Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq958 185 2e-41 seq758 185 2e-41 seq2306 178 3e-39 seq2360 174 4e-38 seq1558 174 4e-38 seq1925 159 8e-34 seq2448 147 5e-30 seq2770 132 1e-25 seq2371 118 3e-21 seq2382 84.2 5e-11 >seq958 Length=433838 Score = 185 bits (204), Expect = 2e-41 Identities = 171/216 (79%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || ||||||||||| || || || ||||| || ||||| || || ||| Sbjct 312132 AAAATGC---AGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAAGTCGAA 312076 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || |||||||| || |||||| ||||| |||||||||||||| ||||| || Sbjct 312075 TCCTCGGATACCATCGACAATGTCAAAGCCAAGATCCAGGACAAAGAAGGCATCCCACCA 312016 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| ||||| || ||||||||||||||||||||||||||||| | ||| | ||||| Sbjct 312015 GACCAACAACGTCTCATCTTCGCCGGAAAACAGCTCGAAGATGGCCGCACTTTAGCCGAC 311956 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 || ||| | || || ||||| || || || |||||| Sbjct 311955 TACAACATTCAGAAGGAATCCACTCTTCACCTTGTT 311920 >seq758 Length=475707 Score = 185 bits (204), Expect = 2e-41 Identities = 171/216 (79%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || ||||||||||| || || || ||||| || ||||| ||||| ||| Sbjct 367806 AAAATGC---AGATCTTCGTGAAAACCCTAACGGGTAAAACCATAACCCTAGAGGTAGAA 367750 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| ||||| ||||| || |||||| |||||| || ||||||||||||||||| || Sbjct 367749 TCCTCGGACACAATCGACAATGTCAAAGCAAAGATCCAAGACAAAGAAGGAATCCCACCA 367690 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| ||||| || || ||||||||||| ||||||||||| || | ||| | ||||| Sbjct 367689 GACCAACAACGCCTCATTTTCGCCGGAAAGCAGCTCGAAGACGGCCGCACTTTAGCCGAC 367630 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 || ||| |||| || ||||| || || || |||||| Sbjct 367629 TACAACATCCAGAAGGAATCGACTCTTCACCTTGTT 367594 >seq2306 Length=232912 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || |||||||| || ||||||||||| ||||||||||| ||| Sbjct 177466 CAGATCTTTGTCAAAACCCTAACAGGAAAGACAATCACCCTCGAAGTGGAAAGCTCCGAC 177407 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| || ||||| ||||| || ||||| || || ||||||||| Sbjct 177406 ACCATTGACAACGTCAAGGCCAAAATTCAAGACAAGGAGGGAATTCCCCCAGACCAGCAA 177347 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || |||||||||||||| |||||||| ||||| | || || || || || ||| || Sbjct 177346 AGGCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACCCTCGCTGACTACAACATC 177287 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || || ||||| Sbjct 177286 CAGAAGGAGTCAACTCTCCACCTTGT 177261 Score = 163 bits (180), Expect = 7e-35 Identities = 160/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || ||||| || || ||||| ||||| || || || ||| Sbjct 176782 CAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACCCTGGAGGTTGAGAGTTCGGAC 176723 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct 176722 ACCATCGACAATGTCAAGGCGAAAATTCAGGACAAGGAAGGCATCCCCCCAGACCAGCAG 176663 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || ||||| || ||||| |||||||||||||||||||| ||||| || || Sbjct 176662 AGGTTGATTTTTGCCGGCAAGCAGCTGGAAGATGGAAGGACTCTTGCGGATTACAATATC 176603 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || ||||| || || |||| Sbjct 176602 CAAAAGGAGTCAACCCTTCA-CTTG 176579 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||| || || || ||||| || ||||| |||||||| || || || ||| Sbjct 177694 CAAATCTTTGTGAAGACCCTTACTGGAAAGACCATCACTCTCGAGGTTGAGAGTTCTGAC 177635 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| || ||||| |||||||| || || ||||||||| Sbjct 177634 ACCATTGACAATGTCAAGACTAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGCAA 177575 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || |||||||||||||||||||| || || || | || || || || || ||| | Sbjct 177574 AGGCTGATCTTCGCCGGAAAACAGCTGGAGGACGGCCGAACCCTAGCTGACTACAACATT 177515 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || ||||| || || ||||| Sbjct 177514 CAAAAGGAGTCAACTCTCCACCTTGT 177489 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || |||||||| || || || ||||||||||| || || ||||| || Sbjct 177238 CAAATCTTTGTCAAGACTCTCACTGGGAAGACCATCACCCTCGAAGTCGAGAGCTCCGAT 177179 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||| ||||| || || || || || ||||| || Sbjct 177178 ACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAACAG 177119 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | |||||||||||||| |||||||||||||| | || ||||| || || ||| || Sbjct 177118 AGGTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGGCGCACCCTTGCTGACTACAACATC 177059 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || ||||| ||| Sbjct 177058 CAGAAGGAGTCCACACTTCAT 177038 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || | || || || || ||||| || ||||| || ||||| || Sbjct 176554 CAGATTTTTGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAGAGCTCGGAT 176495 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||||||||| || || ||||| || |||||||| Sbjct 176494 ACAATTGATAATGTAAAGGCTAAGATTCAGGACAAGGAGGGGATCCCCCCAGACCAGCAG 176435 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || |||||||| ||||| | || ||||| ||||| ||| | Sbjct 176434 AGGTTGATCTTTGCTGGTAAGCAGCTCGAGGATGGGCGTACCCTTGCTGATTACAACATT 176375 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 176374 CAGAAGGAGTCTACCCTTCACCTTGT 176349 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || || || || || | ||||| || ||||| ||| Sbjct 177010 CAGATTTTCGTCAAGACCCTTACCGGGAAGACCATTACTTTGGAGGTTGAGAGCTCCGAC 176951 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||||||||| ||||| || || || |||||||| Sbjct 176950 ACCATTGACAATGTTAAGACGAAGATTCAGGACAAGGAAGGTATTCCCCCAGACCAGCAG 176891 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || ||||| || || |||||||| ||||| | ||| | ||||| || ||| || Sbjct 176890 AGGTTGATTTTCGCTGGTAAGCAGCTCGAGGATGGTCGTACTTTGGCCGACTACAACATC 176831 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || || || ||| Sbjct 176830 CAGAAGGAGTCCACTCTCCAT 176810 >seq2360 Length=898569 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| |||||||| |||||||| |||||||| || || |||||||| ||| Sbjct 280762 CAGATTTTCGTGAAGACTCTCACTGGAAAAACCATCACCCTGGAAGTCGAAAGCTCTGAC 280821 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| | ||| || |||||||||||||||||| |||||||| || |||||||| Sbjct 280822 ACTATCGATATCGTTAAGACAAAGATTCAGGACAAAGAGGGAATCCCACCAGACCAGCAG 280881 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || || ||| | || ||||| |||| | || ||||| || || Sbjct 280882 AGGCTGATCTTTGCAGGGAAGCAGTTGGATGATGGCCGGACATTGGCTGATTACAATATC 280941 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| ||| |||| || || Sbjct 280942 CAGAAGGAATCTACATTGCACCTAGT 280967 Score = 149 bits (164), Expect = 2e-30 Identities = 155/201 (77%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || |||||||| || || || || || |||||||||||||| || | || ||| Sbjct 280306 CAAATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGACATCTGAC 280365 Query 177984 ACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 || || ||||| ||||| || ||| ||||| || || || || || || ||||||||||| Sbjct 280366 ACTATTGAGAATGTCAAGACCAAA-ATTCAAGATAAGGAGGGTATACCACCGGACCAGCA 280424 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 | || |||||||| || || ||| | || ||||| || ||||| ||||| || ||| | Sbjct 280425 GAGGCTCATCTTCGCTGGTAAGCAGTTGGATGATGGCAGAACTCTAGCCGACTACAACAT 280484 Query 178103 CCAAAAAGAATCAACACTGCA 178123 |||||| || || ||||| || Sbjct 280485 CCAAAAGGAGTCCACACTCCA 280505 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || |||||||||||||| || | || || Sbjct 281218 CAGATCTTCGTGAAGACCCTCACTGGGAAGACTATCACCCTCGAGGTTGAGACTTCTGAT 281277 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || || |||||||||||||| || || ||||| || ||||| || Sbjct 281278 ACAATTGAGAATGTGAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCAGACCAACAG 281337 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || || || | || ||||| | || | || ||||| ||| | Sbjct 281338 AGGCTCATCTTTGCAGGGAAGCAATTGGAGGATGGTCGAACCTTGGCTGATTACAACATT 281397 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| || || ||||||||| Sbjct 281398 CAGAAGGAATCTACCCTCCATCTTGTT 281424 >seq1558 Length=1070493 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || ||||| || ||||| ||||| ||| ||||||| Sbjct 239155 CAGATATTCGTGAAAACCCTAACTGGGAAAACAATAACCCTAGAGGTTGAATCCTCAGAC 239214 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| || ||||| ||||| |||||||| |||||||| Sbjct 239215 ACCATCGACAATGTGAAGACTAAGATCCAAGACAAGGAAGGCATCCCTCCAGACCAGCAG 239274 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||||||||| ||||| || | ||||| ||||| || ||| || Sbjct 239275 CGTCTCATCTTCGCCGGAAAACAGCTTGAAGACGGCCGCACTCTCGCCGACTACAACATC 239334 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 239335 CAGAAGGAGTCGACCCTTCACCTGGT 239360 >seq1925 Length=318408 Score = 159 bits (176), Expect = 8e-34 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || ||||| ||||| | ||||| || ||||||||| Sbjct 245616 CAAATTTTCGTCAAGACTTTGACTGGGAAAACTATCACTTTGGAGGTTGAGAGCTCAGAC 245675 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||||||||| || || || || || || || |||||| Sbjct 245676 ACCATCGACAATGTCAAGGCTAAGATTCAGGATAAGGAGGGCATTCCCCCAGATCAGCAA 245735 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || |||||||| ||||| ||||| ||||| || || ||| | Sbjct 245736 AGATTGATCTTTGCAGGGAAGCAGCTCGAGGATGGGAGGACCCTTGCAGACTACAACATT 245795 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || ||||| || |||| Sbjct 245796 CAAAAGGAGTCTACACTTCA-CTTG 245819 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || |||||||| || || |||||||| || || || ||| Sbjct 244704 CAAATCTTCGTTAAGACTCTTACCGGAAAAACCATAACTCTCGAGGTTGAGAGTTCTGAC 244763 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||| || || || ||||| || || |||||||| Sbjct 244764 ACCATCGACAATGTTAAGACGAAGATTCAAGATAAGGAGGGAATTCCCCCAGACCAGCAG 244823 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || ||||| ||||| || ||||| | || || || || || || || Sbjct 244824 CGTCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGCCGAACGCTCGCTGACTACAATATC 244883 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || || |||||| Sbjct 244884 CAGAAGGAGTCGACCCTCCACCTTGTT 244910 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || |||||||| ||||| |||||||| || Sbjct 245160 CAGATCTTTGTTAAGACCCTCACTGGGAAGACTATCACCCTTGAGGTTGAAAGCTCTGAT 245219 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || || || ||||| ||||| || || || || ||||| Sbjct 245220 ACAATTGACAATGTTAAAACCAAAATCCAAGACAAGGAAGGTATTCCCCCAGATCAGCAG 245279 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| |||||||||||||| || ||||| | |||||||| ||||| ||| || Sbjct 245280 AGGTTGATCTTTGCCGGAAAACAGCTTGAGGATGGCCGCACTCTTGCTGATTACAACATC 245339 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || ||||| || || || || || ||| Sbjct 245340 CAGAAAGAGTCGACCCTCCACCTGGTT 245366 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || ||||| |||||| | ||||| || ||||||||| Sbjct 245844 CAAATATTTGTTAAGACCTTGACTGGGAAAACCATCACCTTGGAGGTCGAGAGCTCAGAC 245903 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| |||||||| ||||| |||||||| Sbjct 245904 ACTATCGATAATGTCAAGACTAAGATACAGGACAAGGAAGGAATTCCTCCTGACCAGCAG 245963 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || || ||| | || || || | ||| | || || || ||| | Sbjct 245964 AGGTTGATTTTTGCTGGTAAGCAGTTGGAGGACGGGCGCACTTTGGCAGACTACAACATT 246023 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 246024 CAGAAGGAATCCACCCTTCACCTTGT 246049 >seq2448 Length=870776 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || ||||| || ||| | || || ||| || ||| Sbjct 350298 CAGATTTTCGTGAAAACCCTAACTGGTAAAACCATAACCTTAGATGTCGAATCATCCGAC 350357 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| ||||| || ||||||||||| ||||| || || || ||| Sbjct 350358 ACAATCGACAATGTCAAAATCAAGATCCAAGACAAAGAAGGCATCCCACCAGATCAACAA 350417 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||| | ||||||||||| || ||||| ||||| ||| | Sbjct 350418 CGCTTAATCTTTGCTGGGAAACAATTGGAAGATGGAAGAACACTTGCAGATTACAACATT 350477 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 350478 CAGAAGGAATCCACGCTTCAT 350498 >seq2770 Length=737149 Score = 132 bits (146), Expect = 1e-25 Identities = 141/185 (76%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | ||||| || || || || | ||||| || ||||||||| Sbjct 636292 CAAATTTTTGTTAAGACT-TGACAGGGAAGACTATAACTTTGGAGGTTGAGAGCTCAGAC 636234 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||||||||||| || ||||| || || | |||||||||| Sbjct 636233 ACGATTGATAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCCCTGGACCAGCAA 636174 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || || ||||| || ||||| ||||| ||||| ||||| || || Sbjct 636173 AGGTTGATATTTGCTGGGAAGCAGCTTGATGATGGGAGGACCCTTGCGGATTACAATATC 636114 Query 178104 CAAAA 178108 ||||| Sbjct 636113 CAAAA 636109 Score = 129 bits (142), Expect = 1e-24 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 177911 GGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGT 177970 |||| | ||| | |||||||| || ||||| || || || ||| | || || |||||||| Sbjct 636733 GGTTTAGATGATGCAAATTTTTGTCAAAACCCTAACTGGCAAATCCATGACTCTCGAGGT 636674 Query 177971 GGAAAGCTCAGACACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCC 178029 || || || || || || || || || || || ||| ||||| || ||||| || || | Sbjct 636673 CGAGAGTTCTGATACAATTGATAATGTTAAGACCAAA-ATTCAAGATAAAGAGGGGATTC 636615 Query 178030 CTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG 178089 | || || ||||| || || |||||||| ||||||||||| || |||| | || |||| Sbjct 636614 CCCCAGATCAGCAGCGTCTGATCTTCGCTGGAAAACAGCTTGAGAATGGCCGAACCCTTG 636555 Query 178090 CCGATTATAACGTCCAAAAAGAATC 178114 | ||||||| | |||| || || || Sbjct 636554 CGGATTATAGCATCCAGAAGGAGTC 636530 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995 || ||| | || || || || |||||||| ||||| | |||||||| || |||| || Sbjct 636078 AAGACTTTGACTGGGAAGACCATCACCCTGGAGGTTTAGAGCTCAGATACTGTCGATAAT 636019 Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 || ||| || || ||||||||||| || || | ||||||||||| || | |||||| Sbjct 636018 GTGAAAACTAAAATCCAGGACAAAGAGGGGATTTCCCCGGACCAGCAGAGATTAATCTTC 635959 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 ||||| || || || || |||||| | || | || || || || | || ||| |||| Sbjct 635958 GCCGGGAAGCAACTTGAGGATGGACGCACCTTGGCTGACTACAATATTCAGAAAAAATCC 635899 Query 178116 ACACTGCATCTTGT 178129 || || || ||||| Sbjct 635898 ACCCTCCACCTTGT 635885 >seq2371 Length=888473 Score = 118 bits (130), Expect = 3e-21 Identities = 145/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| || ||||||||||| || || ||||| |||||||| ||||| ||| Sbjct 99483 AAAATGC---AAATATTTGTGAAAACTCTTACGGGTAAAACCATCACCCTTGAGGTTGAA 99539 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 | || ||||| | |||||||| || || || ||||||||||| || | || Sbjct 99540 ACTAGTGATACCATTAACAACGTCAAGGCTAAAATCCATGACAAAGAAGGCATTCAACCC 99599 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || | || || |||||||||| ||| ||||| ||||| | | ||||| | |||| Sbjct 99600 GATCAACTGCGTCTCATCTTCGCCGAAAAGCAGCTTGAAGACGACCGTACTCTAG-CGAT 99658 Query 178095 TATAACGTCCAAAAAG 178110 || ||| |||| |||| Sbjct 99659 TACAACATCCAGAAAG 99674 Score = 89.7 bits (98), Expect = 1e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 |||||||||||| ||||||||||| | |||||||| || || ||||| |||||||| | Sbjct 62992 AGGAATCCCTCCAGACCAGCAACGTTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGCCG 63051 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACA 178118 |||||||| || || ||| |||| |||| ||||| Sbjct 63052 CACTCTTGCTGACTACAACATCCAGAAAGGTGCAACA 63088 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 3/123 (2%) Strand=Plus/Plus Query 177909 AAGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAG 177968 ||| || ||| | | || || ||||||||||| || || || || || |||||||| ||| Sbjct 62757 AAGCTTGAAA-GATGCAGATCTTCGTGAAAACCCTAACTGGTAAGACCATCACCCTTGAG 62815 Query 177969 GTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATC 178028 || |||||| || |||||||| || ||||| ||||| || ||||||||||| || Sbjct 62816 GTCGAAAGCAGTGATACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGG--TC 62873 Query 178029 CCT 178031 ||| Sbjct 62874 CCT 62876 >seq2382 Length=885673 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/110 (77%), Gaps = 3/110 (3%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| || | |||||||||||||| || || || || ||||| |||||||| ||| Sbjct 228816 AAAATGC---AAGTCTTCGTGAAAACTCTTACCGGCAAGACCATCACTCTCGAGGTCGAA 228872 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||| ||||||||| | || || || || ||||| ||||||||||| Sbjct 228873 AGCAGCGACACCATCAACAATGTTAAGGCCAAAATTCAAGACAAAGAAGG 228922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203684731085522