Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11] 3,486 sequences; 1,333,398,936 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq1717 84.2 2e-11 >seq1717 Length=9716283 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155 ||| ||||| ||||| || ||||| | || || |||||||| ||| | || ||| | Sbjct 1668750 AAATATGCAGATTTTCGTGAAAACCCTAACTGGAAAAACCATAACCTTAGAGGTCGAATC 1668691 Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215 ||| | | | | | || ||| || || |||||||||||| | || || Sbjct 1668690 ATCCGACACAATCGACAATGTCAAAATCAAGATCCAAGACAAAGAAGGCATCCCACCAGA 1668631 Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111275 ||||||| | | || | ||| || ||||||||||||||| | ||| | || ||||| Sbjct 1668630 TCAACAACGCTTAATCTTTGCTGGGAAACAATTGGAAGATGGAAGAACACTTGCAGATTA 1668571 Query 111276 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || ||||| || || ||||| ||| | || || || || || Sbjct 1668570 CAACATTCAGAAGGAATCGACGCTTCATTTGGTGCTTCGACTTCGTGGGGG 1668520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421793279087536