Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11] 3,486 sequences; 1,333,398,936 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1371 120 4e-22 >seq1371 Length=8752182 Score = 120 bits (132), Expect = 4e-22 Identities = 254/373 (68%), Gaps = 7/373 (2%) Strand=Plus/Plus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || ||||||||||| || | ||||| |||| ||||| || || || ||||||||| Sbjct 1700184 CAGGCAAAATCACAGTGAAGCCCTTCGTCTCGCGATATCAGCTCGTTCGAGAAGGTTAAT 1700243 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA-AAAGATCCAGAAAAGAA 37294 |||||||| || || | ||||| | ||| || | || ||| ||| |||||| ||||| Sbjct 1700244 CCTGGCATCAACCCACGCTTTTTGAGCCAGAAGA-TGGAGCAGAAACTTCCAGAGAAGAA 1700302 Query 37295 AATACCTTCAACTGCTGCAAATGCTACAAGACGTGT-ACCGAAAGTTGAACTATAATCAG 37353 ||| |||||||| ||||| || | | || | | | | || | | | | ||| Sbjct 1700303 AATCCCTTCAACACAAGCAAAAGCAATTA-ACCTCTCAGCAAACGATTCAGCACCATC-- 1700359 Query 37354 AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTT 37413 |||||| | |||||| ||||| |||||||| || ||||||||||| Sbjct 1700360 -AATCCAACGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGGATAGTTTCAATTGCAC 1700418 Query 37414 TTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473 || ||| | |||| | | |||| | || ||||| || | || | | |||| Sbjct 1700419 GAAAAAGATGGGTTTTAAGGTTAGAATCTTTGATGTAAGTTTCTAAAAGAAGAGAGTACA 1700478 Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 ||||||||||||| |||||||| || || || || ||||| ||| | |||||||| | Sbjct 1700479 TTTCAGAGTGAATGTTTTCAATGGCGATTTGGAAGCCATAGAAAGCGCGAGCTTCAGCAA 1700538 Query 37534 ATTGAACATCGTT 37546 ||||| || || Sbjct 1700539 CCTGAACCTCCTT 1700551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592290989795440