Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq2002 902 0.0 seq1325 452 5e-122 seq1658 396 3e-105 seq2282 168 8e-37 seq2494 150 2e-31 seq23 118 1e-21 seq579 102 1e-16 seq2892 87.8 2e-12 seq2788 87.8 2e-12 seq147 84.2 3e-11 >seq2002 Length=1023113 Score = 902 bits (1000), Expect = 0.0 Identities = 1874/2772 (68%), Gaps = 92/2772 (3%) Strand=Plus/Minus Query 184457 TTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAGGATGGGATCATGTA 184516 |||||||||||||| ||||| ||||| || || || || ||||| | |||||||||||| Sbjct 174741 TTCCCTTGTGATGGACCTGGAAGAGGGGGAACATGCCAAGTATCCGCGTGGGATCATGTA 174682 Query 184517 TTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCTTCCACTTTAGTTGG 184576 ||| | || |||||||||||||| || || || ||||||| ||||| || |||||| Sbjct 174681 TTCTTAGGGTTATTCTGGATGTACAACGCAATTTCGGTAGTAATATTCCATTTCAGTTGG 174622 Query 184577 AGAATGCAA---GATGTATGGGGTC----------------------------TATCA-- 184603 | ||||||| ||||| |||||| ||||| Sbjct 174621 AAAATGCAATCAGATGTTTGGGGTAGTATAAATGATCAAGGGGTGGTAACTCATATCACA 174562 Query 184604 GGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACTT-----CT 184658 ||||| |||||||| | ||||| ||||| || ||||| ||| | | || || || Sbjct 174561 GGAGGAAACTTTGCGTAAAGTTCTATTACTATTAATGGGTGGCTCCGTGATTTAATTTCT 174502 Query 184659 TATGGTCACAGTCAAGTCAAGTTCTCAATAGTTATGGA--CAAGACATCAGCATGTATGG 184716 ||||| ||||| || | | || | | ||| || | ||| |||| |||| Sbjct 174501 TATGGGCACAGGCATCTAAGGTAATTCAGTCTTACGGCTCCTCATTATCTGCAT--ATGG 174444 Query 184717 TTTGCTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGAGTGG 184776 | | | || || || || |||||||||||||| || ||||| ||||| ||| || || Sbjct 174443 TCTCTTTTTCCTAGGTGCTCATTTTGTATGGGCTTTTAGTTTAATGTTTTTATTTAGCGG 174384 Query 184777 TAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTAAAACT 184836 | || || |||||||| | || || || || | |||||| ||||| |||||||| | Sbjct 174383 GCGCGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAGGT 174324 Query 184837 TGCACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGAGTTGC 184896 ||| ||| | | ||| || ||||| || |||| ||||||||||||||| ||||| | Sbjct 174323 TGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTATACAAGGACGTGCTGTAGGAGTAAC 174264 Query 184897 ACACTTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTCACCTTATCCC 184956 || | | | || || || ||||||||||||||||| |||||||| || |||| | Sbjct 174263 CCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTATTGC 174204 Query 184957 CTTAAGTTAAATCATGGCTACTA---------AAACA-----------AAATTTCCAAAA 184996 || | ||| |||||| | || || | |||||||| Sbjct 174203 AGTAGGATAA----TGGCTAGGAGGATTTGAAAAGCATTATGGCATTAAGATTTCCAAGG 174148 Query 184997 TTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGATTAGCAACT 185056 |||| |||| || || || || || ||| | | | |||| ||| | || || Sbjct 174147 TTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACC 174088 Query 185057 GCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGT-TATATCAAAAATTATT 185115 ||||||||||| ||||||||||| |||| || ||||| | || | ||||| || | || Sbjct 174087 GCACATGACTTCGAGAGTCATGATGATATTACTGAAGA-ACGTCTTTATCAGAATATTTT 174029 Query 185116 TGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAATTTAATTCA 185175 |||| | |||||||| || | ||||| || ||||| ||| | | || ||| | |||| Sbjct 174028 TGCTTCTCACTTTGGGCAATTAGCAATCATTTTTCTGTGGACTTCCGGAAATCTGTTTCA 173969 Query 185176 TATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACATGTGATACCTAT 185235 | |||| |||||||| || ||||| | ||| ||||| ||| || | |||||| Sbjct 173968 TGTAGCTTGGCAAGGAAATTTTGAGTCATGGGTACATGACCCTTTACACGTAAGACCTAT 173909 Query 185236 AGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGCATACACACAGGC 185295 || ||| ||| ||||||||||||||||||||| | || || | || | || Sbjct 173908 TGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCGGTTGTGGAAGCTTTTACTCGGGG 173849 Query 185296 AGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTGGTGGTACACAGT 185355 | | || | || ||||| | |||||||| | ||||| |||||||| ||| | Sbjct 173848 CGCT-CT--TGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAATGGTGGTATACAAT 173792 Query 185356 TGGTATGAGAACTAATATGCAACTGTATACTGGTGGTGCATTTATGATTCTACTAGCATT 185415 ||| | | |||||| | || |||||||| | | ||| | | | || | | Sbjct 173791 CGGTTTACGCACTAATCAAGATCTTTATACTGGAGCTCTTTTTCTATTATTTCTTTCTGT 173732 Query 185416 GGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGCACCTAAGCTTGCTTG 185475 |||||||||| || | | ||||| || ||||||| | ||| | || | || Sbjct 173731 TCTATCTTTACTAGGGGGTTGGTTACACCTACAACCAAAATGGAAACCGAGCGTTTCGTG 173672 Query 185476 GTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTATTTGGATTCAGTTC 185535 ||| ||| || || | | | || ||||| | || | || || || | ||||| Sbjct 173671 GTTCAAAAATGTCGAATCCCGTCTCAACCATCACTTGTCGGGACTCTTCGGCGTAAGTTC 173612 Query 185536 TATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCAAGAGGAATCACTGT 185595 | || ||| | || ||||| | || || || || |||||| | || ||| | || Sbjct 173611 CTTGGCTTGGACAGGACATTTAGTTCATGTCGCTATTCCTGCAGCCAGGGGAGAGTCCGT 173552 Query 185596 A-GATTGGACTAATTATGTGTTTATGAA--ACCTCATCCTGCAGGTTTACTGCCATTCTT 185652 ||||| | ||||| | | | | | | ||| |||||| ||| ||| ||| | || Sbjct 173551 TCGATTGAA-TAATT-TCT-TAAACGTATTACCACATCCTCAAGGATTAGGGCCCCTTTT 173495 Query 185653 TACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGATTAAATCAAATATTCAATAC 185712 |||||| | ||| | ||||||| ||||| || ||| | | ||| |||| ||| Sbjct 173494 TACAGGTTAGTGGAATCTTTATGCTCAAAACCCCGATTCAAGCAGTCATTTATTTGGTAC 173435 Query 185713 AACAGAGGGTTCTGGAACAGCAATATTAACA-TTCATGGGTGGTTTCCATCCACAAACAG 185771 | | || | ||||| || || |||| ||| |||| | |||| |||||||||| Sbjct 173434 CTCCCAAGGAGCAGGAACTGCCATTCTAACCCTTCTTGGGAGATTTC-ATCCACAAACGC 173376 Query 185772 AGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGAGTAATATTCATTA 185831 | |||||||| |||||||| || |||||||| | || || | | | || || || Sbjct 173375 AAAGTTTATGGTTAACTGATATTGCTCATCATCATTTAGCTATTGCATTTATTTTTCTTG 173316 Query 185832 TTGCAGGTCATATGTATAGAAGTG-CTTGGGGTATTGGTCACTCAATGAAGGAGATACTT 185890 |||| ||||||||||||||| ||| ||| ||||| ||| ||||| || | | Sbjct 173315 TTGCTAGTCATATGTATAGAACAAACTTTGGG-ATTGGGCACAGTATGAAAGATCTTTTA 173257 Query 185891 GAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAGGATTATATGAAACA 185950 |||||||||| || ||||| || || | || || ||||| || | ||||| ||| Sbjct 173256 GAAGCACATATTCCTCCAAGGGGGCGATTGGGACGTGGGCATAAGGGTCTTTATGACACA 173197 Query 185951 GTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCTAGGTGTTGTTACT 186010 | | | || | || | || ||||| ||||| || || ||| |||| ||| | ||| Sbjct 173196 ATCAACAATTCGATTCATTTTCAATTAGGACTTGCTCTAGCCTCTTTAGGGGTTATAACT 173137 Query 186011 AGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCATAGCACAGGCGCAT 186070 |||| || ||||| ||||| || | || | ||||| ||||||||||| | | Sbjct 173136 TCCTTGGTCGCCCAACACATGTATTCTTTACCGGCTTATGCATTCATAGCACAAGACTTT 173077 Query 186071 ACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCAACTGCTCTGATGGTTGGT 186130 ||||| |||||||| ||||| |||||| |||||||||||| | ||| || Sbjct 173076 ACTACTCAAGCTGCCTTATATACTCATCACCAATACATTGCAGGATTCATTATGACAGGA 173017 Query 186131 GCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTACTCTGAATAAGGAC 186190 |||||||| |||||||| |||||||| ||||||| | |||| | |||| | || Sbjct 173016 GCTTTTGCTCATGGAGCTATATTTTTCATTAGAGATTACAATCCGGAACAGAATGAAGAT 172957 Query 186191 AATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTCACTTAAGTTGGGTA 186250 ||||| | | |||||| || | || |||||||| || ||| || |||||||||| Sbjct 172956 AATGTATTGGCAAGAATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGGCC 172897 Query 186251 TCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATGATGTAGTAATGGCA 186310 || || | || |||||||| || || | ||||| ||||||||||| | | || Sbjct 172896 AGCCTCTTTTTAGGGTTCCATACCTTGGGTCTTTATGTTCATAATGATGTCATGCTTGCT 172837 Query 186311 TTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCACAGTGGATACAGGCA 186370 || ||| ||| || | ||| || || || ||||| |||||||| || |||||||| | Sbjct 172836 TTCGGTACTCCAGAAAAACAAATTTTGATCGAACCCATATTTGCTCAATGGATACAATCT 172777 Query 186371 GCATCA-GGTAAGATGATGTATGGATTAAGTTTCTTACTATCTGATCCAAATAGTG--CT 186427 || ||| || || | ||||| || | | | |||| ||| |||| | Sbjct 172776 GC-TCATGGGAAAACTTCATATGGGTTCGATGTACTTTTATCCT---CAACAAGTGGCCC 172721 Query 186428 GCAAGTCTAGCAGCAGAGA-GTATGCCTGGTAATCATTACTGGATGAGTGCTATGAATGA 186486 | | || | | | || |||| |||| | | |||| | | |||| | ||||| Sbjct 172720 GACATTCAATGTGGGGCGAAGTATA--TGGTTGCC-TGGCTGGTTAAATGCTGTTAATGA 172664 Query 186487 TCAAACAAACAGTCTGTTTCTACCAATAGGACCTGCTGATTTATTAGTTCATCATGCTAT 186546 | || || || || ||||||| || | || || || |||||||||||||| Sbjct 172663 GAGTAGTAATTCCCTATTCTTAACAATAGGGCCGGGAGACTTTTTGGTTCATCATGCTAT 172604 Query 186547 TGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGGTGCATTAGATGCTAGAGG 186606 ||| || || |||||||| || || || ||| |||| || ||||| |||||||| | || Sbjct 172603 TGCTCTAGGTTTACATACGACTACATTGATCTTAGTAAAAGGTGCTTTAGATGCACGCGG 172544 Query 186607 TTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATTCCCTTGTGATGGTCCAGG 186666 |||||| | || |||||||| || ||||| | ||| || ||||| ||||||||||| Sbjct 172543 TTCAAAGTTAATGCCAGATAAAAAGGATTTCTGTTATAGTTTTCCTTGCGATGGTCCAGG 172484 Query 186667 CAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTATCTCTCTGTGTTCTGGGC 186726 |||| ||||||||||||| ||| | ||| || || || ||| | | || |||||| Sbjct 172483 ACGAGGCGGTACTTGTGATATTTCGGCTTGTGACGCATTTTATTTGGCAGTTTTCTGGAT 172424 Query 186727 ATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAAGAACCTTGCTAGTTGGCA 186786 || ||||| || | |||| ||||||||||| ||||| || | | ||||| Sbjct 172423 GTTAAATACCATTGGGTGGGTTACCTTTTATTGGCATTGGAAACACATCACGTTATGGCA 172364 Query 186787 AGGTAATCAGGCACAATTCAATACATCAGGAACATATCTTATGGGTTGGTTCAGAGATTA 186846 |||||| ||||||| ||| ||| || ||| | ||||| ||||| |||||||| Sbjct 172363 GGGTAATGTTTCACAATTTAATGAATCTTCCACTTATTTGATGGGATGGTTAAGAGATTA 172304 Query 186847 TCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTACACACCATTTGGTATGAATAATCT 186906 ||| ||| || | | | | |||| | || | |||||||||||||||| | | Sbjct 172303 TCTATGGTTAAACTCTTCACAACTTATCAATTGATATAATCCATTTGGTATGAATAGTTT 172244 Query 186907 CTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAGTTTGGGCAACAGGATTTATGTT 186966 || || ||||| |||||||| || ||||| ||| | |||||||| || ||||||||||| Sbjct 172243 ATCGGTTTGGGCGTGGATGTTTTTATTTGGACATCTTGTTTGGGCTACGGGATTTATGTT 172184 Query 186967 CCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTGAGACTCTTGCTTGGGCACATCA 187026 | | ||||| ||| | || |||||||| ||||| ||||| ||| | || ||||| ||| | Sbjct 172183 CTTAATTTCGTGGCGTGGATATTGGCAGGAGTTGATTGAAACTTTAGCATGGGCTCATGA 172124 Query 187027 AAGAACTCCAATAGCAAATATAGCAGGTTGGAGAGATAAACCAGTGGCACTTTCTATTGT 187086 | || || | | ||| | | ||| |||||||||||||||| ||||| ||||| Sbjct 172123 ACTCACACCTTTGGTCAATTTGATTCGATGGGGAGATAAACCAGTGGCTCTTTCCATTGT 172064 Query 187087 TCAAGCAAGACTAGTTGGTTTATCACATTTTGCCATAGGATTTGTGCTTACCTATGCACC 187146 ||||||||| ||||||| ||| | || ||| || |||| | | | | || ||||| | Sbjct 172063 ACAAGCAAGATTAGTTGGATTAGCTCACTTTTCCGTAGGTTATATATTCACATATGCGGC 172004 Query 187147 ATTCCTGATAGC 187158 ||| |||| || Sbjct 172003 TTTCTTGATTGC 171992 Score = 367 bits (406), Expect = 2e-96 Identities = 696/1027 (68%), Gaps = 22/1027 (2%) Strand=Plus/Plus Query 190808 GATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCTGGTCTTATATTATTA 190867 |||||||||||| | || | || || || ||||||||||||| || | | || Sbjct 167440 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGGCTATTGCTCTTT 167499 Query 190868 CCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACATTTGTTACTAGTTGG 190927 | ||||||| | | | || |||||||| ||||| || || ||||| ||| ||| Sbjct 167500 CG-TGTGCTTATTTCGCCTTAGGAGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGG 167558 Query 190928 TATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTTTTGACAGCAGCAGTA 190987 ||||| |||||| | || ||| || | ||||| || || || || || |||| Sbjct 167559 TATACCCATGGATTGGCCAGTTCTTATTTGGAAGGTTGCAATTTCTTAACCGCGACAGTT 167618 Query 190988 TCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGGGGTCCAGAGGCACAA 191047 || || |||| | || | | | || |||||| || | |||||||| || |||||| Sbjct 167619 TCTACTCCTGCTAATAGTTTAGCCCACTCTTTATTGTTACTGTGGGGTCCCGAAGCACAA 167678 Query 191048 GGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACTTTGTAGCACTTCATGGT 191107 || ||| |||||||| ||| | || || || |||| ||||| || ||||||||| Sbjct 167679 GGAGACTTTACTCGTTGGTGTCAATTAGGCGGCCTGTGGACTTTTGTTGCTCTTCATGGT 167738 Query 191108 GTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCAGGATTGGTGGGTATT 191167 | || | || ||||| || ||||||||||| || || |||| ||| || | Sbjct 167739 GCTTTCGCACTTATAGGTTTTATGTTACGTCAATTCGAGCTTGCTCGATCCGTTCAATTG 167798 Query 191168 AGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTTCACAAGTGTATTCTTA 191227 | ||||| ||||| | || || |||| | || || ||||| ||||||| || Sbjct 167799 CGCCCTTATAATGCAATCGCATTATCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTA 167858 Query 191228 ATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATTTGGAGTTGCAGCAATC 191287 || |||||||| |||||| ||||||||||||||||| ||||| | ||||| || Sbjct 167859 ATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCACCTAGTTTTGGTATAGCAGCTATA 167918 Query 191288 TTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACACTCAACCCTTTCCACATG 191347 ||| ||| ||||| || ||||||| || || ||| ||||| || || || || ||| Sbjct 167919 TTTCGATTCATTCTCTTTTTTCAAGGGTTTCATAATTGGACACTGAATCCATTTCATATG 167978 Query 191348 ATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCATGGTGCTACAGTA 191407 ||||||||||| ||| | | || | || ||||||| || |||||||| ||||| ||| Sbjct 167979 ATGGGAGTTGCCGGTGTATTGGGCGCCGCTCTACTATGCGCTATTCATGGCGCTACCGTA 168038 Query 191408 CAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGTCAAGTTCAAAGTACAACC 191467 | || | || | ||| ||| ||| | | || |||| Sbjct 168039 GAAAATAATTTATTTGA------------------AGACGGTGATGGGGCAAATACA--- 168077 Query 191468 TTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTATGATCACTGCAAACAGA 191527 || | || ||| | ||||| || | || ||||||||||| ||| |||| || ||| | Sbjct 168078 TTCCGGGCTTTTAACCCAACCCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGC 168137 Query 191528 TTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATTTCTACACTTCTTGATG 191587 || ||||| || || ||||| |||| || || || ||| | | |||| ||||| ||| Sbjct 168138 TTTTGGTCCCAAATTTTTGGCGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATG 168197 Query 191588 TTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTATTGTAGGTCTTGCACTT 191647 || ||||| || |||| || | |||| | | || | || ||| | || | Sbjct 168198 TTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTATGGCTTTG 168257 Query 191648 AACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGTTT 191707 ||| || | || ||||| || | || || || || | ||||| ||||| || || ||| Sbjct 168258 AACCTACGTGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTT 168317 Query 191708 GAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGATGTCTTCA 191767 ||||| ||||| || || || ||||| | || |||||||| | || |||||| | | Sbjct 168318 GAAACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCT 168377 Query 191768 GTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCTAGAGGAAATGCA 191827 ||| || |||||||| ||| || | ||||| ||||| |||||||| | ||||| || Sbjct 168378 CAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCT 168437 Query 191828 TTGTAAT 191834 | |||| Sbjct 168438 CTTTAAT 168444 >seq1325 Length=385796 Score = 452 bits (500), Expect = 5e-122 Identities = 693/985 (70%), Gaps = 5/985 (1%) Strand=Plus/Plus Query 189665 TTCTGTGAGTGGGTAACATCAACA--AACAATAGAATCTATGTTGGTTGGTTTGGTGTAC 189722 |||||| | | | |||| ||||| || || || | ||| |||| ||||||||||| Sbjct 6985 TTCTGTAACTTGATAAC--CAACACTAAAAACAGTCTTTATATTGGATGGTTTGGTGTTT 7042 Query 189723 TCATGATTCCATGCTTGCTCGCAGCAGCAGCATGCTTCGTTGTTGCATTTATTGCAGCAC 189782 | ||||| ||| ||| | | ||| | | || || | || || ||||| || | Sbjct 7043 TGATGATCCCAACCTTATTGACTGCAACTTCTGTATTTATTTTAGCCTTCATTGCTGCTC 7102 Query 189783 CACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCACTTCTCTATGGTAACA 189842 | | ||||| |||||||| || | || | ||| | || || || || || || |||| Sbjct 7103 CTCTAGTAGATATTGATGGTATTCGTGAACTTGTTTCCGGGTCTCTACTTTACGGAAACA 7162 Query 189843 ACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGTCTACACTTCTACCCAA 189902 | || ||||| ||||| || | ||| | || ||||| || | ||||| || |||| Sbjct 7163 ATATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGGTTGCACTTTTATCCAA 7222 Query 189903 TCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGTCCTTACCAGTTGGTAA 189962 | ||||||||||| | || ||||||||| | ||||| || |||||||| | | | Sbjct 7223 TATGGGAAGCAGCGTCGGTTGATGAGTGGTTATACAACGGAGGTCCTTATGAACTAATTG 7282 Query 189963 TCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAGTGGGAATTATCATACA 190022 | | |||| | ||||| | || || ||||| | |||||||| | | | Sbjct 7283 TTCTAAACTTTTTACTTGGTGTAGCATGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 7342 Query 190023 GACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTG 190082 | || |||||| | |||||||| |||||| |||||||| || || | || || || Sbjct 7343 GTCTGGGTATGCGCCCTTGGATTGATGTTGCATATTCAGCTCCGGTTGCAGCGGCTACTG 7402 Query 190083 CAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGCCTTTAGGTA 190142 || ||| | | |||| | ||||||| || || ||||||||||||||| |||| | Sbjct 7403 TTGTTTTCTTGATCTACCTAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 7462 Query 190143 TCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACATAATATCCTTATGCACC 190202 |||| |||| |||||||| ||| |||||||||| || || || || ||||||||||| | Sbjct 7463 TCTCTAGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCATC 7522 Query 190203 CATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTATTCTCTGCAATGCATG 190262 |||| | ||| ||||||||| ||| |||| | || | | | ||| ||||||| Sbjct 7523 CATTTCGCATGTTAGGTGTAGCTGGTGTGTTCGAAGGCTCTCTTTATAGTGCTATGCATG 7582 Query 190263 GTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTAGAGTCACAGAACTATG 190322 |||| | ||||| ||| | | ||||| ||||| || || || || | | Sbjct 7583 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACATAAAATGAATCTGCTAATGAGG 7642 Query 190323 GTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCTGCTCATGGTTACTTTG 190382 |||||| || | ||||| |||||||| || || || ||||||||||||||||| || | Sbjct 7643 GTTACAGATTCAGGCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTCG 7702 Query 190383 GTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTTTACACTTCTTCTTAG 190442 | || | ||||| || |||||| ||||||||||| | ||||| ||||||||||| Sbjct 7703 GCCGATTGATCTTTCAATATGCTAGTTTCAACAACTCTCGTTCTTTAC-CTTCTTCTTAG 7761 Query 190443 CAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATTTGCACAATGGCATTCA 190502 | | | |||||| || | ||||| || | | |||||| | || ||||| |||| Sbjct 7762 CTGCTTGGCCTGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCCTTCA 7821 Query 190503 ACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGTAAAATTGTTCCAA 190562 |||||||||||||||| || ||||| |||||||||||| |||||| | ||| | Sbjct 7822 ACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTCATA 7881 Query 190563 CATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAAAGAAATG 190622 | |||| ||| | ||||| || ||| ||||||||||||| ||||||||| | |||| Sbjct 7882 CTTGGGCTGATATCATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACGTAATG 7941 Query 190623 CACACAACTTCCCACTAGACCTAGC 190647 | || |||||||| | ||||||||| Sbjct 7942 CTCATAACTTCCCTCAAGACCTAGC 7966 >seq1658 Length=355568 Score = 396 bits (438), Expect = 3e-105 Identities = 662/955 (69%), Gaps = 8/955 (1%) Strand=Plus/Minus Query 189701 TATGTTGGTTGGTTTGGTGTACTCATGATTCCATGCTTGCTCGCAGCAGCAGCATGCTTC 189760 ||| |||| ||||||||||| | ||||| || ||| | | ||| | | || Sbjct 187888 TATATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACTGCAACTTCTGTATTT 187829 Query 189761 GTTGTTGCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCA 189820 || | || || ||||| || || | |||| |||||||| || | || || ||| | Sbjct 187828 ATTATAGCCTTCATTGCTGCTCCTCTATTAGATATTGATGGTATTCGTGAACCTGTTTCC 187769 Query 189821 GGTTCACTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCT 189880 || || || || || || || || || ||||| ||| | || | ||| | | | | Sbjct 187768 GGGTCTCTACTTTACGGAAAGAATATTATTTCGGGTACCATTATTCCTACTTTTGCAGTT 187709 Query 189881 ATTGGTCTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAAT 189940 | || | ||||| || ||||| || ||||| || || ||||||||| | ||||| Sbjct 187708 GTAGGGTTGCACTTTTATCCAATATGAGAAGCGGCGTTGGTTGATGAGTGGTTATACAAC 187649 Query 189941 GGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGA 190000 ||||||||||| | | | | | ||||| | ||||| | || || ||||| Sbjct 187648 GGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCATGTTATATGGGT 187589 Query 190001 AGACAGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCA 190060 | |||||||| | | | | ||||||||| | |||||||| |||||| |||| | Sbjct 187588 CGTGAGTGGGAACTTAGTTTCCGTCTAGGTATGCGCCCTTGGATTGTTGTTGCATATTTA 187529 Query 190061 GCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTC 190120 || | | | || || ||| || ||| | | |||||| ||||||| || ||| Sbjct 187528 GCTCTGATTGCAGCGGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGATTT 187469 Query 190121 TCTGATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCA 190180 | ||||||||||||| ||| ||||| ||||| |||||||| ||| |||||||| | || Sbjct 187468 TATGATGGTATGCCTCTAGAAATCTCTGGTACTTTCAACTTTATGATTGTATTCTAGGCT 187409 Query 190181 GAACATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTA------TGTTT 190234 || || || ||||||||||| ||||| || ||| ||||||||| ||| ||| | Sbjct 187408 GAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGACCTGGTGTAT 187349 Query 190235 GGTGGAGCATTATT-CTC-TGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAG 190292 | || | || || ||| ||||||||||| | |||| ||| | | || || | Sbjct 187348 TCGGCCGCTCTCTTTCTAGTGCTATGCATGGTTCCTTGGTAATTTCTAGTTTGATTAGGG 187289 Query 190293 AAACAACTGGTTTAGAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACAT 190352 |||| || | || || || | ||||||| || || ||||| |||||||| | Sbjct 187288 AAACCACAGAAAATGAATCTGCTAATGAGGGTTACAGATTCGGGCAAGAGGAAGAAACTT 187229 Query 190353 ACAACATAGTAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCA 190412 | || || ||||||||||||||||| || | || | ||||| || ||| || |||| Sbjct 187228 ATAATATTGTAGCTGCTCATGGTTATTTCGCCCGATTGATCTTTCAATATACTAGTTTCA 187169 Query 190413 ACAACTCAAGAAGTTTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAA 190472 || |||| | |||||||||||||||||| | | |||||| || | ||||| | Sbjct 187168 ACTACTCTCGTTCTTTACACTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTA 187109 Query 190473 CATCAATGGGTATTTGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTG 190532 | | |||||| | || ||||| |||||||||||||||||||| || ||||| |||| Sbjct 187108 TTGCTTTAGGTATTAGTACTATGGCCTTCAACTTAAATGGTTTCAATTTCAACCAATCTG 187049 Query 190533 TAGTTGATGCACAAGGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACC 190592 |||||||| |||||| | || || |||| ||| | ||||| | || |||| Sbjct 187048 TAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATCATTAACCGTGCTAACC 186989 Query 190593 TTGGTATGGAAGTAATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 190647 ||||||||||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct 186988 TTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 186934 >seq2282 Length=966040 Score = 168 bits (186), Expect = 8e-37 Identities = 178/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 182499 TTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCTTGTCCATTGGATG 182558 ||||||| |||||||| || || || || || |||||||| |||||||| ||| Sbjct 423390 TTAAAATTTATGATACATGTATAGGGTGTACTCAATGTGTCCGAGCTTGTCCCACAAATG 423331 Query 182559 TATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCTTCCTCACCTAGAA 182618 ||||||||||| | ||||||||||| || | | |||| ||||| |||| | || |||| Sbjct 423330 TATTAGAAATGATACCTTGGGATGGATGTACATCAAAACAAATAGCTTTTGCTCCAAGAA 423271 Query 182619 CTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACAGACTTTTTAAGTA 182678 | || |||||||| || ||||||||||||||| | || | ||| || || ||||||||| Sbjct 423270 CAGAAGATTGTGTCGGTTGTAAGAGATGTGAATCCGCTTTTCCAACGGATTTTTTAAGTG 423211 Query 182679 TTCGTGTTTACTTGGGTGCA-GAAACCACAAGAAGCATGGGTCTAGCATATT 182729 |||| ||||| | | ||| |||||||| |||| |||||| ||| |||| Sbjct 423210 TTCGAGTTTATCTATG-GCATGAAACCACTCGAAGTATGGGTTTAGGTTATT 423160 >seq2494 Length=164379 Score = 150 bits (166), Expect = 2e-31 Identities = 203/280 (73%), Gaps = 6/280 (2%) Strand=Plus/Minus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||||| || |||| ||||||||||| ||||| || | || ||| | | | | || | Sbjct 163567 ACCTGTAACTATTCAATATCCTTATGAGAAATTGATCACATCGGAGCGTTTTCGTGGTCG 163508 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 || |||| ||| ||||||||||| |||||||||||||| ||||| | | |||||||| Sbjct 163507 AATTCACTTTGAATTTGATAAATGCATTGCTTGTGAAGTGTGTGTTCGTGCATGTCCTAT 163448 Query 188757 TAATTTACCTGTAGTTGATTGGGTAATG--AATAAACAAAC-TAAGAAGAAGGAACTTAG 188813 |||| ||||| ||||||||| | || ||| | | | ||||| || ||| Sbjct 163447 AGATTTGCCTGTTGTTGATTGGAAATTGCAAATGGATATTCGAAAGAAACAGTTGCTT-- 163390 Query 188814 AAATTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCC 188873 ||||| ||||| || || ||| || || ||||| |||||||| || || || || Sbjct 163389 -AATTACAGCATTGATTTCGGAATTTGTATATTTTGTGGTAATTGTGTTGAGTATTGCCC 163331 Query 188874 AACTAACTGTCTATCCATGACAGAAGAGTATGAACTATCT 188913 ||| || ||| |||| ||||| ||||| ||||| || ||| Sbjct 163330 AACAAATTGTTTATCAATGACTGAAGAATATGAGCTTTCT 163291 >seq23 Length=72938 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 182485 AATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGC 182544 |||||| || | ||||||| |||||||| || || | || || ||||||| || Sbjct 40830 AATGTCGCATTCAATTAAAATTTATGATACATGTATAAGGTGTACTGAATGTGTCCGTGC 40771 Query 182545 TTGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGC 182604 |||||| |||||||||||||||| | ||| | |||| || ||||| || ||||| || Sbjct 40770 TTGTCCCACGGATGTATTAGAAATGATATCTTAGAATGGATGTAAAGCGAAACAAATAGC 40711 Query 182605 TTCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTAC 182664 ||| | || ||||| || |||||||| || |||| ||||||||| | || || || | Sbjct 40710 TTCTGCTCCAAGAACAGAAGATTGTGTCGGTCGTAATAGATGTGAATCCGCTTGCCCAAT 40651 Query 182665 AGACTTTTTA 182674 || ||||| Sbjct 40650 GGATATTTTA 40641 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||| | || |||| ||||||||||| ||||| || | | | || | | | | || | Sbjct 51857 ACCTATAACTATTCAATATCCTTATGAGAAATTGATCACATTATAGCGTTTTCGTGGTCG 51798 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 | |||| ||| ||||||||||| |||||||||||||||||||| | | |||||||| Sbjct 51797 ATTTCACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGCATGTCCTAT 51738 Query 188757 TAATTTACCTGTAGTTGATTGG 188778 |||| ||||| |||||||| Sbjct 51737 AGATTTGCCTGTTTTTGATTGG 51716 >seq579 Length=36850 Score = 102 bits (112), Expect = 1e-16 Identities = 158/224 (71%), Gaps = 14/224 (6%) Strand=Plus/Plus Query 188698 ATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTATT 188757 || |||| ||| ||||||||||| ||| |||||||||| ||||| | | | |||||| Sbjct 19972 ATTCACTTTGAATTTGATAAATGCATTTCTTGTGAAGTGTGTGTTCGTGCATTTCCTATG 20031 Query 188758 AATTTACCTGTAGTTGATTG------GGTAATGAATAAACAAACTAAGAAGAAGGAACTT 188811 |||| | ||| || ||||| | |||| ||| ||| ||||| || ||| Sbjct 20032 GATTTGCTTGTTGTGGATTGGAAATCGCAAATGGATATTCAA---AAGAAATAGTTGCTT 20088 Query 188812 AGAAATTATTCAATTGACTTTGGTGCTTG--CATTTTCTGTGGGAATTGTGTAGAATACT 188869 ||||| ||||| ||||| ||| ||||| ||||| |||||||| || || | Sbjct 20089 ---AATTACAACATTGATTTTGGAATTTGTATATTTTTTGTGGTAATTGTGTTGAGTATT 20145 Query 188870 GTCCAACTAACTGTCTATCCATGACAGAAGAGTATGAACTATCT 188913 | ||| | || ||| |||| ||||| ||||| ||||| || ||| Sbjct 20146 GCCCACCAAATTGTTTATCAATGACTGAAGAATATGAGCTTTCT 20189 >seq2892 Length=679138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 186938 CATTTAGTTTGGGCAACAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAG 186997 ||| | |||||||| || |||||||||||| | ||||| ||| | || |||||||| ||| Sbjct 276791 CATCTTGTTTGGGCTACGGGATTTATGTTCTTAATTTCGTGGCGTGGATATTGGCAGGAG 276732 Query 186998 TTAATTGAGACTCTTGCTTGGGCACATCAAAGAACTCC 187035 || ||||| ||| |||| ||||| ||| || | || || Sbjct 276731 TTGATTGAAACTTTTGCATGGGCTCATGAACGCACACC 276694 >seq2788 Length=101554 Score = 87.8 bits (96), Expect = 2e-12 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 186078 AAGCTGCTCTATATGTTCATCATCAATACATTGCAACTGCTCTGATGGTTGGTGCTTTTG 186137 ||||||| ||||| ||||| |||||||||||| | ||| || ||||||| Sbjct 13233 AAGCTGCCTTATATACGCATCACCAATACATTGCAGGATTCATTATGACAGGAGCTTTTG 13292 Query 186138 CGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTACTCTGAATAAGGACAATGTTC 186197 | |||||||| |||||||| ||||||| | |||| | |||| | || ||||| Sbjct 13293 CTCATGGAGCTATATTTTTCATTAGAGATTACAATCCGGAACAGAATGAAGATAATGTAT 13352 Query 186198 TTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTCACTTAAGTTGGG 186248 | | |||||| || | || |||||||| || ||| || |||||||||| Sbjct 13353 TGGCAAGAATGTTAGACCATAAAGAAGCTATCATATCCCATTTAAGTTGGG 13403 >seq147 Length=62705 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 187055 TGGAGAGATAAACCAGTGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACAT 187114 |||||||||||||||||||| ||||| ||||| |||| |||| ||||||| ||| | || Sbjct 28253 TGGAGAGATAAACCAGTGGCTCTTTCCATTGTACAAGTAAGATTAGTTGGATTAGCTCAC 28312 Query 187115 TTTGCCATAGGATTTGTGCTTACCTATGCACCATTCCTGATAGC 187158 ||| || |||| | | | | || ||||| | ||| |||| || Sbjct 28313 TTTTCCGTAGGTTATATATTCACATATGCGGCTTTCTTGATTGC 28356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631403418873080