Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq20 102 8e-17
>seq20
Length=765589
Score = 102 bits (112), Expect = 8e-17
Identities = 208/303 (69%), Gaps = 7/303 (2%)
Strand=Plus/Minus
Query 17257 GTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTA-AAAGCATCGGGCTT 17315
||||||||| ||||| ||||| || ||||| || || || || || ||||| || ||||
Sbjct 521881 GTACATTTCAGAGTGAATGTTTTCAATGGCGATTTGGAAGCCATAGAAAGCG-CGAGCTT 521823
Query 17316 CCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGC 17375
| || | ||||| ||| ||||| | | || ||||| ||| |||||||||||
Sbjct 521822 CAGCAACCTGAACCTCCTTCATGAATCTTCCGGCGAGATTCTCGAGAACGATGCCGTCTG 521763
Query 17376 TCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTG--TAAGAAC 17433
|||||||| || || | || || | ||||||| | ||||| ||||| |||||
Sbjct 521762 ATGCGGCGAAGAAGGCGAGGATGTGGGTGATGAAATGCTGTTCGT-CGGTGGTTAAGATG 521704
Query 17434 G--CGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCC 17491
| ||||| | ||||| || | ||| |||||||||| ||||| || |||
Sbjct 521703 GTTTCCCAGTGACGAACATCTTGCGAAAGATCGACTTCTTCGGCAGTCCAGAATGAAGCT 521644
Query 17492 ACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATCTA 17551
| || ||||| ||||| | ||| || | ||||| || ||||| | | |||||
Sbjct 521643 TCAGCTTTTTTGTACATTTCCCAGATTTGTGGGTATTCAATTGGGAACATACAGAATCTA 521584
Query 17552 TCT 17554
|||
Sbjct 521583 TCT 521581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517473156554640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |