Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11] 3,486 sequences; 1,333,398,936 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1717 87.8 2e-12 >seq1717 Length=9716283 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 ||||||||| || || ||||| || || ||||||||||| | | ||| | |||||| Sbjct 1668537 CACCAAATGAAGCGTCGATTCCTTCTGAATGTTGTAATCTGCAAGTGTTCTTCCATCTTC 1668596 Query 20059 CAATTGTTTGCCCGCATA-AATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117 ||||||||| || ||| | | ||||| | |||||||| || | |||||||||||| Sbjct 1668597 CAATTGTTTCCCAGCAAAGATTAAGCGT-TGTTGATCTGGTGGGATGCCTTCTTTGTCTT 1668655 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 || || ||| || | | | | | ||| | ||| || | ||| ||||||| Sbjct 1668656 GGATCTTGATTTTGACATTGTCGATTGTGTCGGATGATTCGACCTCTAAGGTTATGGTTT 1668715 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCATTTTT 20212 | || || | ||||| || ||||| ||||| ||| Sbjct 1668716 TTCCAGTTAGGGTTTTCACGAAAATCTGCATATTT 1668750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419569373575566