Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11] 3,486 sequences; 1,333,398,936 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq863 134 3e-26 seq2390 132 1e-25 seq1009 132 1e-25 seq993 132 1e-25 seq374 118 3e-21 seq530 109 1e-18 seq2417 105 2e-17 seq607 105 2e-17 seq3251 102 2e-16 seq1776 100 7e-16 >seq863 Length=2839217 Score = 134 bits (148), Expect = 3e-26 Identities = 171/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | ||| |||||| || ||||| ||||| || Sbjct 2113004 CCACCACGGAGACGAAGGACAAGGTGGAGGGTGGATTCTTTCTGAATATTGTAGTCAGCC 2112945 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||||| || || | ||| || ||||| ||||| || | ||| || || ||| Sbjct 2112944 AAGGTGCGTCCATCCTCGAGTTGCTTCCCTGCAAAGATTAGTCTCTGCTGG---TCCGGG 2112888 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || |||||||||||||| | |||||| || || | || ||| |||| Sbjct 2112887 GGAATCCCCTCCTTATCCTGGATTTTAGTTTTCACATTATCAACAGTATCTGAGCTC--- 2112831 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| |||||||| |||| ||||||||| || |||||||| Sbjct 2112830 TCAACCTCTAGGGTGATGGTCTTCCCAGTCAAAGTCTTGACAAAAATCTGCAT 2112778 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/197 (71%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| || || || || || || || | | ||| || || ||| Sbjct 2111600 TCCTTCTGGATGTTATAGTCTGCAAGGGTTCGGCCATCCTCGAGCTATTTACCAGCAAAG 2111541 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| ||| |||||| |||||||||||||| || ||||| | || || Sbjct 2111540 ATCAGACGCTGCTGA---TCTGGGGGAATTCCTTCTTTATCTTGAATTTTGGTCTTAACA 2111484 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || || || || || || | ||| || || || || Sbjct 2111483 TTATCAATCGTATCAGAACTC---TCGACCTCAAGAGTTATGGACTTGCCAGTTAGGGTT 2111427 Query 288457 TTGACGAATATCTGCAT 288473 ||||| || || ||||| Sbjct 2111426 TTGACAAAAATTTGCAT 2111410 >seq2390 Length=8026821 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || |||| || ||| || ||||| || |||||||| Sbjct 2842997 CCACCACGAAGACGAAGAACAAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCT 2843056 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || ||||| | |||||||| ||||| || ||||| ||||| |||| Sbjct 2843057 AAAGTGCGGCCATCTTCGAGCTGTTTTCCGGCGAAAATGAGACGTTGTTGGTCTGGTGGG 2843116 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||||||| || ||||| || ||||| || || || || | || |||||||| Sbjct 2843117 ATTCCTTCTTTGTCTTGGATCTTGGCTTTGACATTGTCGATTGTGTCCGAGGATTCTACC 2843176 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || || || || || || || ||||| ||||||||| Sbjct 2843177 TCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATT 2843224 >seq1009 Length=6422589 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || || |||| || || || ||||| || ||||||||| Sbjct 510244 CCACCCCTGAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 510185 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || ||||| |||||||| | |||||||| |||||||| |||||||| || ||||| Sbjct 510184 AGAGTGCGGCCGTCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGG---TCTGGA 510128 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| ||||| || || ||||| || | ||||| || || || | || ||||| Sbjct 510127 GGGATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCA 510068 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || || || || |||||||||||||| Sbjct 510067 ACCTCTAGGGTTATTGTTTTCCCAGTTAGGGTTTTCACGAATATCTGCAT 510018 >seq993 Length=2602326 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | ||| || || |||| || || || ||||| || ||||||||| Sbjct 374646 CCACCCCTGAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 374587 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | |||||||| ||||| ||||||||||| || |||||| Sbjct 374586 AGTGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAATATCAGACGCTGCTGG---TCTGGG 374530 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || || ||||| || | ||||| || || || | || ||||| Sbjct 374529 GGAATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATCGTGTCTGAGGATTCA 374470 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || |||||||| || || || |||||||||||||| Sbjct 374469 ACCTCTAGGGTTATGGTTTTCCCGGTTAGGGTTTTCACGAATATCTGCAT 374420 >seq374 Length=4160932 Score = 118 bits (130), Expect = 3e-21 Identities = 168/234 (72%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | ||||| ||| || || ||||| || ||||| || Sbjct 3965741 CCACCACGAAGACGGAGCACCAAATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCA 3965682 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || ||||| |||||||||| | ||| || |||||| Sbjct 3965681 AGGGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGG---TCTGGG 3965625 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 || || || || || || || || || || || || || |||| |||| ||| Sbjct 3965624 GGAATACCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTC--- 3965568 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || |||||||| ||||| |||||||| || ||||||||||| || || |||||| Sbjct 3965567 TCGACTTCGAGGGTGATGGTCTTCCCAGTGAGAGTCTTGACAAAGATTTGCATT 3965514 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||||||||| || || || || || | || ||||| |||||| Sbjct 3965477 TCCTTTTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCGAAG 3965418 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | || || |||||| ||||| || || || || ||||| || || ||| Sbjct 3965417 ATCAGCCTTTGCTG---GTCTGGGGGAATTCCCTCCTTGTCTTGAATTTTGGCCTTGACG 3965361 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| |||||||| ||||| ||||| || || || || ||| Sbjct 3965360 TTGTCAATGGTGTCGGAGCTTTCGACTTCGAGGGTGATTGTCTTTCCTGTTAGGGTTTTG 3965301 Query 288460 ACGAATATCTGCATT 288474 || || ||||||||| Sbjct 3965300 ACAAAGATCTGCATT 3965286 Score = 96.9 bits (106), Expect = 8e-15 Identities = 141/197 (72%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| || || || || ||||| || | |||||||| |||||| Sbjct 3965249 TCCTTTTGAATGTTGTAGTCAGCTAGGGTTCGGCCGTCCTCCAGCTGTTTTCCGGCGAAG 3965190 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | || || |||||| |||||||| || || ||||| || | || || Sbjct 3965189 ATCAGCCTTTGCTG---GTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTAGTCTTGACA 3965133 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || || ||||| ||||| ||||| || || || ||| Sbjct 3965132 TTGTCAATGGTGTCGGAACTC---TCGACCTCGAGAGTGATGGTCTTTCCAGTAAGGGTC 3965076 Query 288457 TTGACGAATATCTGCAT 288473 || ||||| || ||||| Sbjct 3965075 TTCACGAAGATTTGCAT 3965059 >seq530 Length=4616287 Score = 109 bits (120), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||||||| || || || || || | || ||||| |||||| Sbjct 1166558 TCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCGAGCTGCTTTCCGGCGAAG 1166617 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | || || |||||| |||||||| || || || ||||| || || ||| Sbjct 1166618 ATCAGCCTTTGCTGG---TCTGGGGGGATTCCTTCCTTGTCTTGAATTTTGGCCTTGACG 1166674 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| |||||||| ||||| ||||| || || | || ||| Sbjct 1166675 TTGTCAATGGTGTCGGAGCTTTCGACTTCGAGGGTGATTGTCTTTCCTGTTAAGGTTTTG 1166734 Query 288460 ACGAATATCTGCATT 288474 || || ||||||||| Sbjct 1166735 ACAAAAATCTGCATT 1166749 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||||||||| || || || || || | ||| || || | || || || || || Sbjct 1165874 TCCTTTTGGATATTGTAATCCGCAAGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAA 1165933 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| || |||||| || ||||| || ||||| || ||||| || || Sbjct 1165934 ATCAACCTCTGCTGG---TCTGGGGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTAACA 1165990 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || ||||| ||||| ||||| ||||||| ||| Sbjct 1165991 TTGTCGATGGTGTCCGAGCTC---TCAACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTC 1166047 Query 288457 TTGACGAATATCTGCATT 288474 |||||||| ||||||||| Sbjct 1166048 TTGACGAAAATCTGCATT 1166065 Score = 95.1 bits (104), Expect = 3e-14 Identities = 163/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || | ||| | || || || |||| ||| || || ||||| || || || || Sbjct 1166749 TCCTCCCCTGAGACGGAGCACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGC 1166808 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || ||||| |||| |||||||| ||||||||||| | || || ||||| Sbjct 1166809 TAGGGTTCGGCCGTCCTCTAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTG---GTCTGG 1166865 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGA 288419 | || ||||| || || ||||| || | || || || || || | ||| ||| Sbjct 1166866 GGGAATCCCTTCCTTGTCTTGGATCTTAGTCTTGACATTGTCAATGGTGTCGGAACTC-- 1166923 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 1166924 -TCGACCTCGAGAGTGATAGTCTTTCCAGTAAGGGTCTTAACGAAGATTTGCAT 1166976 >seq2417 Length=2538752 Score = 105 bits (116), Expect = 2e-17 Identities = 143/197 (73%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| ||||| |||||||| || || || || | || ||||| || ||| Sbjct 2308783 TCCTTCTGGATATTGTAGTCAGCGAGCGTTCGGCCATCCTCCAGCTGCTTTCCAGCAAAG 2308724 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||||| ||||| || ||||| || || |||| || || Sbjct 2308723 ATCAGACGCTGCTG---GTCTGGGGGAATTCCCTCCTTATCTTGAATCTTCGTCTTAACA 2308667 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || ||| || || ||||| || || || || ||||| |||||| Sbjct 2308666 TTGTCGATGGTGTCAGAACTC---TCAACCTCGAGAGTTATGGTTTTTCCGGTAAGAGTC 2308610 Query 288457 TTGACGAATATCTGCAT 288473 || ||||| || ||||| Sbjct 2308609 TTAACGAAGATTTGCAT 2308593 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 12/198 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| || || || | || || || | || || ||||| ||| Sbjct 2310379 TCCTTTTGGATGTTGTAGTCTGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAG 2310320 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | || ||| |||||| || || || |||||||| || || || || || Sbjct 2310319 ATCAATCTTTGCTGA---TCTGGGGGAATGCCCTCCTTATCCTGAATCTTAGCCTTGACA 2310263 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || || | ||||| || ||||| |||| |||| Sbjct 2310262 TTGTCGATGGTGTCTGAGCTC---TCAACCTCCAAAGTGATAGTTTTCCCAGTCAAAGTC 2310206 Query 288457 TTGACGAATATCTGCATT 288474 |||||||| || |||||| Sbjct 2310205 TTGACGAAAATTTGCATT 2310188 >seq607 Length=2562756 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| || || || || || || || | || || |||||||| Sbjct 507440 TCCTTCTGAATGTTATAGTCTGCAAGAGTCCGACCATCCTCAAGCTGCTTCCCTGCGAAA 507381 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || |||||| |||||||||||||| || || | ||||| || Sbjct 507380 ATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCTTTATCCTGTATCTTTGTCTTCACATTC 507321 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | ||| ||||| | || |||||||| || || ||||||||||| Sbjct 507320 TCAATGGTGTCGGAAGTTTCAACTTCCAAGGTAATCGTCTTGCCTGTAAGAGTCTTGACA 507261 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 507260 AAGATCTGCAT 507250 >seq3251 Length=7052893 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| || || || || || || || | || || || || || Sbjct 3480975 TCCTTCTGAATGTTATAGTCTGCAAGAGTCCGGCCATCCTCAAGCTGCTTCCCAGCAAAA 3481034 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || |||||| ||||||||||||||||| |||| ||||| || Sbjct 3481035 ATAAGCCTCTGCTGGTCCGGTGGGATCCCTTCTTTATCCTGGATCTTCGTCTTCACATTC 3481094 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | ||| ||||| | ||||||||||| || || || |||||||| Sbjct 3481095 TCAATGGTGTCAGAAGTTTCGACTTCCAAGGTGATCGTCTTGCCTGTTAGGGTCTTGACA 3481154 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 3481155 AAGATCTGCAT 3481165 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || || || || | || || || || || ||||| || || || ||| Sbjct 3480291 TCCTTTTGAATGTTGTAATCAGCCAAGGTTCGACCATCCTCCAATTGCTTCCCAGCAAAG 3480350 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| || |||||| || || || || ||||| || || | ||||| Sbjct 3480351 ATGAGCCTCTGCTGG---TCTGGGGGGATACCCTCCTTGTCCTGAATCTTAGTCTTCACA 3480407 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| | || || ||||| ||||| ||||||||||| || ||||| Sbjct 3480408 TTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTCTTCCCGGTGAGGGTCTTC 3480467 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 3480468 ACAAAGATCTGCAT 3480481 >seq1776 Length=5111350 Score = 100 bits (110), Expect = 7e-16 Identities = 142/197 (72%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || || || ||||| || ||||| | || ||||| || ||| Sbjct 1204596 TCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAG 1204537 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| || |||||| || |||||||| || || ||||| | ||| || Sbjct 1204536 ATCAACCTCTGCTGG---TCTGGGGGAATACCTTCTTTGTCTTGAATTTTTGTTTTGACA 1204480 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || |||| || ||| || ||||| || ||||| ||||||||||| || ||| Sbjct 1204479 TTATCAATAGTGTCAGAACTC---TCAACTTCAAGGGTGATAGTCTTCCCGGTGAGGGTC 1204423 Query 288457 TTGACGAATATCTGCAT 288473 || || || |||||||| Sbjct 1204422 TTAACAAAAATCTGCAT 1204406 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 ||||| ||||| | || || || || || || || || || || ||||| || || Sbjct 1205073 AGTACAAGATGGAGGGTTGACTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGCCCATCC 1205014 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || ||||| || |||||||| | |||||| | || || ||||| ||||| Sbjct 1205013 TCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGGTCAGGGGGAATGCCTTCCTTATCT 1204954 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 || ||||| | ||| || || || || | ||| ||| | || || ||||| ||| Sbjct 1204953 TGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAACTTTCAATCTCAAGGGTGATAGTC 1204894 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || ||||| || || |||||||| Sbjct 1204893 TTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 1204862 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/197 (72%), Gaps = 10/197 (5%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||||||||| ||||| || || || | || || || | || || ||||| ||| Sbjct 1205280 TCCTTTTGGATATTGTAGTCAGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAG 1205221 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | || ||| |||||| || || || ||||| || || || || || || Sbjct 1205220 ATCAACCTTTGCTGA---TCTGGGGGAATGCCCTCCTTATCTTGAATCTTTGCCTTGACA 1205164 Query 288400 TTTTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCT 288457 || || || | || | | ||| || || | |||||||||||||| |||| ||||| Sbjct 1205163 TTGTCAATGGTGTC--TGAACTCTCGACCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCT 1205106 Query 288458 TGACGAATATCTGCATT 288474 |||||||||| |||||| Sbjct 1205105 TGACGAATATTTGCATT 1205089 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 12/198 (6%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || ||||| ||||| ||||| || | || || || | || ||||| || || Sbjct 1204369 TTCTTTCTGAATATTGTAGTCAGCGAGTGTTCTGCCATCCTCCAGCTGCTTTCCAGCAAA 1204310 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||||||||||| || |||||| ||||| || ||||| || || |||| || || Sbjct 1204309 GATCAGACGCTGCTG---GTCTGGGGGAATTCCCTCCTTATCTTGAATCTTCGTCTTAAC 1204253 Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 || || || | || ||| || || ||||| || || || || ||||| ||||| Sbjct 1204252 ATTGTCGATTGTGTCAGAACTC---TCAACCTCGAGAGTTATGGTTTTGCCGGTAAGAGT 1204196 Query 288456 CTTGACGAATATCTGCAT 288473 ||| || || || ||||| Sbjct 1204195 CTTAACAAAGATTTGCAT 1204178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179601711473508