280362 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | |||||||| || |||||||| || || || |||||| Sbjct 280363 GACACTATTGAGAATGTCAAGACCAAAATTCAAGATAAGGAGGGTATACCACCGGACCAG 280422 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || || ||||||||||| | || |||| | || ||||| ||||| || Sbjct 280423 CAGAGGCTCATCTTCGCTGGTAAGCAGTTGGATGATGGCAGAACTCTAGCCGACTACAAC 280482 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||||| || || ||||| | ||||| | ||||| Sbjct 280483 ATCCAAAAGGAGTCCACACTCCACTTAGTCCTCCGTCTGAGGGGTGG 280529 Score = 147 bits (162), Expect = 2e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| ||||| | || ||||| | Sbjct 280531 ATGCAGATCTTTGTCAAGACTCTGACAGGCAAGACGATTACCTTGGAAGTTGAAACTTCC 280590 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| ||||| | || || ||||| || ||||| || || ||||||||| Sbjct 280591 GACACCATTGAGAATGTGAAGACAAAGATACAGGATAAAGAGGGGATCCCACCAGACCAG 280650 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || ||||| || || ||||| || ||||||| || || || ||||||||||| Sbjct 280651 CAGAGGCTTATTTTCGCAGGGAAGCAGCTTGAGGATGGCCGGACTCTTGCAGACTATAAC 280710 Query 27586 GTCCAAAAGGAATCCACTCTTCAT 27609 | || ||||| || ||||| ||| Sbjct 280711 ATTCAGAAGGAGTCTACTCTGCAT 280734 Score = 147 bits (162), Expect = 2e-30 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||||||||| || || ||||| || || || ||||| || | Sbjct 280987 ATGCAAATCTTTGTTAAGACGCTTACTGGGAAAACTATCACCCTAGAAGTTGA--AAGCT 281044 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| ||| ||||| | || ||||| || |||||||| ||||| || |||| Sbjct 281045 CGGATACAATTGACAATGTGAAGACGAAGATTCAAGATAAGGAGGGCATTCCACCTGACC 281104 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || |||||||| ||||| || ||||||| | || | || || || | Sbjct 281105 AGCAGAGGATTATCTTTGCTGGGAAGCAGCTGGAGGATGGCAGGACTTTGGCTGATTACA 281164 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||||| || || ||| | ||| | || || | ||||| Sbjct 281165 ACATCCAAAAGGAATCAACCCTGCATTTGGTCCTCCGCCTCAGAGGTGG 281213 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || || || || || || || || || || || | Sbjct 280759 ATGCAGATTTTCGTGAAGACTCTCACTGGAAAAACCATCACCCTGGAAGTCGAAAGCTCT 280818 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | | | ||| | || ||||||||||| |||||||| || ||||||||| Sbjct 280819 GACACTATCGATATCGTTAAGACAAAGATTCAGGACAAAGAGGGAATCCCACCAGACCAG 280878 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| | || |||| || || | || || || ||| Sbjct 280879 CAGAGGCTGATCTTTGCAGGGAAGCAGTTGGATGATGGCCGGACATTGGCTGATTACAAT 280938 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| |||||||| || | || ||||| Sbjct 280939 ATCCAGAAGGAATCTACATTGCACCTAGT 280967 >seq958 Length=433838 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || || || || || || || || || || || || || || || Sbjct 312130 AATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAAGTCGAATCCTC 312071 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||| | ||| | || || || || |||||||| || || || || |||||||| Sbjct 312070 GGATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCAGACCA 312011 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||||| || || || || || || ||||| |||| || || |||| ||||| || Sbjct 312010 ACAACGTCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGACTACAA 311951 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||||||||||||||| || || | |||||||| ||||| Sbjct 311950 CATTCAGAAGGAATCCACTCTTCACCTTGTTCTTCGTCTTCGTGGTGG 311903 >seq2770 Length=737149 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || |||||||| |||||||| || || || ||||| | || ||||| ||||| ||| Sbjct 636726 ATGATGCAAATTTTTGTCAAAACCCTAACTGGCAAATCCATGACTCTCGAGGTCGAGAGT 636667 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| |||| ||| | ||| | |||||||| || || ||||| ||||| ||||| Sbjct 636666 TCTGATACAATTGATAATGTTAAGACCAAAATTCAAGATAAAGAGGGGATTCCCCCAGAT 636607 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || || ||||| || || || ||| ||| || ||||| || || ||| Sbjct 636606 CAGCAGCGTCTGATCTTCGCTGGAAAACAGCTTGAGAATGGCCGAACCCTTGCGGATTAT 636547 Query 27583 AATGTCCAAAAGGAATC 27599 | |||| ||||| || Sbjct 636546 AGCATCCAGAAGGAGTC 636530 >seq1558 Length=1070493 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || || || || || || || || |||||||| || Sbjct 239152 ATGCAGATATTCGTGAAAACCCTAACTGGGAAAACAATAACCCTAGAGGTTGAATCCTCA 239211 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| |||| || || |||||||| || || |||||||||||| Sbjct 239212 GACACCATCGACAATGTGAAGACTAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAG 239271 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || || || || || || | || || || || ||||| || Sbjct 239272 CAGCGTCTCATCTTCGCCGGAAAACAGCTTGAAGACGGCCGCACTCTCGCCGACTACAAC 239331 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| || || | ||||| | ||||| Sbjct 239332 ATCCAGAAGGAGTCGACCCTTCACCTGGTGCTTCGTCTCAGGGGTGG 239378 >seq2659 Length=772501 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64656 TGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGATGAATCGTGGGTCGTCGTTTGGTCA 64715 ||||| || |||||||| ||||| | || ||||| || ||| || |||| | | Sbjct 20746 TGTTAAGAAGAAGGCTGATTGGGCTCTTCGTTGGATTGATGGTGCAGAATCATTTGCTGA 20805 Query 64716 GCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTAT 64775 | | | |||||||| ||||| ||||| |||||||| || ||| || || || || Sbjct 20806 GAGGTTAATTGCTTTTGCTTGTGTTGAAGGGATTTTCTTCTCCGGGAGTTTTTGCTCCAT 20865 Query 64776 TTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTC 64835 |||||||| |||||||| || | ||||| ||| | | || |||||||||||||| || Sbjct 20866 CTTCTGGCTTAAAAAGCGTGGGTTAATGCCGGGTTTAACCTTCTCGAACGAGCTGATATC 20925 Query 64836 TCGGGACGAGGGGCTCCA 64853 || ||||| ||||| || Sbjct 20926 GCGAGACGAAGGGCTTCA 20943 >seq2371 Length=888473 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || ||||| || || || || || ||||||||||| | | Sbjct 99485 AATGCAAATATTTGTGAAAACTCTTACGGGTAAAACCATCACCCTTGAGGTTGAAACTAG 99544 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| || | ||||||||||| || ||||| || || |||| || || || Sbjct 99545 TGATACCATTAACAACGTCAAGGCTAAAATCCATGACAAAGAAGGCATTCAACCCGATCA 99604 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 | |||||| || || || | ||||| || || || || ||||| ||||| || || || Sbjct 99605 ACTGCGTCTCATCTTCGCCGAAAAGCAGCTTGAAGACGACCGTACTCTAGC-GATTACAA 99663 Query 27585 TGTCCA-AAAGG 27595 |||| ||||| Sbjct 99664 CATCCAGAAAGG 99675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570288920684560