Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq2306 82.4 6e-11 >seq2306 Length=232912 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || || | ||||| | ||||| ||| | ||||| || ||||| ||||||||||| || Sbjct 176559 CCTCCCCTCAATCGGAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCCGCA 176618 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | |||||||| || ||||| ||| | || | ||| || |||||| ||| Sbjct 176619 AGAGTCCTTCCATCTTCCAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGG 176678 Query 101132 ACGCCTTCTTTGTCGGCAATTTT 101154 | |||||| ||||| |||||| Sbjct 176679 ATGCCTTCCTTGTCCTGAATTTT 176701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409645756871367