Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1558 145 5e-30 seq2306 136 3e-27 seq1925 122 6e-23 seq758 109 4e-19 seq958 104 2e-17 seq2360 102 6e-17 seq2448 96.9 2e-15 seq2770 87.8 1e-12 >seq1558 Length=1070493 Score = 145 bits (160), Expect = 5e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||||||||| || |||||| ||||||||||| |||||||| ||| |||| || Sbjct 239361 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTC 239302 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||| || ||||| ||||| | ||||||||| |||| ||| | |||||||| || Sbjct 239301 AAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTG 239242 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | |||||||| | |||||| ||||| | || || || || Sbjct 239241 GATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCAACCTCTAGGGTTATTGTTTT 239182 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| |||||||| || ||||| Sbjct 239181 CCCAGTTAGGGTTTTCACGAATATCTGCAT 239152 >seq2306 Length=232912 Score = 136 bits (150), Expect = 3e-27 Identities = 171/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || |||| || | ||||| |||||| || |||||||||||| |||||||| Sbjct 176555 CATTCCTCCCCTCAATCGGAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATC 176614 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || | | || ||||||||||| |||||||| ||||| | |||||| |||| Sbjct 176615 CGCAAGAGTCCTTCCATCTTCCAGCTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCTGG 176674 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | |||||||| ||| || ||| ||| || ||| | |||||||| | Sbjct 176675 GGGGATGCCTTCCTTGTCCTGAATTTTCGCCTTGACATTGT--CGATGGTGTCCGAACTC 176732 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||| ||||| |||||||| || | |||||| ||||| || ||||| Sbjct 176733 TCAACCTCCAGGGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 176785 Score = 131 bits (144), Expect = 1e-25 Identities = 170/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || |||| | | ||||| || || ||| |||||| ||||||||||| || Sbjct 176783 CATTCCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 176842 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||| | || | || || |||||||| || || || ||||| | |||||| |||| Sbjct 176843 GGCCAAAGTACGACCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGG 176902 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | ||||||||| ||| |||||| ||| || ||| | |||||||||| | Sbjct 176903 GGGAATACCTTCCTTGTCCTGAATCTTCGTCTTAACATTGT--CAATGGTGTCGGAGCTC 176960 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||| ||||| ||||| || || |||||||| ||||| || ||||| Sbjct 176961 TCAACCTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTTGACGAAAATCTGCAT 177013 Score = 118 bits (130), Expect = 8e-22 Identities = 167/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || || || | | ||| ||||| || || ||||||||| |||||||| || Sbjct 177467 CATTCCTCCCCTGAGACGGAGCACAAGGTGGAGAGTTGACTCCTTTTGAATGTTGTAGTC 177526 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || || |||| |||||||| || ||||| ||||||| | ||||| |||| Sbjct 177527 AGCTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGG 177586 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | |||||||| || ||||| ||| || ||| | |||||||| | Sbjct 177587 GGGAATTCCTTCCTTGTCTTGGATCTTAGTCTTGACATTGT--CAATGGTGTCAGAACTC 177644 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || |||||||| || ||||||||||| ||||||||||| Sbjct 177645 TCAACCTCGAGAGTGATGGTCTTTCCAGTAAGGGTCTTCACAAAGATTTGCAT 177697 Score = 113 bits (124), Expect = 3e-20 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||||| ||||| ||| |||||| ||||||||||| || Sbjct 177011 CATACCACCACGCAGACGGAGCACCAAATGAAGTGTGGACTCCTTCTGGATGTTGTAGTC 177070 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || |||| | || || |||||||| ||||| |||||||| | ||| || |||| Sbjct 177071 AGCAAGGGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGTTGGTCTGG 177130 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | ||| ||||| || ||||| ||| || ||| | || || |||| | Sbjct 177131 GGGAATACCCTCCTTGTCTTGAATCTTAGACTTGACATTGT--CAATAGTATCGGAGCTC 177188 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || ||||| || ||||| ||||| || ||||||||||| Sbjct 177189 TCGACTTCGAGGGTGATGGTCTTCCCAGTGAGAGTCTTGACAAAGATTTGCAT 177241 Score = 107 bits (118), Expect = 1e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || || || | | ||| ||||| || || |||||| ||||||||||| Sbjct 177236 TTGCATTCCTCCCCTAAGACGGAGCACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTA 177295 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || ||||| || | || || |||||||| ||||| ||||||| | ||||| || Sbjct 177296 GTCAGCGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAGCCTTTGCTGGTC 177355 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | || ||||| || || || ||| | | | |||||||||| | Sbjct 177356 TGGGGGAATTCCCTCCTTGTCTTGAATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCT 177415 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | || || |||||||| || ||||| || || ||||| ||||| Sbjct 177416 TTCCACTTCGAGGGTGATTGTCTTTCCTGTTAGGGTTTTGACAAAGATCTGCAT 177469 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| || ||||||||||| || || ||| | || || Sbjct 176349 ACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCG 176408 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||||||||| | |||||| |||| || | || ||||| ||| Sbjct 176409 AGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGA 176468 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || || || | | || ||||||| || || ||||| Sbjct 176469 ATCTTAGCCTTTACATTATCAATTGTATCCGAGCTCTCAACCTCCAGAGTGATGGTCTTG 176528 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||||||| || || ||||| Sbjct 176529 CCAGTCAAGGTCTTCACAAAAATCTGCAT 176557 >seq1925 Length=318408 Score = 122 bits (134), Expect = 6e-23 Identities = 170/236 (72%), Gaps = 8/236 (3%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | |||||||| || || ||| || |||||||||||||| Sbjct 245387 CATGCCACCTCTAAGACGGAGAACCAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATC 245328 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || || ||||| || |||||||||||||| | ||||||||||| Sbjct 245327 AGCAAGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGG 245268 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT----CAATGTTCCTATGGTGTCGGCGG 44282 || | ||||||||| || || || || || || ||| | || || || | | Sbjct 245267 GGGAATACCTTCCTTGTC--TTGGATTTTGGTTTTAACATTGT--CAATTGTATCAGAGC 245212 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| ||||| | || || ||||| || ||||||||||| || ||||| |||||| Sbjct 245211 TTTCAACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAGATCTGCATG 245156 Score = 120 bits (132), Expect = 2e-22 Identities = 172/239 (72%), Gaps = 5/239 (2%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| |||||| ||||| | | | ||||| |||||| || ||||||||| ||||| Sbjct 245849 TATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGAATGTT 245790 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || || || | | | || || ||||||||||| ||||||||||| | ||||| Sbjct 245789 GTAGTCTGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATCAATCTTTGCTG 245730 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCG 44278 ||||| || | || ||||| ||| ||||| ||| || ||| | |||||||| Sbjct 245729 ATCTGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACATTGT--CGATGGTGTCT 245672 Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | || ||||||| || || || || || || | ||||| ||||| |||||||| Sbjct 245671 GAGCTCTCAACCTCCAAAGTGATAGTTTTCCCAGTCAAAGTCTTGACGAAAATTTGCAT 245613 Score = 118 bits (130), Expect = 8e-22 Identities = 167/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | || ||||| || || |||||| ||||| ||||| || Sbjct 244931 CATCCCTCCTCTAAGACGGAGAACAAGGTGGAGGGTCGACTCCTTCTGGATATTGTAGTC 244872 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| || | || ||||||||||| || |||||||||| ||||||||| |||| Sbjct 244871 AGCGAGCGTTCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGACGCTGCTGGTCTGG 244812 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 || | || ||||| || |||||| ||| || ||| | |||||||| | Sbjct 244811 GGGAATTCCCTCCTTATCTTGAATCTTCGTCTTAACATTGT--CGATGGTGTCAGAACTC 244754 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || || ||||| || || ||||| |||||||||||||| Sbjct 244753 TCAACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTCTTAACGAAGATTTGCAT 244701 Score = 114 bits (126), Expect = 9e-21 Identities = 170/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||| | | | ||| || || || || |||||| || |||||||| Sbjct 245618 TTGCATTCCACCTCTTAAACGGAGCACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTA 245559 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || || ||| |||| || |||||||| || |||||||||| | ||| || || Sbjct 245558 ATCAGCAAGGGTACGCCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTC 245499 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT----CAATGTTCCTATGGTGTCGG 44279 || || | |||||||| || || || || || || ||| | |||||||||| Sbjct 245498 TGGGGGAATGCCTTCCTTGTC--TTGAATTTTGGTTTTGACATTGT--CAATGGTGTCGG 245443 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||| ||||| | || || ||||| || ||||||||||| || || || |||||| Sbjct 245442 AGCTTTCAACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTAACAAAAATCTGCATG 245384 Score = 104 bits (114), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| |||||||||||||| || || ||| | || || Sbjct 245137 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCTTCA 245078 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || ||||||||||| | |||||| |||| || | ||||||||| || || Sbjct 245077 AGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTC--TT 245020 Query 44249 ATCTTCTGCTT----CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 || || || || ||| | |||||||| | || ||||| | || || || Sbjct 245019 GAATTTTGGTTTTGACATTGT--CAATGGTGTCAGAATTCTCGACCTCAAGGGTGATAGT 244962 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || ||||||||||| || || || ||||| Sbjct 244961 CTTCCCAGTGAGGGTCTTAACAAAAATCTGCAT 244929 >seq758 Length=475707 Score = 109 bits (120), Expect = 4e-19 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||||| ||||||||||| ||||| | ||| |||| || Sbjct 367595 ACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCGTCTTCG 367654 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| || || | || || || |||| || | ||||| || || Sbjct 367655 AGCTGCTTTCCGGCGAAAATGAGGCGTTGTTGGTCTGGTGGGATTCCTTCTTTGTCTTGG 367714 Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||||| || ||| | || ||||| | |||||| ||||| | || || || Sbjct 367715 ATCTT-TGCTTTGACATTGT--CGATTGTGTCCGAGGATTCTACCTCTAGGGTTATGGTT 367771 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| ||||||||||| ||||| Sbjct 367772 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 367803 >seq958 Length=433838 Score = 104 bits (114), Expect = 2e-17 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| ||||| || |||||||| ||||| | ||| | || || Sbjct 311921 ACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCG 311980 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || ||||| ||||| | ||| || || |||| || | ||||| || ||| Sbjct 311981 AGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTCCTGG 312040 Query 44249 ATCTTCTGCTT---CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| |||| || ||| | ||||| || | |||||| || || | || || || Sbjct 312041 ATCTTG-GCTTTGACATTGT--CGATGGTATCCGAGGATTCGACTTCTAGGGTTATGGTT 312097 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| ||||||||||| ||||| Sbjct 312098 TTACCCGTTAGGGTTTTCACGAAGATCTGCAT 312129 >seq2360 Length=898569 Score = 102 bits (112), Expect = 6e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| | | ||| ||||| | || ||||| ||||| ||||| Sbjct 280992 TTGCATGCCTCCTCTCAACCGGAGCACTAGGTGCAATGTAGATTCCTTCTGGATATTGTA 280933 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| || | | || | || |||| ||||||||| |||||||||| | |||||| || Sbjct 280932 ATCAGCCAATGTCCGGCCATCATCCAACTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTC 280873 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | || || || ||| ||||| ||| | | | || ||||| | | Sbjct 280872 TGGTGGGATTCCCTCTTTGTCCTGAATCTTTGTCTTAACGATATCGATAGTGTCAGAGCT 280813 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||| || || || ||||| ||||| ||||||||||| || ||||| Sbjct 280812 TTCGACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 280759 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || ||||| || || || || || | || || ||||||||||| || || Sbjct 280722 CTCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCAAGCTGCTTCCCTGCGAA 280663 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | | |||||| |||| || | || || || ||| |||||| ||||| | Sbjct 280662 AATAAGCCTCTGCTGGTCTGGTGGGATCCCCTCTTTATCCTGTATCTTTGTCTTCACATT 280603 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||||| | ||| || |||| ||||||||||| || || || ||||| || Sbjct 280602 CTCAATGGTGTCGGAAGTTTCAACTTCCAAGGTAATCGTCTTGCCTGTCAGAGTCTTGAC 280543 Query 44326 GAAGATTTGCAT 44337 ||||| ||||| Sbjct 280542 AAAGATCTGCAT 280531 Score = 95.1 bits (104), Expect = 9e-15 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 ||||| || ||||||||||| || | ||| || | || |||| |||||||| |||| Sbjct 281405 TCCTTCTGAATGTTGTAATCAGCCAAGGTT--CGACCATCCTCCAATTGCTTCCCTGCAA 281348 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 |||| | | ||| || |||| || | ||| ||||| ||| ||||| ||||| Sbjct 281347 AGATGAGCCTCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTGAATCTTGGTCTTCACAT 281288 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || || || | | || ||||| | || || ||||| || ||||||||||||| Sbjct 281287 TCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTCTTCCCAGTGAGGGTCTTCA 281228 Query 44325 CGAAGATTTGCAT 44337 ||||||| ||||| Sbjct 281227 CGAAGATCTGCAT 281215 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | | || | ||| || ||| |||||||||||||||||| || Sbjct 280533 CATACCACCCCTCAGACGGAGGACTAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAGTC 280474 Query 44167 GGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 ||| ||||| | | || |||| |||||| || || ||||| | | |||||| || Sbjct 280473 GGCTAGAGTT--CTGCCATCATCCAACTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCC 280416 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | || | ||| ||||| || || || ||| | | | || ||||| | | Sbjct 280415 GGTGGTATACCCTCCTTATCTTGAATTTTGGTCTTGACATTCTCAATAGTGTCAGATGTC 280356 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || ||||| || || ||||| ||||| ||||||||||| Sbjct 280355 TCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATTTGCAT 280303 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||||||||||||||| || | | | || |||||||||||||| |||||| Sbjct 281177 TCCTTTTGGATGTTGTAATCAGCCAAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAG 281118 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | | |||||| || | || | || ||||| || |||||| ||||| | Sbjct 281117 ATAATCCTCTGCTGGTCAGGTGGAATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTG 281058 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || || || | | ||| || || | || || || || || || || ||||| || Sbjct 281057 TCAATTGTATCCGAGCTTTCAACTTCTAGGGTGATAGTTTTCCCAGTAAGCGTCTTAACA 280998 Query 44327 AAGATTTGCATG 44338 |||||||||||| Sbjct 280997 AAGATTTGCATG 280986 >seq2448 Length=870776 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 ||||| | |||| | ||||| ||||||||| ||||| || ||||||||||| || Sbjct 350521 CCCCCACGAAGTCGAAGCACCAAATGAAGCGTGGATTCCTTCTGAATGTTGTAATCTGCA 350462 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 ||| | | || |||| || ||||| |||||||| || || || ||||||| || Sbjct 350461 AGTGTTCTTCCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGGTGGG 350402 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | ||||| || || ||||| || || ||| | || ||||||| ||||| | Sbjct 350401 ATGCCTTCTTTGTCTTGGATCTTGATTTTGACATTGT--CGATTGTGTCGGATGATTCGA 350344 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || || || || || ||||| |||||||| || ||||| Sbjct 350343 CATCTAAGGTTATGGTTTTACCAGTTAGGGTTTTCACGAAAATCTGCAT 350295 >seq2770 Length=737149 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/214 (70%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||| || ||| || || ||||||||| |||||||| || || | | | || Sbjct 636084 CAGCACCAAGTAAAGGGTAGACTACTTTTGGATATTGTAATCCGCAAGGGTCCTCCCATC 636143 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || ||||||||||| ||||| ||||| | ||||| || || | ||||||||| || Sbjct 636144 ATCAAGCTGCTTCCCAGCAAATATCAACCTTTGCTGGTCCAGGGGAATACCTTCCTTATC 636203 Query 44245 CGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 | ||||| |||| | || | || ||||| | | || ||||||| || || | Sbjct 636204 CTGAATCTT-GGCTTTGACATTATCAATCGTGTCTGAGCTCTCAACCTCCAAAGTTATAG 636262 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || | ||||| || || |||||||| Sbjct 636263 TCTTCCCTGTCA-AGTCTTAACAAAAATTTGCAT 636295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359977180815021