Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11]
3,486 sequences; 1,333,398,936 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq1717 84.2 2e-11
>seq1717
Length=9716283
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155
||| ||||| ||||| || ||||| | || || |||||||| ||| | || ||| |
Sbjct 1668750 AAATATGCAGATTTTCGTGAAAACCCTAACTGGAAAAACCATAACCTTAGAGGTCGAATC 1668691
Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215
||| | | | | | || ||| || || |||||||||||| | || ||
Sbjct 1668690 ATCCGACACAATCGACAATGTCAAAATCAAGATCCAAGACAAAGAAGGCATCCCACCAGA 1668631
Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111275
||||||| | | || | ||| || ||||||||||||||| | ||| | || |||||
Sbjct 1668630 TCAACAACGCTTAATCTTTGCTGGGAAACAATTGGAAGATGGAAGAACACTTGCAGATTA 1668571
Query 111276 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| || || || ||||| || || ||||| ||| | || || || || ||
Sbjct 1668570 CAACATTCAGAAGGAATCGACGCTTCATTTGGTGCTTCGACTTCGTGGGGG 1668520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421793279087536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |