Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq758 167 6e-36 seq958 163 7e-35 seq1558 145 2e-29 seq2360 143 6e-29 seq1925 141 2e-28 seq2306 136 9e-27 seq2770 131 4e-25 seq2448 131 4e-25 seq392 100 7e-16 seq2499 95.1 3e-14 seq2737 93.3 1e-13 seq118 91.5 4e-13 >seq758 Length=475707 Score = 167 bits (184), Expect = 6e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||| ||||| || |||| ||||| ||||| ||||| Sbjct 367582 ACGAAGACGAAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCTAAAGT 367641 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| || ||||| || || ||||||||||| || || || || Sbjct 367642 GCGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGGCGTTGTTGGTCTGGTGGGATTCC 367701 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||||||||||||| || ||| ||||| ||||| |||| ||| || |||| Sbjct 367702 TTCTTTGTCTTGGATCTTTGCTTTGACATTGTCGATTGTGTCCGAGGATTCTACCTCTAG 367761 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || || ||||| | ||||| | ||| | |||||||| Sbjct 367762 GGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 367806 >seq958 Length=433838 Score = 163 bits (180), Expect = 7e-35 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||||||||| || || | ||||| ||||| ||||| Sbjct 311908 ACGAAGACGAAGAACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGCTAAAGT 311967 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| ||||| || || |||||||| || ||||||||||| || || || || Sbjct 311968 GCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCC 312027 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||| |||||||| || ||| |||||||| || |||| ||| || |||| Sbjct 312028 TTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCCGAGGATTCGACTTCTAG 312087 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || || ||||| | ||||| | ||| | |||||||| Sbjct 312088 GGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 312132 >seq1558 Length=1070493 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| ||||| | ||| | || ||| Sbjct 239363 AGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCT 239304 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || |||||||| || || || ||||| || || || |||||||||||| Sbjct 239303 TCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCT 239244 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||||||||||| ||| || |||| || || || Sbjct 239243 TGGATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCAACCTCTAGGGTTATTGTT 239184 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || | ||||| | ||| | ||||| || Sbjct 239183 TTCCCAGTTAGGGTTTTCACGAATATCTGCATCTT 239149 >seq2360 Length=898569 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | |||||| ||||| || ||||||| ||||| ||||| | |||||| ||||| Sbjct 280514 AGGACTAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCTAGAGTTCTGCCATCA 280455 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||||||||| || | || ||||| || || ||||| ||||| ||| Sbjct 280454 TCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGTATACCCTCCTTATCT 280395 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| ||| || || ||||| || || || || || | ||||| ||| Sbjct 280394 TGAATTTTGGTCTTGACATTCTCAATAGTGTCAGATGTCTCGACCTCGAGGGTGATGGTC 280335 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||||| | || | |||||| Sbjct 280334 TTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 280303 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || || || ||||| ||||||| |||||||| |||||||| || ||||| Sbjct 281198 AGGACCAAATGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGCCAAAGTCCTGCCATCC 281139 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||||||||| ||||||| | || ||||| || ||||| || ||||| ||| Sbjct 281138 TCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTGGAATGCCCTCCTTATCT 281079 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| || || || || ||| |||| || |||| ||||| || Sbjct 281078 TGAATCTTCGTCTTCACATTGTCAATTGTATCCGAGCTTTCAACTTCTAGGGTGATAGTT 281019 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | || | |||||| Sbjct 281018 TTCCCAGTAAGCGTCTTAACAAAGATTTGCAT 280987 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || ||||| || || || || | || || || || | ||| | ||||| || |||||| Sbjct 280733 TGCAGAGTAGACTCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCAAGCTGC 280674 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 ||||| ||||| ||||| | || ||||| || || || || || || || || |||||| Sbjct 280673 TTCCCTGCGAAAATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTATCCTGTATCTTT 280614 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||||||| || |||||||| || ||||| || || || || ||||||||||| ||| Sbjct 280613 GTCTTCACATTCTCAATGGTGTCGGAAGTTTCAACTTCCAAGGTAATCGTCTTGCCTGTC 280554 Query 225691 AAAGTTTT 225698 | ||| || Sbjct 280553 AGAGTCTT 280546 >seq1925 Length=318408 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || |||||||| || || | ||||| || |||||||| | ||| || Sbjct 246052 AGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCGTCC 245993 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| || || | | || ||||| || ||||| ||||||||||| Sbjct 245992 TCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 245933 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||| ||||||||| | || || || || ||||| || Sbjct 245932 TGTATCTTAGTCTTGACATTATCGATAGTGTCTGAGCTCTCGACCTCCAAGGTGATGGTT 245873 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || ||||| || || | || | ||||||| Sbjct 245872 TTCCCAGTCAAGGTCTTAACAAATATTTGCATT 245840 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || ||||| | ||||| || || | || |||||||| Sbjct 245824 AGCACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCTGCAAGGGTCCTCCCATCC 245765 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||||||||| || ||||| | || ||| || || || ||||| || ||||| || Sbjct 245764 TCGAGCTGCTTCCCTGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTATCC 245705 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||||||||||||| | || || || || ||||| || Sbjct 245704 TGAATCTTAGCCTTGACATTGTCGATGGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTT 245645 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || |||||||| || | ||| | ||||||| Sbjct 245644 TTCCCAGTCAAAGTCTTGACGAAAATTTGCATT 245612 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| || || || || |||| |||||| || || | |||| ||||| Sbjct 244912 AGAACAAGGTGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGCGAGCGTTCGGCCATCC 244853 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || ||||| || ||||| ||| Sbjct 244852 TCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTATCT 244793 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||||||||| || | || || || | || || || Sbjct 244792 TGAATCTTCGTCTTAACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGAGTTATGGTT 244733 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | ||| | |||||| Sbjct 244732 TTTCCGGTAAGAGTCTTAACGAAGATTTGCAT 244701 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| ||||| || || || || || | |||||||| || | || | ||| || Sbjct 245596 AGCACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCGTCC 245537 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| |||| |||||||| || ||||| |||||||||||| Sbjct 245536 TCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 245477 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || || ||| || |||||||| ||| |||| || || | ||||| ||| Sbjct 245476 TGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTC 245417 Query 225682 TTGCCCGT 225689 || || || Sbjct 245416 TTCCCAGT 245409 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| || || || || |||| |||||||| || | ||| | |||||| Sbjct 245140 AGAACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCT 245081 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||| ||||| | | || ||||| || |||||||||||||||||| Sbjct 245080 TCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCT 245021 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || || ||| || |||||||| || | || || || | ||||| ||| Sbjct 245020 TGAATTTTGGTTTTGACATTGTCAATGGTGTCAGAATTCTCGACCTCAAGGGTGATAGTC 244961 Query 225682 TTGCCCGT 225689 || || || Sbjct 244960 TTCCCAGT 244953 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || ||||| |||| |||||||| || | ||| | ||||| Sbjct 245368 AGAACCAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCC 245309 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| | | || || || || |||||||||||||||||| Sbjct 245308 TCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTGTCT 245249 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || || ||| || || || || ||| |||| || || | ||||| ||| Sbjct 245248 TGGATTTTGGTTTTAACATTGTCAATTGTATCAGAGCTTTCAACCTCAAGGGTGATAGTC 245189 Query 225682 TTGCCCGT 225689 || || || Sbjct 245188 TTCCCAGT 245181 >seq2306 Length=232912 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 ||||||||||| || || |||| ||||| ||||||||||| | ||||| || |||||| Sbjct 176811 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCGAGCTGC 176870 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || |||||||| || | | || ||||| || ||||||||||||||||| || ||||| Sbjct 176871 TTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGAATCTTC 176930 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||| || |||||||| ||| | || || || || || || ||||| || || Sbjct 176931 GTCTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTAATGGTCTTCCCGGTA 176990 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 | || || | ||| | ||||| Sbjct 176991 AGGGTCTTGACGAAAATCTGCAT 177013 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||||||||| || || || |||| ||||| || || | |||| ||||| Sbjct 177258 AGCACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTTCGGCCATCC 177317 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || | ||| ||||| || ||||| || ||||||||| Sbjct 177318 TCGAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATTCCCTCCTTGTCT 177377 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| || || |||||||| ||| ||||||| || | ||||| ||| Sbjct 177378 TGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCCACTTCGAGGGTGATTGTC 177437 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || | ||||| | || | |||||| Sbjct 177438 TTTCCTGTTAGGGTTTTGACAAAGATCTGCATT 177470 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||||||||| || || ||||| | ||||| || || | |||| || || Sbjct 177486 AGCACAAGGTGGAGAGTTGACTCCTTTTGAATGTTGTAGTCAGCTAGGGTTCGGCCGTCC 177545 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || |||||||| || | ||| ||||| || ||||| |||||||||||| Sbjct 177546 TCCAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATTCCTTCCTTGTCT 177605 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || |||||||| || | || || || | ||||| ||| Sbjct 177606 TGGATCTTAGTCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCGAGAGTGATGGTC 177665 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | || | |||||| Sbjct 177666 TTTCCAGTAAGGGTCTTCACAAAGATTTGCAT 177697 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || ||||| || || |||| ||||| || || | || | ||||||||| |||||| Sbjct 177039 TGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGCCCATCTTCGAGCTGC 177098 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || |||||||| | | |||||||| || |||||||| ||||||||||| ||||| Sbjct 177099 TTTCCGGCGAAGATCAACCTCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTA 177158 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||| || || || || ||| | || || || | ||||| ||||| || || Sbjct 177159 GACTTGACATTGTCAATAGTATCGGAGCTCTCGACTTCGAGGGTGATGGTCTTCCCAGTG 177218 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 | ||| || | || | ||||||| Sbjct 177219 AGAGTCTTGACAAAGATTTGCATT 177242 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || ||||||| ||||||||| || | ||| || |||||| Sbjct 176574 AGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCCGCAAGAGTCCTTCCATCT 176633 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || || || | | || ||||| || || || ||||||||||| Sbjct 176634 TCCAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCC 176693 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || || ||| ||| ||||||||||| || | || || || | || || ||| Sbjct 176694 TGAATTTTCGCCTTGACATTGTCGATGGTGTCCGAACTCTCAACCTCCAGGGTAATGGTC 176753 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || ||||| || || | ||| | |||||| Sbjct 176754 TTTCCGGTCAAGGTCTTGACGAAAATCTGCATT 176786 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || || || || || | |||||||| || | || | |||||| Sbjct 176346 AGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCC 176405 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| | | || ||||| || || || || |||||||| Sbjct 176406 TCGAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCC 176465 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| || || || || ||| | || || || | ||||| ||| Sbjct 176466 TGAATCTTAGCCTTTACATTATCAATTGTATCCGAGCTCTCAACCTCCAGAGTGATGGTC 176525 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| ||||| || || | || | |||||| Sbjct 176526 TTGCCAGTCAAGGTCTTCACAAAAATCTGCATT 176558 >seq2770 Length=737149 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||||||| ||| || | |||||| || ||||| || | ||||| Sbjct 635882 AGGACAAGGTGGAGGGTGGATTTTTTCTGAATATTGTAGTCAGCCAAGGTGCGTCCATCC 635941 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || |||||||| |||||||| | || || ||||| || | ||| || || ||||| Sbjct 635942 TCAAGTTGCTTCCCGGCGAAGATTAATCTCTGCTGGTCCGGGGAAATCCCCTCTTTGTCC 636001 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || |||||| |||| || |||||| | | || || | ||||| ||| Sbjct 636002 TGGATTTTAGTTTTCACATTATCGACAGTATCTGAGCTCTAAACCTCCAGGGTGATGGTC 636061 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || |||||||| || Sbjct 636062 TTCCCAGTCAAAGTCTT 636078 Score = 122 bits (134), Expect = 2e-22 Identities = 141/189 (75%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 ||||||| ||||||||| || | || |||||||| || |||||||||||||| || || Sbjct 636109 TTTTGGATATTGTAATCCGCAAGGGTCCTCCCATCATCAAGCTGCTTCCCAGCAAATATC 636168 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | | ||| ||||| | |||||||||||||| || || ||||| || ||| || Sbjct 636169 AACCTTTGCTGGTCCAGGGGAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTATCA 636228 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705 || ||||||||| | || || || || || || ||||| || ||| |||| || | || Sbjct 636229 ATCGTGTCTGAGCTCTCAACCTCCAAAGTTATAGTCTTCCCTGTC-AAGTCTTAACAAAA 636287 Query 225706 ACTTGCATT 225714 | ||||||| Sbjct 636288 ATTTGCATT 636296 Score = 100 bits (110), Expect = 7e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||| ||| || || || || |||| ||||||||| || | ||| | ||||| || | Sbjct 636298 CAAGATGGCCCGTCGACTCCTTCTGGATATTGTAATCAGCAAGAGTACGTCCATCCTCGA 636357 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 |||||||||||| ||||| | ||||| || || || || || || ||| | || | Sbjct 636358 GCTGCTTCCCAGTAAAGATCAACTTCTGTTGATCCGGGGGGATTCCCTCTTTGCCCTGAA 636417 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT-GATCGTCTTG 225684 |||| ||| ||| |||| ||||| ||| |||| || || || || || || || Sbjct 636418 TCTTGGTCTTAACATTGTCGACAGTGTCAGAGCTTTCAACCTCCAAGGTAAATTGTTTTC 636477 Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || |||||||| |||| || | ||||||| Sbjct 636478 CCTGTCAAAGTCTTTACAAATATTTGCATT 636507 >seq2448 Length=870776 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| || || | || || |||||||| || || | |||||||| || | || Sbjct 350516 ACGAAGTCGAAGCACCAAATGAAGCGTGGATTCCTTCTGAATGTTGTAATCTGCAAGTGT 350457 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| |||||||| | || |||||||| ||||| | |||||||| || || || || || Sbjct 350456 TCTTCCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGGATGCC 350397 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| |||||||||||||| || ||| ||||| ||||| || | ||| || ||||| Sbjct 350396 TTCTTTGTCTTGGATCTTGATTTTGACATTGTCGATTGTGTCGGATGATTCGACATCTAA 350337 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || || || || | ||||| | ||| | ||||| || Sbjct 350336 GGTTATGGTTTTACCAGTTAGGGTTTTCACGAAAATCTGCATATT 350292 >seq392 Length=533060 Score = 100 bits (110), Expect = 7e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | | Sbjct 314139 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 314080 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | |||||| |||| | | |||| || ||| || |||| Sbjct 314079 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 314020 Query 7855 GTTAGCT 7861 ||||||| Sbjct 314019 GTTAGCT 314013 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/104 (81%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826 ||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||| Sbjct 313472 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 313530 Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870 ||||| |||| || |||||||||||||| ||| ||| |||| Sbjct 313531 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 313574 >seq2499 Length=162655 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783 ||| || |||| ||||||| || | ||||| |||| ||||||||||||| ||||||||| Sbjct 110333 TATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGC 110274 Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843 || |||| | ||||| || |||||||||| |||||| || | | |||| | Sbjct 110273 TTGTACAGGCCCCCGTCGATTCCTTTGAGTTTCGGTCTTGCGACTGTGCTCCCCAGGCAG 110214 Query 7844 AATATTT-ACGCGTTAGCT 7861 | | ||| ||||||||||| Sbjct 110213 AGTGTTTCACGCGTTAGCT 110195 >seq2737 Length=743495 Score = 93.3 bits (102), Expect = 1e-13 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || |||||||||||||||| |||||||| ||||||| ||||||| |||| |||||||||| Sbjct 44612 AGGGGGTAGCGACTGTTTATTAAAAACATAGGACTCTGCTAAGTGGTAACACGATGTATA 44671 Query 372697 GGGTCTGACAC 372707 ||||||||| Sbjct 44672 AAGTCTGACAC 44682 >seq118 Length=66824 Score = 91.5 bits (100), Expect = 4e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAA-CACAGGACTCCGCTAAGTTGTAAAACGATGTAT 372695 || ||||| |||||||||| |||||| |||||||||| ||||||| |||| ||||||||| Sbjct 52636 AGGGGGTAACGACTGTTTATTAAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTAT 52577 Query 372696 AGGGTCTGACAC 372707 || ||||||||| Sbjct 52576 AGAGTCTGACAC 52565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192485163451022