Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11]
3,486 sequences; 1,333,398,936 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq607 122 2e-22
seq863 120 5e-22
seq2390 118 2e-21
seq1776 114 2e-20
seq896 114 2e-20
seq2618 111 3e-19
seq3251 109 1e-18
seq2417 109 1e-18
seq2164 105 1e-17
seq1009 100 5e-16
seq2 98.7 2e-15
seq1716 96.9 6e-15
seq993 96.9 6e-15
seq374 87.8 3e-12
seq530 86.0 1e-11
>seq607
Length=2562756
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||| |||||||| || || |||| ||||| |||| ||| || ||| ||||||||
Sbjct 507479 ATACCTCCTCTCAAACGGAGAACCAAATGCAGAGTAGACTCCTTCTGAATGTTATAGTCT 507420
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| || | || || || || ||||| | ||||| || || ||
Sbjct 507419 GCAAGAGTCCGACCATCCTCAAGCTGCTTCCCTGCGAAAATAAGCCTCTGCTGGTCTGGT 507360
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||||||||| ||||| || || || | ||| ||| || ||||||| |||
Sbjct 507359 GGGATCCCTTCTTTATCCTGTATCTTTGTCTTCACATTCTCAATGGTGTCGGAAGTTTCA 507300
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || || || || ||||| || || || ||||| || |||||
Sbjct 507299 ACTTCCAAGGTAATCGTCTTGCCTGTAAGAGTCTTGACAAAGATCTGCAT 507250
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | || || |||| |||| || | || || || || || ||
Sbjct 507935 ATACCACCTCTGAGGCGGAGGACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATCA 507876
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || || ||| || | || || || ||||| || | ||||| || |||||
Sbjct 507875 GCCAAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGT 507816
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || |||||||| || || || || | ||| ||| ||||| || |||
Sbjct 507815 GGAATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCTGAGCTTTCA 507756
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || ||||| || || ||||| || ||||| ||||||||
Sbjct 507755 ACTTCTAGGGTGATGGTTTTCCCAGTAAGCGTCTTAACAAAGATTTGCAT 507706
>seq863
Length=2839217
Score = 120 bits (132), Expect = 5e-22
Identities = 168/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || ||||| | | ||||| |||| || | |||| ||| || || |||
Sbjct 2111645 ATTTGCATTCCACCACGAAGGCGAAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTA 2111586
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| | | |||| ||| || | | ||| || ||||| || | | ||| |||
Sbjct 2111585 TAGTCTGCAAGGGTTCGGCCATCCTCGAGCTATTTACCAGCAAAGATCAGACGCTGCTGA 2111526
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || ||||||||||||||||| |||||||| || | ||| ||| ||||| |||
Sbjct 2111525 TCTGGGGGAATTCCTTCTTTATCTTGAATTTTGGTCTTAACATTATCAATCGTATCAGAA 2111466
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| || || |||||||| | || || ||||| ||||| ||||| ||||||||
Sbjct 2111465 CTCTCGACCTCAAGAGTTATGGACTTGCCAGTTAGGGTTTTGACAAAAATTTGCAT 2111410
Score = 96.9 bits (106), Expect = 6e-15
Identities = 164/238 (69%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| |||||||| || ||||| || || ||||| | || | ||| || || ||
Sbjct 2111874 AATTTGCATACCACCCCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATGTT 2111815
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| || | | || | ||| || | || || || ||||| || || ||||| ||
Sbjct 2111814 GTAATCAGCAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTG 2111755
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || ||||||||||| || || || ||||| || | ||| | ||| || ||
Sbjct 2111754 ATCCGGGGGGATTCCTTCTTTGTCCTGAATCTTGGTCTTAACATTGTCGACAGTGTCAGA 2111695
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| || | || || ||||| ||||| | || |||||||| |||||||||
Sbjct 2111694 GCTTTCAACCTCCAAGGTAATTGTTTTTCCTGTCAAAGTCTTTACAAAGATTTGCATT 2111637
>seq2390
Length=8026821
Score = 118 bits (130), Expect = 2e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || ||||||| ||| || | ||| || | ||||||||||| ||||| | |
Sbjct 2843042 ATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCGAGCTGTTTTCCGGCGAAAATGAGACGT 2843101
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||| || || || ||||||||||| ||||| || |||| ||| | ||| || ||
Sbjct 2843102 TGTTGGTCTGGTGGGATTCCTTCTTTGTCTTGGATCTTGGCTTTGACATTGTCGATTGTG 2843161
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| || || || || ||||| ||||| |||||||| ||||| ||||| || || || |||
Sbjct 2843162 TCCGAGGATTCTACCTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGC 2843221
Query 193359 ATTTT 193363
|||||
Sbjct 2843222 ATTTT 2843226
>seq1776
Length=5111350
Score = 114 bits (126), Expect = 2e-20
Identities = 167/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || |||| ||| || || ||||| ||||| | || | ||| || ||| ||
Sbjct 1205097 ATTTGCATTCCACTTCTTAAACGGAGTACAAGATGGAGGGTTGACTCCTTCTGAATGTTG 1205038
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|| || | | || | ||| || | || ||||| ||||| || | |||||||||
Sbjct 1205037 TAATCAGCAAGGGTGCGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTGG 1204978
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
||||| || || ||||| |||||||| ||||||||||| | ||| ||| || ||||||
Sbjct 1204977 TCAGGGGGAATGCCTTCCTTATCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAA 1204918
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||| || || || ||||| || || || || || || ||||| || |||||
Sbjct 1204917 CTTTCAATCTCAAGGGTGATAGTCTTCCCGGTGAGGGTCTTCACAAAGATCTGCAT 1204862
Score = 111 bits (122), Expect = 3e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| ||||||||||| || || ||||| || || || || || |||||||| ||||| |||
Sbjct 1204551 TGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCTTTGTCTTGAATT 1204492
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|| ||||| | ||| |||||| || ||| ||||||||| || || ||||| || ||
Sbjct 1204491 TTTGTTTTGACATTATCAATAGTGTCAGAACTCTCAACTTCAAGGGTGATAGTCTTCCCG 1204432
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || ||||| || |||||
Sbjct 1204431 GTGAGGGTCTTAACAAAAATCTGCAT 1204406
Score = 102 bits (112), Expect = 1e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
||||| |||||||| || || ||||| || || || || || ||||| || ||||| |||
Sbjct 1204779 TGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCCTTGTCTTGGATT 1204720
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||||||| | ||| |||||| || || ||||| || || || ||||| || ||
Sbjct 1204719 TTGGTTTTAACATTATCAATAGTGTCAGAGCTTTCAACCTCAAGGGTGATAGTCTTCCCA 1204660
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || |||||||| || |||||
Sbjct 1204659 GTGAGGGTCTTTACAAAGATCTGCAT 1204634
Score = 89.7 bits (98), Expect = 9e-13
Identities = 162/237 (68%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || || ||||| || ||||| |||| || | ||||| ||| || |||||
Sbjct 1205325 ATTTGCATTCCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGGATATTG 1205266
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| | | || || ||| || | || || || ||||| || || || || |||
Sbjct 1205265 TAGTCAGCAAGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATCAACCTTTGCTGA 1205206
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || || || |||||||| || || | || | ||| ||| || || |||
Sbjct 1205205 TCTGGGGGAATGCCCTCCTTATCTTGAATCTTTGCCTTGACATTGTCAATGGTGTCTGAA 1205146
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||| || || | ||| || || || || || | || || || ||||||||||||
Sbjct 1205145 CTCTCGACCTCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAATATTTGCATT 1205089
Score = 84.2 bits (92), Expect = 4e-11
Identities = 114/158 (72%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || || || || || |||||||| || ||||| || || || || |||||||| ||
Sbjct 1205474 TCCTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTG 1205415
Query 193266 TCTTGTATTT--TGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTA 193323
|| ||||| | | || || | ||| |||||||| || |||||| || | || |
Sbjct 1205414 TCCTGTATATCTTAGTCTTGACATTATCGATAGTATCTGAGCTCTCAACCTCCAAGGTGA 1205355
Query 193324 TAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
| ||||| || || | || || |||||||||||||||
Sbjct 1205354 TGGTTTTCCCAGTCAAGGTCTTAACAAATATTTGCATT 1205317
>seq896
Length=2616551
Score = 114 bits (126), Expect = 2e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | ||||| || || || | || | ||| || || || |||||||
Sbjct 1343376 ACCACCACGAAGACGAAGAACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGC 1343317
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| || | ||| || | ||||||||||| || || | | ||||| || || ||
Sbjct 1343316 TAAAGTGCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGTTGTTGGTCGGGTGG 1343257
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| ||||| || |||| ||| | ||| || || || || || || ||
Sbjct 1343256 GATGCCTTCTTTGTCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCAGAGGATTCGAC 1343197
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|||||| ||||| |||||||| ||||| ||||| || || || ||||||||
Sbjct 1343196 TTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 1343146
>seq2618
Length=3490594
Score = 111 bits (122), Expect = 3e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | ||||| || || || | || | ||| || || || |||||||
Sbjct 3445128 ACCACCACGAAGACGAAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 3445187
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| || | ||| || | ||||||||||| || || | | ||||| || || ||
Sbjct 3445188 TAAAGTGCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGG 3445247
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| || || || |||| ||| | ||| || || ||||| || || ||
Sbjct 3445248 GATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAGGATTCGAC 3445307
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| ||||| |||||||| ||||| ||||| || || || ||||||||
Sbjct 3445308 CTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 3445358
>seq3251
Length=7052893
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||| || ||||| || || |||| ||||| |||| ||| || ||| ||||||||
Sbjct 3480936 ATACCTCCCCTCAAACGGAGGACCAAATGCAGAGTAGACTCCTTCTGAATGTTATAGTCT 3480995
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | ||| || | || || || |||||||| | ||||| || || ||
Sbjct 3480996 GCAAGAGTCCGGCCATCCTCAAGCTGCTTCCCAGCAAAAATAAGCCTCTGCTGGTCCGGT 3481055
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||||||||| || || || || || | ||| ||| || || |||| ||
Sbjct 3481056 GGGATCCCTTCTTTATCCTGGATCTTCGTCTTCACATTCTCAATGGTGTCAGAAGTTTCG 3481115
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | || || || || |||||||| || || ||||| || |||||
Sbjct 3481116 ACTTCCAAGGTGATCGTCTTGCCTGTTAGGGTCTTGACAAAGATCTGCAT 3481165
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | || || |||| |||| || | || || || || || ||
Sbjct 3480480 ATACCACCTCTGAGGCGGAGGACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATCA 3480539
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || || ||| || | || || || ||||| || | ||||| || |||||
Sbjct 3480540 GCCAAAGTCCTGCCATCCTCCAGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGT 3480599
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || |||||||| || || || || | ||| ||| ||||| || |||
Sbjct 3480600 GGAATGCCCTCCTTATCTTGAATCTTCGTCTTCACATTGTCAATTGTATCTGAGCTTTCA 3480659
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || ||||| || || || || || || || || |||||
Sbjct 3480660 ACTTCTAGGGTGATGGTTTTCCCAGTAAGAGTCTTAACGAAAATCTGCAT 3480709
>seq2417
Length=2538752
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| |||||||| | || || ||||| || | || | |||||| || || || ||
Sbjct 2309278 ATGCCACCTCTAAGACGGAGAACCAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCA 2309219
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | ||| || | |||||||||||||| ||||| ||||| || || ||
Sbjct 2309218 GCAAGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATTAACCTCTGCTGGTCTGGG 2309159
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||||||||| | ||| ||| ||||| || |||
Sbjct 2309158 GGAATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTGTCAATCGTATCAGAGCTTTCA 2309099
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || ||||| || || || || || || ||||| || |||||
Sbjct 2309098 ACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAGATCTGCAT 2309049
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| |||||||| | || || ||||| || | || | |||||| || || || ||
Sbjct 2309962 ATGCCACCTCTAAGACGGAGAACCAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCA 2309903
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | ||| || | |||||||||||||| || || ||||| || || ||
Sbjct 2309902 GCAAGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGG 2309843
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||||||||| | ||| ||| ||||| || |||
Sbjct 2309842 GGAATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTGTCAATCGTATCAGAGCTTTCA 2309783
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || ||||| || || || || || || ||||| || |||||
Sbjct 2309782 ACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTAACAAAGATCTGCAT 2309733
Score = 104 bits (114), Expect = 4e-17
Identities = 165/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| || |||||||| || || || || ||||| | || | ||| || ||| ||
Sbjct 2310197 AATTTGCATTCCACCTCTTAAACGGAGCACAAGATGGAGGGTTGACTCCTTCTGAATGTT 2310138
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
|| || | | || | ||| || | || ||||| ||||| || | |||||||||
Sbjct 2310137 GTAATCAGCAAGGGTACGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGTCTCTGTTG 2310078
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
|| || || || ||||| || ||||| ||||||||||| | ||| ||| || || ||
Sbjct 2310077 GTCTGGGGGAATGCCTTCCTTGTCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCAGA 2310018
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || ||||| || || || || || || ||||| || |||||
Sbjct 2310017 GCTTTCAACCTCAAGGGTGATAGTCTTCCCAGTGAGGGTCTTCACAAAAATCTGCAT 2309961
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| |||||||| | || || ||||| || | || | |||||| || || || ||
Sbjct 2309506 ATGCCACCTCTAAGACGGAGAACCAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAATCA 2309447
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | ||| || | |||||||||||||| || || ||||| || || ||
Sbjct 2309446 GCAAGAGTGCGGCCATCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGG 2309387
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| ||||||||||| | ||| ||| ||||| || |||
Sbjct 2309386 GGAATACCTTCCTTGTCTTGGATTTTGGTTTTAACATTGTCAATCGTATCAGAGCTTTCA 2309327
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || || || || || || ||||| || |||||
Sbjct 2309326 ACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTAACAAAGATCTGCAT 2309277
Score = 96.9 bits (106), Expect = 6e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || | ||| ||||| ||||| || || ||||| || || || || || ||||| ||
Sbjct 2308976 ATCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTT 2308917
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||||| ||||||||||| | ||| ||| || || ||| ||| || || || || ||
Sbjct 2308916 GTCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCAGAATTCTCGACCTCAAGGGTGAT 2308857
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| || || || || || || ||||| || |||||
Sbjct 2308856 AGTCTTCCCAGTGAGGGTCTTAACAAAAATCTGCAT 2308821
Score = 96.9 bits (106), Expect = 6e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || | ||| ||||| ||||| || |||||||| || || || || || ||||| ||
Sbjct 2309660 ATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGAATGCCTTCCTT 2309601
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||||| ||||||||||| | ||| ||| || ||||| ||||| || || || ||
Sbjct 2309600 GTCTTGAATTTTGGTTTTGACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGAT 2309541
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || ||||| || |||||
Sbjct 2309540 GGTCTTCCCAGTGAGGGTCTTAACAAAAATCTGCAT 2309505
Score = 93.3 bits (102), Expect = 8e-14
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || || || || || |||||||| || ||||| || |||||||| |||||||| ||
Sbjct 2310571 TCCTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTG 2310512
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| ||||| || || || | ||| ||||| || || ||| || || | || ||
Sbjct 2310511 TCCTGTATCTTAGTCTTGACATTATCGATAGTGTCTGAGCTCTCGACCTCCAAGGTGATG 2310452
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| || || | || || |||||||||||||||
Sbjct 2310451 GTTTTCCCAGTCAAGGTCTTAACAAATATTTGCATT 2310416
>seq2164
Length=10083965
Score = 105 bits (116), Expect = 1e-17
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||| || || |||| ||| || | ||| || | ||||||||||| || || | |
Sbjct 642597 AATGTTGTAATCGGCTAAAGTGCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACG 642538
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||||| || || || || |||||||| || || || |||| ||| | ||| || ||
Sbjct 642537 TTGTTGGTCTGGTGGGATGCCTTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGT 642478
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
|| || || || |||||||| ||||| |||||||| ||||| ||||| || || || ||
Sbjct 642477 GTCCGAGGATTCGACTTCTAGGGTTATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTG 642418
Query 193358 CATTTT 193363
||||||
Sbjct 642417 CATTTT 642412
>seq1009
Length=6422589
Score = 100 bits (110), Expect = 5e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| || | ||||| ||||| || | || | ||| || || || |||||||
Sbjct 510245 ACCACCCCTGAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 510186
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
| || | || || | ||||||||||| || || | | ||| || || |||||
Sbjct 510185 GAGAGTGCGGCCGTCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGG 510126
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || || || || | ||| || || || || || |||||
Sbjct 510125 GATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATGGTGTCTGAGGATTCAAC 510066
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| ||||| || ||||| ||||| || ||||| |||||
Sbjct 510065 CTCTAGGGTTATTGTTTTCCCAGTTAGGGTTTTCACGAATATCTGCAT 510018
>seq2
Length=8241039
Score = 98.7 bits (108), Expect = 2e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| |||||||| || || || | ||||||||| || | || |||||||| || || |||
Sbjct 3865255 TGCTTTCCGGCGAAGATGAAACGCTGTTGATCGGGTTGAATGCCTTCTTTGTCATGGATT 3865314
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|| | || | || ||| ||||| || ||||| || || || || ||||||||
Sbjct 3865315 TTAGCCTTGACGTTGTTAATGGTATCACTAGTTTCAACCTCAAGGGTGATGGTTTTACCC 3865374
Query 193335 GTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| || ||||| |||||||||||||||||
Sbjct 3865375 GTAAGAGTTTTCACAAATATTTGCATTTT 3865403
>seq1716
Length=4871073
Score = 96.9 bits (106), Expect = 6e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|||||||| || || || | | ||| ||||| || || || || ||||||||||| |||
Sbjct 2426723 TGTTTTCCAGCGAAGATCAGACGCTGCTGATCTGGGGGAATCCCCTCTTTATCTTGAATT 2426782
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
||||| || | ||| ||| ||||| ||| ||| || || ||||| || | || ||
Sbjct 2426783 TTGGTCTTAACATTATCAATCGTATCAGAACTCTCGACCTCGAGAGTGATGGACTTGCCA 2426842
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| ||||| | ||||||
Sbjct 2426843 GTTAGGGTTTTGACAAAAACTTGCAT 2426868
>seq993
Length=2602326
Score = 96.9 bits (106), Expect = 6e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| || | ||||| ||||| || | || | ||| || || || |||||||
Sbjct 374647 ACCACCCCTGAGACGAAGCACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 374588
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
| || | || || | ||||||||||| || || | | ||| || || || ||
Sbjct 374587 GAGTGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAATATCAGACGCTGCTGGTCTGGGGG 374528
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || || || || | ||| || || || || || |||||
Sbjct 374527 AATGCCTTCCTTGTCTTGGATCTTAGTCTTCACATTGTCGATCGTGTCTGAGGATTCAAC 374468
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| ||||| ||||| || ||||| ||||| || ||||| ||||| ||
Sbjct 374467 CTCTAGGGTTATGGTTTTCCCGGTTAGGGTTTTCACGAATATCTGCATCTT 374417
>seq374
Length=4160932
Score = 87.8 bits (96), Expect = 3e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | || || |||| ||| | ||| | ||| || || || |||||
Sbjct 3965744 ATACCACCACGAAGACGGAGCACCAAATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCA 3965685
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | ||| || | || |||||||| || || || ||||| || || ||
Sbjct 3965684 GCAAGGGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGG 3965625
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || || ||||| || || | || | ||| |||||||||||| |||
Sbjct 3965624 GGAATACCCTCCTTGTCTTGAATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCG 3965565
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| || || || || || || || || || || ||||| |||||||||
Sbjct 3965564 ACTTCGAGGGTGATGGTCTTCCCAGTGAGAGTCTTGACAAAGATTTGCATT 3965514
Score = 86.0 bits (94), Expect = 1e-11
Identities = 121/168 (72%), Gaps = 3/168 (2%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
||||||||||| || || | || || || || || || |||||||| || ||||| ||
Sbjct 3965204 TGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATC 3965145
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|| || || | ||| ||| || |||||| ||| || || ||||| || || || ||
Sbjct 3965144 TTAGTCTTGACATTGTCAATGGTGTCGGAACTCTCGACCTCGAGAGTGATGGTCTTTCCA 3965085
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT-TTTATTAGTA--AAATAATTA 193379
|| || || || || || |||||||| | ||| | | |||||||||
Sbjct 3965084 GTAAGGGTCTTCACGAAGATTTGCATCTGTATAATCAATAAATAATTA 3965037
>seq530
Length=4616287
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| |||| ||||||||||| || || | || || || || || || || ||||| ||
Sbjct 1166822 TCCTCTAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATCCCTTCCTTG 1166881
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || || || || | ||| ||| || |||||| ||| || || ||||| |||
Sbjct 1166882 TCTTGGATCTTAGTCTTGACATTGTCAATGGTGTCGGAACTCTCGACCTCGAGAGTGATA 1166941
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || || || ||||||||
Sbjct 1166942 GTCTTTCCAGTAAGGGTCTTAACGAAGATTTGCAT 1166976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899615197559520
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |