Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11] 3,486 sequences; 1,333,398,936 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3251 120 3e-22 seq2417 111 2e-19 seq607 107 2e-18 seq374 104 3e-17 seq2 104 3e-17 seq863 102 9e-17 seq530 102 9e-17 seq1776 100 3e-16 seq993 91.5 2e-13 >seq3251 Length=7052893 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| ||||| ||||| | | ||||| | ||||||||||||||| Sbjct 3481202 CTCCTTTTGGATGTTGTAGTCAGCTAGAGTTCTGCCATCATCCAACTGCTTACCAGCGAA 3481261 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 ||||| | ||||||||| | || | | |||||| ||| ||| |||| || |||| Sbjct 3481262 GATGAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTATCC-TGAATTTTGGTCTTGACAT 3481320 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | || || | ||||| |||| |||||||| ||||| || || || || | Sbjct 3481321 TCTCAATAGTATCAGAAGTCTCCACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCA 3481380 Query 43171 CAAAGATTTGCAT 43183 ||||||||||||| Sbjct 3481381 CAAAGATTTGCAT 3481393 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || || || | ||||| ||||| || ||||| |||||||||||||||||| Sbjct 3480711 CCTCCCCTCAACCGAAGCACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAATCAGCC 3480770 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | |||| | ||||| | |||||| || || || || || | ||||||||| | || Sbjct 3480771 AATGTCCTTCCATCATCCAACTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGTGGA 3480830 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTC---GCTCGATTC 43132 | | |||||||||| ||| | ||||| | | || | | | ||||| ||| ||| Sbjct 3480831 ATTCCCTCCTTGTCC-TGAATCTTTGTCTTAACGTTATCGATAGTGTCAGAGCT---TTC 3480886 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||||||||| || || || ||||| || || || ||||| Sbjct 3480887 AACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 3480937 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||||||||||| || || | || || | ||||| ||||| || Sbjct 3480290 CTCCTTTTGAATGTTGTAATCAGCCAAGGTTCGACCATCCTCCAATTGCTTCCCAGCAAA 3480349 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 ||||| | ||||||||| | || | | |||||||||| ||| | || || || | Sbjct 3480350 GATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCC-TGAATCTTAGTCTTCACAT 3480408 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | || || | || || |||| ||||| || || || || || ||||| | Sbjct 3480409 TCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTCTTCCCGGTGAGGGTCTTCA 3480468 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 3480469 CAAAGATCTGCAT 3480481 >seq2417 Length=2538752 Score = 111 bits (122), Expect = 2e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||||||||| | ||| | ||| | || |||||| ||||| ||||||||||| Sbjct 2310188 TCCACCTCTTAAACGGAGCACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGC 2310129 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || ||| | || || |||||||| ||||| || || |||| ||| ||||| | || Sbjct 2310128 AAGGGTACGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCTGGGGG 2310069 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 43131 | || ||||||| | ||| |||| | ||||| | | | ||||| ||| || Sbjct 2310068 AATGCCTTCCTTGT-CTTGAATTTTGGTTTTGACATTGTCAATGGTGTCAGAGCT---TT 2310013 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | ||||| || || || || || ||||| ||||| || ||||| Sbjct 2310012 CAACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTCACAAAAATCTGCAT 2309961 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||||||||| | |||||| || | ||| ||||||||| || ||||| || || Sbjct 2310416 TCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCTGC 2310357 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||| | | || || |||||||| || || || || | || ||||| || | || Sbjct 2310356 AAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATCAATCTTTGCTGATCTGGGGG 2310297 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 43131 | || |||||| ||| ||| | || | |||| | | | ||||| |||| | Sbjct 2310296 AATGCCCTCCTTATCC-TGAATCTTAGCCTTGACATTGTCGATGGTGTCTGAGCTC---T 2310241 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || || | ||||| ||||| || || | ||||| || || ||||||||| Sbjct 2310240 CAACCTCCAAAGTGATAGTTTTCCCAGTCAAAGTCTTGACGAAAATTTGCATT 2310188 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||||||||| ||||| || | || || || ||||| ||||| || Sbjct 2309696 CTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCTTCAAGTTGCTTTCCAGCAAA 2309637 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | || ||||||||| | || | || ||||||| | ||| |||| | ||||| Sbjct 2309636 GATCAATCTCTGCTGGTCTGGGGGAATGCCTTCCTTGT-CTTGAATTTTGGTTTTGACAT 2309578 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| || || | |||||||| || || || || ||||| | Sbjct 2309577 TGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTAA 2309518 Query 43171 CAAAGATTTGCAT 43183 |||| || ||||| Sbjct 2309517 CAAAAATCTGCAT 2309505 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| ||||| || || || | || || |||||||| ||||| || Sbjct 2308784 CTCCTTCTGGATATTGTAGTCAGCGAGCGTTCGGCCATCCTCCAGCTGCTTTCCAGCAAA 2308725 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | | |||||| | | ||| | || || | | | | Sbjct 2308724 GATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTAT-CTTGAATCTTCGTCTTAACAT 2308666 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| ||| || || |||| || |||||||| || || || |||| Sbjct 2308665 TGTCGATGGTGTCAGAACTC---TCAACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTCT 2308609 Query 43168 TTACAAAGATTTGCAT 43183 | || ||||||||||| Sbjct 2308608 TAACGAAGATTTGCAT 2308593 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||| ||||| || |||| ||| ||| |||| || | |||||||||||| || Sbjct 2310607 TCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCGTCCTCCAACTGCTTACCAGCAAAA 2310548 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 || | | ||||||||| | || | | ||||||||| || | || || |||| | Sbjct 2310547 ATCAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC-TGTATCTTAGTCTTGACATT 2310489 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| || || || | ||||||||||| || || | ||||| Sbjct 2310488 ATCGATAGTGTCTGAGCTC---TCGACCTCCAAGGTGATGGTTTTCCCAGTCAAGGTCTT 2310432 Query 43169 TACAAAGATTTGCATT 43184 ||||| ||||||||| Sbjct 2310431 AACAAATATTTGCATT 2310416 >seq607 Length=2562756 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| ||||| ||||| | | ||||| | ||||||||||||||| Sbjct 507213 CTCCTTTTGGATGTTGTAGTCAGCTAGAGTTCTGCCATCATCCAACTGCTTACCAGCGAA 507154 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 ||||| | ||||||||| | || | | |||||| | | ||| |||| || |||| Sbjct 507153 GATGAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTAT-CTTGAATTTTGGTCTTGACAT 507095 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | ||||| | || || |||| || ||||| || || || || || || | Sbjct 507094 TCTCAATAGTGTCAGAAGTCTCGACCTCGAGGGTTATGGTCTTCCCAGTCAGGGTTTTCA 507035 Query 43171 CAAAGATTTGCAT 43183 ||||||||||||| Sbjct 507034 CAAAGATTTGCAT 507022 Score = 104 bits (114), Expect = 3e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| || || | ||| | ||||| || ||||| || ||||||||||||||| Sbjct 507704 CCTCCTCTCAACCGGAGCACTAGGTGCAAAGTAGATTCCTTCTGGATATTGTAATCAGCC 507645 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | ||||| | |||||| || || || || || | ||||||||| | || Sbjct 507644 AATGTCCGGCCATCATCCAACTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGTGGG 507585 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTC---GCTCGATTC 43132 | | ||| |||||| ||| | ||||| | | || | | | ||||| ||| ||| Sbjct 507584 ATTCCCTCTTTGTCC-TGAATCTTTGTCTTAACGTTATCGATAGTGTCAGAGCT---TTC 507529 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||||||||| || || || ||||| || || || ||||| Sbjct 507528 AACTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 507478 >seq374 Length=4160932 Score = 104 bits (114), Expect = 3e-17 Identities = 158/221 (71%), Gaps = 8/221 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | |||| |||||| || || ||||| ||||| || || ||| | Sbjct 3965730 ACGGAGCACCAAATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGCCC 3965671 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| || | | ||||||||| | || | | |||||| Sbjct 3965670 ATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTT 3965611 Query 43088 GTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCGACCG 43143 ||| ||| | || | |||| | | | || ||| ||| || || |||| | Sbjct 3965610 GTCT-TGAATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTC---TCGACTTCGAGGG 3965555 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||||||| || || || || ||||| ||||||||||||||| Sbjct 3965554 TGATGGTCTTCCCAGTGAGAGTCTTGACAAAGATTTGCATT 3965514 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || ||||| | ||||||||| | ||| |||||| || || ||||| || ||| Sbjct 3965969 CCTCCCCTCAAACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 3965910 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| || | || || ||||||||||||||||| || | | ||||||||| | || Sbjct 3965909 AAAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGG 3965850 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| | || || | | | | | | | ||||| |||| || Sbjct 3965849 ATACCTTCCTTGTCC-TGAATCTTGGTCTTAACATTGTCAATGGTGTCGGAGCTC---TC 3965794 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || ||||| || || || || ||||| || || || ||||| Sbjct 3965793 AACCTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTTCACGAAAATCTGCAT 3965743 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | ||| | ||| | || | || |||||||||||| ||||| ||||| Sbjct 3965286 TCCTCCCCTGAGACGGAGCACAAGGTGGAGAGTTGACTCCTTTTGAATGTTGTAGTCAGC 3965227 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| || ||||| || || ||||| || || | |||||||| | || Sbjct 3965226 TAGGGTTCGGCCGTCCTCCAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGG 3965167 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTC 43132 | | |||||||| ||| || |||| | | | |||||| ||| || Sbjct 3965166 AATTCCTTCCTTGTCTTGGATCTTAGTCTTGACATTGTCAATGGTGTCGGAACTC---TC 3965110 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| |||||||| || || || || ||||| || ||||||||||| Sbjct 3965109 GACCTCGAGAGTGATGGTCTTTCCAGTAAGGGTCTTCACGAAGATTTGCAT 3965059 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/196 (70%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| || || ||| | || || |||||||||||||| || Sbjct 3966390 CTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCGAGCTGCTTACCAGCAAA 3966331 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | | |||||||||| ||| || || | | Sbjct 3966330 GATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTAGCCTTCACATT 3966271 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | || || |||| || || || | |||||||| ||||| || | ||||| Sbjct 3966270 ATCAATTGTATCCGAGCTC---TCAACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTT 3966214 Query 43169 TACAAAGATTTGCATT 43184 ||||| || |||||| Sbjct 3966213 CACAAAAATCTGCATT 3966198 >seq2 Length=8241039 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 42994 CCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || |||||||| || ||||| || ||||| || |||||||| || ||||| Sbjct 3865210 CCTTTCTGGATGTTGTAATCGGCAAGAGTACGGTCGTCTTCAAGCTGCTTTCCGGCGAAG 3865269 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 |||| ||||| || |||| | | || || ||||| |||||| |||| ||| Sbjct 3865270 ATGAAACGCTGTTGATCGGGTTGAATGCCTTCTTTGTCATGGATTTTAGCCTTGA-CGTT 3865328 Query 43113 GCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | | || || | ||| || || | ||||||||||| ||||| || || || || Sbjct 3865329 GTTAATGGTATCACTAGTTTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCAC 3865388 Query 43172 AAAGATTTGCATTTTT 43187 ||| |||||||||||| Sbjct 3865389 AAATATTTGCATTTTT 3865404 >seq863 Length=2839217 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| || |||| |||||| || | || ||||||||| ||||||||||| || Sbjct 2112548 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCCGCA 2112489 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | | ||||| |||||||| || || || || | | |||||||| | || Sbjct 2112488 AGGGTCCTCCCATCATCAAGCTGCTTCCCGGCAAAGATCAACCTTTGCTGGTCCGGAGGA 2112429 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | || ||||| ||| ||| | || | ||||| | | | ||||| |||| || Sbjct 2112428 ATGCCTTCCTTATCC-TGAATCTTGGCTTTGACATTATCAATAGTGTCAGAGCTC---TC 2112373 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || | ||||| || || || || | ||||| ||||| ||||||||| Sbjct 2112372 AACCTCCAAAGTGATAGTCTTCCCTGTCAAAGTCTTAACAAAAATTTGCATT 2112321 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| ||||| || | ||| | ||| | || ||||| || |||||||||||||| Sbjct 2112092 CCTCCCCTTAATCGGAGCACAAGATGGAGGGTTGATTCCTTCTGGATATTGTAATCAGCA 2112033 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| ||| | || || |||||||| ||||| || || | | |||||| || | || Sbjct 2112032 AGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGG 2111973 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | |||||||| | ||| |||| || | | | | | | | ||||| |||| || Sbjct 2111972 ATTCCCTCCTTGT-CTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGGAGCTC---TC 2111917 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| || || || | ||||| ||||| |||||||| Sbjct 2111916 AACCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 2111866 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||||||||| | |||||| || | || ||||||||| ||||||||||| || Sbjct 2112776 CCACCTCTTAAACGGAGCACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCTGCA 2112717 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || |||| | | || || |||||||| |||||||| || | | |||||| || | || Sbjct 2112716 AGGGTCCTCCCATCCTCAAGCTGCTTCCCAGCGAAAATCAACCTCTGCTGATCAGGGGGA 2112657 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | || ||||| ||| ||| || || | | | || ||||| |||| || Sbjct 2112656 ATGCCTTCCTTATCCTGGATCTTAGTCTTTACATTATCAACAGTGTCTGAGCTC---TCA 2112600 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||| || || || | ||||| ||||| || ||||| Sbjct 2112599 ACCTCCAAAGTGATGGTCTTCCCTGTCAAGGTCTTAACAAAAATCTGCAT 2112550 Score = 93.3 bits (102), Expect = 5e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| |||||||| || | || | ||| | || |||||| || |||||||||||||| Sbjct 2112321 TCCACCTCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATATTGTAATCAGC 2112262 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| ||| | || || |||||||| ||||| || || | | |||||| || | || Sbjct 2112261 AAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGG 2112202 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | | |||||||| | ||| |||| || | | | | | | | ||||| |||| | Sbjct 2112201 GATTCCCTCCTTGT-CTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGGAGCTC---T 2112146 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | || || || || || |||| || || ||||| |||||||| Sbjct 2112145 CAACCTCCAAAGTAATAGTCTTCCCTGTTAAAGTTTTCACAAAAATTTGCAT 2112094 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||||||||| ||||| || | || || |||||||| ||||| || Sbjct 2111829 CTCCTTCTGGATGTTGTAATCAGCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAA 2111770 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | |||||| || | || | | || |||||| ||| | || || | | | | Sbjct 2111769 GATCAACCTCTGCTGATCCGGGGGGATTCCTTCTTTGTCC-TGAATCTTGGTCTTAACAT 2111711 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | || ||||| ||| ||| || || | || || ||||| || || | |||| Sbjct 2111710 TGTCGACAGTGTCAGAGCT---TTCAACCTCCAAGGTAATTGTTTTTCCTGTCAAAGTCT 2111654 Query 43168 TTACAAAGATTTGCATT 43184 ||||||||||||||||| Sbjct 2111653 TTACAAAGATTTGCATT 2111637 >seq530 Length=4616287 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || ||||| | ||||| ||| | ||| |||||| || || ||||| ||||| Sbjct 1166065 TCCTCCCCTCAAACGGAGCACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGC 1166124 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || ||| || | || || ||||||||||||||||| || | | ||||||||| | || Sbjct 1166125 CAAAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGG 1166184 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | | ||||||||| ||| | || || | | | | | | | ||||| |||| | Sbjct 1166185 GATACCTTCCTTGTCC-TGAATCTTGGTCTTAACATTGTCAATGGTGTCGGAGCTC---T 1166240 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | || ||||| || || || || ||||| || || || ||||| Sbjct 1166241 CAACCTCCAAAGTTATGGTCTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 1166292 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || || || | |||||| || | || ||||||||| ||||||||||| || Sbjct 1165837 TCCTCCCCTCAATCGGAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCCGC 1165896 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||||| | || || |||||||| || || || || | | ||||||||| | || Sbjct 1165897 AAGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGGGGG 1165956 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 43131 | || ||||||||| ||| | || | | | | | | | | ||||| |||| | Sbjct 1165957 GATGCCTTCCTTGTCC-TGAATCTTCGCCTTAACATTGTCGATGGTGTCCGAGCTC---T 1166012 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || |||| |||||||| || || || | ||||| || || || |||||| Sbjct 1166013 CAACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCATT 1166065 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/196 (70%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||| || || ||| | || || |||||||||||||| || Sbjct 1165645 CTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCGAGCTGCTTACCAGCAAA 1165704 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | | |||||||||| ||| || || | | Sbjct 1165705 GATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTAGCCTTCACATT 1165764 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| || || || | |||||||| ||||| || | || || Sbjct 1165765 ATCAATAGTGTCCGAGCTC---TCAACCTCCAAAGTGATGGTCTTGCCAGTCAAGGTTTT 1165821 Query 43169 TACAAAGATTTGCATT 43184 ||||| || |||||| Sbjct 1165822 CACAAAAATCTGCATT 1165837 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| || | ||| | ||| | || | ||| |||||| || || ||||||||||| Sbjct 1166749 TCCTCCCCTGAGACGGAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGC 1166808 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || |||| |||||||| || || ||||| || || | |||||||| | || Sbjct 1166809 TAGGGTTCGGCCGTCCTCTAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGG 1166868 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTC 43132 | | |||||||| ||| || |||| | | | |||||| ||| || Sbjct 1166869 AATCCCTTCCTTGTCTTGGATCTTAGTCTTGACATTGTCAATGGTGTCGGAACTC---TC 1166925 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| ||||| || || || || || ||||| || ||||||||||| Sbjct 1166926 GACCTCGAGAGTGATAGTCTTTCCAGTAAGGGTCTTAACGAAGATTTGCAT 1166976 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/221 (70%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || |||||| || || ||||| || || ||||| ||| | Sbjct 1166305 ACGGAGCACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGCCC 1166364 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| || | | ||||||||| | || | | |||||| Sbjct 1166365 ATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTT 1166424 Query 43088 GTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCGACCG 43143 ||| ||| | || | |||| | | | || ||| ||| || || || | | Sbjct 1166425 GTCT-TGAATCTTAGCCTTGACATTATCAATGGTATCGGAGCTC---TCGACTTCAAGGG 1166480 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||||||| || || || || ||||| ||||||||||||||| Sbjct 1166481 TGATGGTCTTCCCTGTGAGAGTCTTCACAAAGATTTGCATT 1166521 >seq1776 Length=5111350 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| | ||||||||| | || | ||| | || |||||| ||||| ||||||||||| Sbjct 1205089 TCCACTTCTTAAACGGAGTACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGC 1205030 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || ||| | || || |||||||| ||||| || || |||| ||| ||||| | || Sbjct 1205029 AAGGGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCAGGGGG 1204970 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | || ||||| | | ||| |||| | ||||| | | | |||||| ||| | Sbjct 1204969 AATGCCTTCCTTAT-CTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAACTTTCAA 1204911 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || || || || || ||||| |||||||| ||||| Sbjct 1204910 TCTCAAGGGTGATAGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 1204862 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||||||||| | |||||| || | ||| ||||||||| |||||||| ||||| Sbjct 1205317 TCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGC 1205258 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||| | | || || |||||||| || || || || | | ||||| || | || Sbjct 1205257 AAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTTTGCTGATCTGGGGG 1205198 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 43131 | || |||||| | | ||| | |||| |||| | | | ||||| ||| | Sbjct 1205197 AATGCCCTCCTTAT-CTTGAATCTTTGCCTTGACATTGTCAATGGTGTCTGAACTC---T 1205142 Query 43132 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || || | ||||| || || || || | ||||| || || ||||||||| Sbjct 1205141 CGACCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAATATTTGCATT 1205089 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || ||||||||||| ||||| || || | | || || |||||||| ||||| || Sbjct 1204368 TCTTTCTGAATATTGTAGTCAGCGAGTGTTCTGCCATCCTCCAGCTGCTTTCCAGCAAAG 1204309 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | | |||||| | | ||| | || || | | | | Sbjct 1204308 ATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTAT-CTTGAATCTTCGTCTTAACATT 1204250 Query 43113 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | | ||||| ||| || || |||| || ||||||||||| || || ||||| Sbjct 1204249 GTCGATTGTGTCAGAACTC---TCAACCTCGAGAGTTATGGTTTTGCCGGTAAGAGTCTT 1204193 Query 43169 TACAAAGATTTGCAT 43183 |||||||||||||| Sbjct 1204192 AACAAAGATTTGCAT 1204178 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||||| ||| | |||| || | || |||||| || || ||||||||||| Sbjct 1204860 CCACCTCTTAGACGGAGAACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 1204801 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || ||||| || || || || || | | ||||||||| | || Sbjct 1204800 AGAGTGCGGCCATCCTCAAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 1204741 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||||| |||||| ||| | | | | ||||| ||| ||| Sbjct 1204740 ATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTATCAATAGTGTCAGAGCT---TTCA 1204684 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| || || || || || |||||||||||||| ||||| Sbjct 1204683 ACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTTACAAAGATCTGCAT 1204634 >seq993 Length=2602326 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || ||||| |||| || ||||| || || ||||| Sbjct 374611 CTCCTTCTGGATGTTGTAGTCGGCGAGTGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAA 374552 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||| || ||||||||||| | || | || |||||||| ||| || || | | Sbjct 374551 TATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATT 374492 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||||| || || | || |||||||| || ||||| || || || Sbjct 374491 GTCGATCGTGTCTGAGGATTCAACCTCTAGGGTTATGGTTTTCCCGGTTAGGGTTTTCAC 374432 Query 43172 AAAGATTTGCATTTT 43186 || || ||||| || Sbjct 374431 GAATATCTGCATCTT 374417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571792683048080