Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2306 183 6e-41 seq958 178 3e-39 seq758 165 2e-35 seq1925 158 3e-33 seq2448 150 4e-31 seq1558 143 6e-29 seq2360 140 7e-28 seq2770 138 2e-27 seq2371 96.9 7e-15 >seq2306 Length=232912 Score = 183 bits (202), Expect = 6e-41 Identities = 180/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| ||| | ||| || || ||||||||||||||||| Sbjct 177014 ACCACCACGCAGACGGAGCACCAAATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGC 177073 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || || || || ||||| |||||||| | |||||||| || Sbjct 177074 AAGGGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGTTGGTCTGGGGG 177133 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 |||||||||||||||||| ||||| | || || | || ||||| | || |||| |||| Sbjct 177134 AATACCCTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTAT-CGGAGCTCTCGA 177192 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||||| ||||| ||||| || || | |||||| || || || |||||| Sbjct 177193 CTTCGAGGGTGATGGTCTTCCCAGTGAGAGTCTTGACAAAGATTTGCATT 177242 Score = 158 bits (174), Expect = 3e-33 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||||||||| || || || || || || | || || || || |||||||| |||| Sbjct 176329 AACCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAG 176388 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || || |||||||| || || || || ||||||||||| | || ||||| | Sbjct 176389 CAAGGGTACGCCCATCCTCGAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGG 176448 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCG 283049 | || ||||||||||| || ||||| || ||||| |||| || || |||| |||| || Sbjct 176449 GGATCCCCTCCTTGTCCTGAATCTTAGCCTTTACATTATCAATTGTATCCG-AGCTCTCA 176507 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || || |||||||| ||||| || ||||| ||||| || || ||||||||| Sbjct 176508 ACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAAATCTGCATT 176558 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||||||||| || || ||||||||||| || || || ||||| ||| Sbjct 177279 TCCTTCTGGATGTTGTAGTCAGCGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCGAAG 177338 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | ||| ||||| ||||| |||||||||||||| || || || || ||| | Sbjct 177339 ATCAGCCTTTGCTGGTCTGGGGGAATTCCCTCCTTGTCTTGAATTTTGGCCTTGACGTTG 177398 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || ||| |||||||| ||||| ||||| || || | || || || Sbjct 177399 TCAATGGTGTCGGAGCTTTCCACTTCGAGGGTGATTGTCTTTCCTGTTAGGGTTTTGACA 177458 Query 283089 AATATCTGCATT 283100 || ||||||||| Sbjct 177459 AAGATCTGCATT 177470 Score = 141 bits (156), Expect = 2e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| |||||||||||||| || || ||||| ||||| || ||||| ||||| ||| Sbjct 177507 TCCTTTTGAATGTTGTAGTCAGCTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCGGCGAAG 177566 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | ||| ||||| ||||| || ||||||||||||||||| | || || | Sbjct 177567 ATCAGCCTTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTAGTCTTGACATTG 177626 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| ||| || || ||||||||||| ||||| || || | ||||| || Sbjct 177627 TCAATGGTGTCAGAACTCTCAACCTCGAGAGTGATGGTCTTTCCAGTAAGGGTCTTCACA 177686 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 177687 AAGATTTGCAT 177697 Score = 113 bits (124), Expect = 9e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 || || |||| ||| | ||| || || |||||||||||||| || | || || ||| Sbjct 176799 CGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCA 176858 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 ||||| || || || || || || ||||| | || ||||| |||||||| |||||| Sbjct 176859 TCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTG 176918 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGAT 283063 || || ||||| | || || | || || |||| || |||| || || || | ||| || Sbjct 176919 TCCTGAATCTTCGTCTTAACATTGTCAATGGTGT-CGGAGCTCTCAACCTCCAAAGTAAT 176977 Query 283064 CGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || | ||||| ||||| |||||||| Sbjct 176978 GGTCTTCCCGGTAAGGGTCTTGACGAAAATCTGCAT 177013 >seq958 Length=433838 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||| ||| || || ||||||||||| || Sbjct 311902 ACCACCACGAAGACGAAGAACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGC 311961 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||||||||| || || ||||| ||||| ||||| | |||||||||||| || Sbjct 311962 TAAAGTGCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGG 312021 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || || ||||| |||||||| ||||| || | ||||| || ||||| | |||||| Sbjct 312022 GATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCCGAGGATTCGAC 312081 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||| || || || || |||||||| | || || ||||| ||||||||||| Sbjct 312082 TTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 312132 >seq758 Length=475707 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | || ||| || |||||||||||||| || Sbjct 367576 ACCACCACGAAGACGAAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGC 367635 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||| || || || || || ||||| || || | ||||||||||| || Sbjct 367636 TAAAGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAAATGAGGCGTTGTTGGTCTGGTGG 367695 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || || |||||||||||||||||||| || | ||||| |||||||| | ||| || Sbjct 367696 GATTCCTTCTTTGTCTTGGATCTTTGCTTTGACATTGTCGATTGTGTCCGAGGATTCTAC 367755 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || || || |||||||| | || || ||||| ||||||||||| Sbjct 367756 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 367806 >seq1925 Length=318408 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || || || ||||| || | || ||||| ||||||||||| |||||| Sbjct 245383 CCACCTCTAAGACGGAGAACCAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCAGCA 245324 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || ||||| |||||||||||||| | || || || ||| Sbjct 245323 AGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 245264 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||||||||| || | ||| || | || || || || || ||| || Sbjct 245263 ATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTGTCAATTGTATCAGAGCTTTCAACC 245204 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | |||||||| || |||||||| Sbjct 245203 TCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAGATCTGCAT 245157 Score = 150 bits (166), Expect = 4e-31 Identities = 148/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||| ||||||||||| ||||| ||||||||||| || || || || |||||| Sbjct 244891 TCCTTCTGGATATTGTAGTCAGCGAGCGTTCGGCCATCCTCCAGCTGCTTTCCAGCAAAG 244832 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| ||| || ||||| ||||| |||||||| ||||| ||||| | || || | Sbjct 244831 ATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTG 244772 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| ||| || || |||||||| || || || || || | |||||||||| Sbjct 244771 TCGATGGTGTCAGAACTCTCAACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACG 244712 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 244711 AAGATTTGCAT 244701 Score = 150 bits (166), Expect = 4e-31 Identities = 148/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||| |||||||| ||||||||||| || ||||| || || |||||| Sbjct 245119 TCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAAG 245060 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | || ||||| |||||||| ||||||||||| || || | ||| || | Sbjct 245059 ATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTTGGTTTTGACATTG 245000 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| ||| ||||| || || ||||| ||||| || || | |||||||| Sbjct 244999 TCAATGGTGTCAGAATTCTCGACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACA 244940 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 244939 AAAATCTGCAT 244929 Score = 149 bits (164), Expect = 1e-30 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| || || || | ||| ||| || || ||||||||||| || Sbjct 246067 CCACCACGGAGACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCTGCC 246008 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| || ||||| | || || || ||||| ||||| | || |||||| ||| Sbjct 246007 AAAGTGCGCCCGTCCTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGAGGA 245948 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || || |||||||| || ||||| | || || ||||||||||||| | |||| ||||| Sbjct 245947 ATTCCTTCCTTGTCCTGTATCTTAGTCTTGACATTATCGATAGTGTCTG-AGCTCTCGAC 245889 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | ||||| || || || ||||| |||||||| ||||| |||||| Sbjct 245888 CTCCAAGGTGATGGTTTTCCCAGTCAAGGTCTTAACAAATATTTGCATT 245840 Score = 143 bits (158), Expect = 6e-29 Identities = 149/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||| ||||| || | |||||||| || || ||||| |||||| Sbjct 245803 TCCTTTTGAATGTTGTAGTCTGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAG 245744 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||| || || ||||| |||||||| || || ||||| || || || | Sbjct 245743 ATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTG 245684 Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| || ||| || || || | |||||| || || || ||||||||||| || Sbjct 245683 TCGATGGTGTCTGA-GCTCTCAACCTCCAAAGTGATAGTTTTCCCAGTCAAAGTCTTGAC 245625 Query 283088 GAATATCTGCATT 283100 ||| || |||||| Sbjct 245624 GAAAATTTGCATT 245612 Score = 123 bits (136), Expect = 5e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || |||||||| |||||||| || || || ||||| || || || || |||||| Sbjct 245575 TCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCGTCCTCAAGCTGCTTTCCAGCAAAG 245516 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | |||||||| ||||| || ||||||||||| || || | ||| || | Sbjct 245515 ATCAGTCTCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATTTTGGTTTTGACATTG 245456 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || ||| || || || ||||| ||||| || || | |||||||| Sbjct 245455 TCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTAACA 245396 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 245395 AAAATCTGCAT 245385 >seq2448 Length=870776 Score = 150 bits (166), Expect = 4e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || ||||| |||| ||| | |||| ||| || || |||||||| || || Sbjct 350522 ACCCCCACGAAGTCGAAGCACCAAATGAAGCGTGGATTCCTTCTGAATGTTGTAATCTGC 350463 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||||| || | ||||||||| |||||||| || |||||||| || || Sbjct 350462 AAGTGTTCTTCCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGG 350403 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || || |||||||||||||| ||| || | ||||| ||||| || | |||||| Sbjct 350402 GATGCCTTCTTTGTCTTGGATCTTGATTTTGACATTGTCGATTGTGTCGGATGATTCGAC 350343 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | || || || ||||| || | || || ||||| |||||||| || Sbjct 350342 ATCTAAGGTTATGGTTTTACCAGTTAGGGTTTTCACGAAAATCTGCATATT 350292 >seq1558 Length=1070493 Score = 143 bits (158), Expect = 6e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || ||||| ||||| || | || || || |||||||||||||| || Sbjct 239379 ACCACCCCTGAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 239320 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| || || || ||||| ||||| ||||| | ||| || ||||| || Sbjct 239319 GAGAGTGCGGCCGTCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGG 239260 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| | || || | ||||| ||||| || | ||| || Sbjct 239259 GATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCAAC 239200 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || || || || || || || || | || || |||||||||||||| ||| Sbjct 239199 CTCTAGGGTTATTGTTTTCCCAGTTAGGGTTTTCACGAATATCTGCATCTTC 239148 >seq2360 Length=898569 Score = 140 bits (154), Expect = 7e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944 || || || || || || || ||| || ||||| ||||| ||||| | || |||||| Sbjct 280973 CGGAGCACTAGGTGCAATGTAGATTCCTTCTGGATATTGTAATCAGCCAATGTCCGGCCA 280914 Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004 || || | || ||||| |||||||||| | || ||||| || || ||||| ||| Sbjct 280913 TCATCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATTCCCTCTTTG 280854 Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064 || || ||||||| || ||| ||||||||||||| || ||||||||| || ||||| Sbjct 280853 TCCTGAATCTTTGTCTTAACGATATCGATAGTGTCAGAGCTTTCGACTTCCAGGGTGATG 280794 Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || | |||||| ||||| |||||||| Sbjct 280793 GTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 280759 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | ||||| || |||| ||| | || ||| |||||||||||||| ||||| Sbjct 281214 ACCACCTCTGAGGCGGAGGACCAAATGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGC 281155 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || | ||||||||| || || ||||| |||||||| | | || |||||| || Sbjct 281154 CAAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTGG 281095 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| ||||| ||||| | || || | || || || ||||| ||| || Sbjct 281094 AATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCCGAGCTTTCAAC 281035 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || ||||| || || || || | |||||||| || || ||||| Sbjct 281034 TTCTAGGGTGATAGTTTTCCCAGTAAGCGTCTTAACAAAGATTTGCAT 280987 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || ||||| | || ||| || || |||||||| ||||| Sbjct 281442 ACCCCCACGAAGACGGAGAACAAGATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGC 281383 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || |||||||| | ||| ||||| |||||||| | | |||||||| || Sbjct 281382 CAAGGTTCGACCATCCTCCAATTGCTTCCCTGCAAAGATGAGCCTCTGTTGGTCTGGGGG 281323 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| || ||||| | || || | || || || || |||| || || Sbjct 281322 GATACCCTCCTTGTCCTGAATCTTGGTCTTCACATTCTCAATTGTATCAGAAGTCTCAAC 281263 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 281262 CTCGAGGGTGATAGTCTTCCCAGTGAGGGTCTTCACGAAGATCTGCAT 281215 Score = 120 bits (132), Expect = 6e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||| ||||| ||||| || ||||||||||| || || ||||| || || Sbjct 280721 TCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCAAGCTGCTTCCCTGCGAAA 280662 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | || ||||| || || ||||| || || || ||||||| || || | Sbjct 280661 ATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTATCCTGTATCTTTGTCTTCACATTC 280602 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| |||| ||| ||||| | || |||||||| || |||| |||||| || Sbjct 280601 TCAATGGTGTCGGAAGTTTCAACTTCCAAGGTAATCGTCTTGCCTGTCAGAGTCTTGACA 280542 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 280541 AAGATCTGCAT 280531 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | ||| || || || | || | ||| || ||||||||||||||||| || Sbjct 280530 ACCACCCCTCAGACGGAGGACTAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAGTCGGC 280471 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | |||||| || | || || || || ||||| | | || ||||| || Sbjct 280470 TAGAGTTCTGCCATCATCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGTGG 280411 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| ||||| || || | || || | || |||||||| || | ||||| Sbjct 280410 TATACCCTCCTTATCTTGAATTTTGGTCTTGACATTCTCAATAGTGTCAGATGTCTCGAC 280351 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || |||| || || || || || ||||| Sbjct 280350 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 280303 >seq2770 Length=737149 Score = 138 bits (152), Expect = 2e-27 Identities = 161/215 (75%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || | ||| || || || | ||| || ||| || || ||||||||||| Sbjct 635867 CCACCACGGAGACCAAGGACAAGGTGGAGGGTGGATTTTTTCTGAATATTGTAGTCAGCC 635926 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||| |||||||| ||||| |||||||| ||||| || | || ||||| | | Sbjct 635927 AAGGTGCGTCCATCCTCAAGTTGCTTCCCGGCGAAGATTAATCTCTGCTGGTCCGGGGAA 635986 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || ||||| ||||| ||||| || | ||| || |||||| ||| || | |||| | || Sbjct 635987 ATCCCCTCTTTGTCCTGGATTTTAGTTTTCACATTATCGACAGTATCTG-AGCTCTAAAC 636045 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 || || ||||| ||||| || ||||||||||||| Sbjct 636046 CTCCAGGGTGATGGTCTTCCCAGTCAAAGTCTTAA 636080 Score = 105 bits (116), Expect = 1e-17 Identities = 140/193 (73%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||| ||||| |||||||| || || |||||||| || || ||||| | |||| Sbjct 636315 TCCTTCTGGATATTGTAATCAGCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGTAAAG 636374 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| ||||| || || || ||||| ||| | || ||||| | || || | Sbjct 636375 ATCAACTTCTGTTGATCCGGGGGGATTCCCTCTTTGCCCTGAATCTTGGTCTTAACATTG 636434 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGA-TCGTCTTACCCGTCAAAGTCTTAAC 283087 |||| |||||| || ||| || || | || | | || || || ||||||||||| || Sbjct 636435 TCGACAGTGTCAGAGCTTTCAACCTCCAAGGTAAATTGTTTTCCCTGTCAAAGTCTTTAC 636494 Query 283088 GAATATCTGCATT 283100 ||||| |||||| Sbjct 636495 AAATATTTGCATT 636507 >seq2371 Length=888473 Score = 96.9 bits (106), Expect = 7e-15 Identities = 138/193 (72%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||| ||||||||||| || || || || ||| | || || || || || |||| |||| Sbjct 99674 CTTTCTGGATGTTGTAATC-GCTAGAGTACGGTCGTCTTCAAGCTGCTTTTCGGCGAAGA 99616 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 | | ||| |||| || |||| || || ||||| ||||| || || || ||| | | Sbjct 99615 TGAGACGCAGTTGATCGGGTTGAATGCCTTCTTTGTCATGGATTTTAGCCTTGACGTTGT 99556 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 || || || || ||| || || || ||||| || |||||||| | ||| || || | Sbjct 99555 TAATGGTATCACTAGTTTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACAA 99496 Query 283090 ATATCTGCATTTT 283102 |||| |||||||| Sbjct 99495 ATATTTGCATTTT 99483 Score = 93.3 bits (102), Expect = 9e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||| |||||||||||||||||||| ||||||||||| || || || || || || |||| Sbjct 63080 CTTTCTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGA 63021 Query 282970 TCAAACGTTGTTGGTC 282985 |||||||||| ||||| Sbjct 63020 TCAAACGTTGCTGGTC 63005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046698791614502