Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 125 6e-24
seq355 122 8e-23
seq319 122 8e-23
seq2834 113 4e-20
seq1427 113 4e-20
seq1360 109 5e-19
seq51 105 6e-18
seq338 100 2e-16
seq843 86.0 5e-12
>seq6
Length=1196388
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| | ||||| | ||| | |||| || || || || || || ||||||||
Sbjct 29246 TACCTCCCCTTAATCGGAGCACAAGATGGAGGGTTGATTCCTTCTGGATATTGTAATCAG 29305
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| ||| |||||||||||| || ||||| |||| | | ||||||||| || |
Sbjct 29306 CAAGAGTACGCCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGG 29365
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || |||||||||||| |||||| ||||| | || | ||||| | |||||| |
Sbjct 29366 GGATTCCCTCCTTGTCTTGAATTTTGGTCTTAACATTGTCAATAGTGTCGGAGCTCTCAA 29425
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || || |||| ||| || |||||||| |||||
Sbjct 29426 CCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 29474
Score = 120 bits (132), Expect = 3e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || ||||| || || || |||||||| | ||| ||| ||||||||
Sbjct 29039 CAAGATGGAGGGTTGACTCCTTCTGGATATTGTAATCAGCAAGAGTACGCCCATCCTCGA 29098
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || ||||| |||| | | ||||||||| || || || |||||||||||| ||
Sbjct 29099 GCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATTCCCTCCTTGTCTTGAA 29158
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
|||| ||||| | || | ||||| | |||||| ||||| | || | || || |
Sbjct 29159 TTTTGGTCTTAACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAAAGTAATAGTCTTCC 29218
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | |||||| |||||||| |||||
Sbjct 29219 CTGTTAAAGTTTTCACAAAAATTTGCAT 29246
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||| | ||| | |||| || ||||| || || |||||||||||
Sbjct 29702 TACCACCCCTTAATCGGAGCACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAG 29761
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || |||||||||||| || ||||| |||| | | ||||||||| || |
Sbjct 29762 CAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGG 29821
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || ||||| ||| || ||||| | ||||| ||||| | ||| || |
Sbjct 29822 GGATTCCTTCTTTGTCCTGAATCTTGGTCTTAACATTGTCGACAGTGTCAGAGCTTTCAA 29881
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | ||| | ||||| || |||| ||| |||||||| || |||||
Sbjct 29882 CCTCCAAGGTAATTGTTTTTCCTGTCAAAGTCTTTACAAAGATTTGCAT 29930
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| |||||||| || || ||||| || || | || || ||||||
Sbjct 29949 CACCAAGTGGAGAGTAGACTCCTTCTGGATGTTATAGTCTGCAAGGGTTCGGCCATCCTC 30008
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||||||| ||||| |||| |||||||||||||| || || || || || || |||
Sbjct 30009 GAGCTGTTTACCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATTCCTTCTTTATCTTG 30068
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|||||| || || | || | || || | ||||||||||| | || | | ||
Sbjct 30069 AATTTTGGTCTTCACATTATCAATCGTATCAGAACTCTCGACCTCAAGAGTTATGGACTT 30128
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| || || ||||| |||||||| |||||
Sbjct 30129 GCCAGTTAGGGTTTTGACAAAAATTTGCAT 30158
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || || ||||| ||||| ||||| || || ||||| ||||||||| ||
Sbjct 28359 GTGGAGGGTGGATTCTTTCTGAATATTGTAGTCAGCCAAGGTGCGTCCATCCTCGAGTTG 28418
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || || |||| || | |||||| || || || || |||||||| || |||||
Sbjct 28419 CTTCCCTGCAAAGATTAGTCTCTGCTGGTCCGGGGGAATCCCCTCCTTATCCTGGATTTT 28478
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||| || | ||||| || || | |||||| ||||| | ||| | || || || ||
Sbjct 28479 AGTTTTCACATTATCGACAGTATCTGAGCTCTCAACCTCCAGGGTGATGGTCTTCCCAGT 28538
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| ||| || ||||||||||||||
Sbjct 28539 CAAAGTCTTGACAAAAATCTGCAT 28562
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | |||||||| ||||| || |||||||| | || | | ||||||
Sbjct 28581 CACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAATCTGCAAGGGTCCTCCCATCCTC 28640
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647
||||| || || ||| | || | | ||||||||| || || ||||||||||||| |||
Sbjct 28641 AAGCTGCTTCCCGGCGAAAATCAACCTCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTG 28700
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
| || | ||| || | || | ||||| | |||||| ||||| | || | || |
Sbjct 28701 GATCTTAGTCTTT-ACATTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTCT 28759
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || |||| || || ||||||||||||||
Sbjct 28760 TCCCTGTCAAGGTCTTAACAAAAATCTGCAT 28790
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || | ||||| | || | |||| || ||||| || || |||||||||||
Sbjct 29474 TACCACCCCTTAATCGGAGAACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAG 29533
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || |||||||||||| || ||||| |||| | | ||||||||| || |
Sbjct 29534 CAAGAGTACGTCCATCCTCGAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGG 29593
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||| ||||| ||| || ||||| | || | ||||| | |||||| |
Sbjct 29594 GAATTCCCTCTTTGTCCTGAATCTTAGTCTTAACATTGTCAATAGTGTCTGAGCTCTCAA 29653
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || || |||| ||| || |||||||| |||||
Sbjct 29654 CCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTCACAAAAATTTGCAT 29702
>seq355
Length=215899
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || ||||| || || ||||||||||| | |||||| ||||||
Sbjct 204820 ACCAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGAGTGCGGCCATCCTCA 204761
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||||||||| || |||| | | |||||| || || || || || |||||||||
Sbjct 204760 AGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGG 204701
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| |||||| | || | ||||| | ||| || ||||| | ||| | || ||
Sbjct 204700 ATTTTGGTTTTAACATTATCAATAGTGTCAGAGCTTTCAACCTCAAGGGTGATAGTCTTC 204641
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || |||||||| |||||||||
Sbjct 204640 CCAGTGAGGGTCTTTACAAAGATCTGCATG 204611
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || || ||||| ||||| ||||| || | || | |||||| |||||
Sbjct 204359 GTGGAGGGTCGATTCTTTCTGAATATTGTAGTCAGCGAGCGTTCTGCCATCCTCCAGCTG 204300
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|||||||| |||| ||||||||||| || || || || |||||||| ||| ||| ||
Sbjct 204299 CTTTCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATTCCCTCCTTATCTTGAATCTT 204240
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||||| | |||| |||||| ||||| ||||||| || | ||||| |||||
Sbjct 204239 CGTCTTAACATTGTCGATGGTGTCAAAACTCTCAACCTCGAGAGTTATGGTTTTTCCGGT 204180
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||||| || ||||| || |||||
Sbjct 204179 AAGAGTCTTAACAAAGATTTGCAT 204156
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| | ||| | | ||||||||| | ||||||||| ||||| || ||||| ||
Sbjct 205294 CCTCCTCTTAAACGAAGCACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCA 205235
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || | | |||||||||||| || || || |||| | | |||||||| || ||
Sbjct 205234 AGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATTAACCTTTGCTGATCTGGGGGA 205175
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
||||||||||| ||| ||| ||| || || | || | |||||| | |||||||||
Sbjct 205174 ATGCCCTCCTTATCTTGAATCTTTGCCTTGACATTGTCAATGGTGTCTGAACTCTCGACC 205115
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | ||| || || |||| ||| || || || || |||||
Sbjct 205114 TCCAAAGTGATCGTCTTCCCAGTCAAAGTCTTGACGAATATTTGCAT 205068
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| ||| ||||| || || ||||||||||| | ||||| ||| || |||||
Sbjct 204587 GTGGAGTGTCGACTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCATCTTCAAGCTG 204528
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| || |||| | | |||||| || || || || || ||||||||| ||||||
Sbjct 204527 CTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTT 204468
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
| ||| || | || | ||||| | ||||| || || | ||| | || || |||||
Sbjct 204467 TGTTTTGACGTTATCAATAGTGTCAGAACTCTCAACTTCAAGGGTGATAGTCTTCCCGGT 204408
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||||||||||||
Sbjct 204407 GAGGGTCTTAACAAAAATCTGCAT 204384
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || || ||||||||||| || || ||||||| |||||| | ||| || |||
Sbjct 205492 GTGGATTCCTTCTGAATGTTGTAGTCTGCCAAAGTGCGCCCATCCTCCAACTGCTTACCA 205433
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-T 118659
|| | || | | |||||| || || || || || ||||||| ||||| | || || |
Sbjct 205432 GCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTTGTCCTGTA--TCTTAGTCT 205375
Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAG 118719
| || | |||| || || | |||||| ||||| | ||| | ||||| || |||| |
Sbjct 205374 TGACATTATCGATAGTATCTGAGCTCTCAACCTCCAAGGTGATGGTTTTCCCAGTCAAGG 205315
Query 118720 TTTTTACAAAAATCTGCAT 118738
|||| ||||| || |||||
Sbjct 205314 TTTTAACAAATATTTGCAT 205296
>seq319
Length=213347
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | |||||||| || || |||||||| ||| | |||||| ||||||
Sbjct 180751 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGGCCATCCTC 180692
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| ||||| ||| |||| | | |||||| || || || || ||||||||||||
Sbjct 180691 AAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTG 180632
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | ||| || | ||||||||| || | ||| | || ||
Sbjct 180631 AATCTTAGCCTTGACATTGTCAATGGTATCGGAGCTCTCGACTTCAAGGGTAATGGTCTT 180572
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || ||||| || |||||
Sbjct 180571 CCCTGTGAGAGTCTTCACAAAGATTTGCAT 180542
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || ||||| || || |||||||| ||| | || || ||||||
Sbjct 180523 CACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTC 180464
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| ||||| || ||||||| | ||||| || || || || || |||||||||
Sbjct 180463 GAGCTGCTTTCCGGCAAAGATGAGCCTTTGCTGGTCTGGGGGGATTCCTTCCTTGTCTTG 180404
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|||||| || || | || | |||||| | ||| ||||| |||| ||| | || ||
Sbjct 180403 AATTTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCGACTTCGAGGGTGATTGTCTT 180344
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||| ||||||||
Sbjct 180343 TCCTGTTAGGGTTTTGACAAAGATCTGCAT 180314
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| |||| || ||||| || || |||||||| || || ||| || ||||||
Sbjct 180979 CACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCCTC 180920
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || |||||| | || | | |||||| || || || || || ||||||||
Sbjct 180919 GAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGGATACCTTCCTTGTCCTG 180860
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || ||||| | || | |||||| | |||||| ||||| | || | || ||
Sbjct 180859 AATCTTGGTCTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTAATGGTCTT 180800
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || || ||||||||
Sbjct 180799 CCCAGTAAGAGTCTTGACGAATATCTGCAT 180770
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || |||||||||||||| | || ||| |||||| ||||| || |||
Sbjct 181422 GTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCAAGCTGCTTACCA 181363
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | | |||||| || || || || ||||||||||| || || ||
Sbjct 181362 GCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCCTCCTTGTCCTGGATCTTAGCCTTC 181303
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||||| |||||| ||||| | || | || ||||| |||| ||
Sbjct 181302 ACATTATCAATAGTGTCCGAGCTCTCAACCTCCAAAGTGATGGTCTTGCCAGTCAAGGTC 181243
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 181242 TTCACAAAAATCTGCAT 181226
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || || |||||||| | ||| | ||| ||
Sbjct 181207 CACCAAGTGAAGGGTTGACTCCTTCTGGATATTGTAATCCGCAAGAGTCCTTCCATCTTC 181148
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || || | || | | |||||| || || || ||||| ||||||||
Sbjct 181147 CAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTG 181088
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | |||||||| |||||| ||||||| ||| | || ||
Sbjct 181087 AATCTTCGCCTTGACATTGTCAATGGTGTCCGAGCTCTCAACCTCGAGGGTGATGGTCTT 181028
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| || || || |||||||||||
Sbjct 181027 TCCGGTCAAGGTCTTGACGAAAATCTGCAT 180998
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-GCTCATAGTGCGCGTATCCT 118587
||| | ||| | || ||||| |||||||||||||| || ||| | || || ||||
Sbjct 180295 CACAAGGTGAAGAGTTGACTCCTTTTGAATGTTGTAGTCAGCT-AGGGTTCGGCCGTCCT 180237
Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
| ||||||||||| ||| |||| || | ||||| || || || || || |||||||||
Sbjct 180236 CTAGCTGTTTTCCGGCGAAGATCAGCCTTTGCTGGTCTGGGGGAATCCCTTCCTTGTCTT 180177
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
|| || || || | || | |||||| | ||||||||||||| || | || |
Sbjct 180176 GGATCTTAGTCTTGACATTGTCAATGGTGTCGGAACTCTCGACCTCGAGAGTGATGGTCT 180117
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || || || || |||||
Sbjct 180116 TTCCAGTAAGGGTCTTAACGAAGATTTGCAT 180086
>seq2834
Length=64598
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | |||||| ||| ||||||||||||||
Sbjct 904 GTTGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCGAGCTGTTTTCCG 845
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| ||||||| || || || ||||| || ||||| || |||||| || || |||
Sbjct 844 GCGAAGATGAGGCGTTGTTGGTCGGGTGGGATGCCTTCTTTGTCTTGGATCTTGGCTTTC 785
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | | ||||| || | ||| | ||||| || || || |||
Sbjct 784 ACATTGTCGATTGTGTCAGAGGATTCGACTTCTAGGGTTATGGTTTTACCCGTTAGGGTT 725
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 724 TTCACGAAGATCTGCAT 708
>seq1427
Length=108667
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | |||||| ||| ||||||||||||||
Sbjct 17797 GTGGACTCCTTCTGGATGTTGTAGTCGGCTAAAGTGCGGCCATCTTCGAGCTGTTTTCCG 17738
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||||||||| || || || || || ||||| || ||||| || || |||
Sbjct 17737 GCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTCCTGGATCTTGGCTTTG 17678
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| || | | |||||||| | ||| | ||||| || || || |||
Sbjct 17677 ACATTGTCGATGGTATCGGAGGATTCGACCTCTAGGGTTATGGTTTTACCCGTTAGGGTT 17618
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 17617 TTCACGAAGATCTGCAT 17601
>seq1360
Length=99280
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||| | || ||||| || || |||||||| ||| | || || || ||
Sbjct 35107 CACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTCCGGCCGTCTTC 35166
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||||||| ||| | || ||||||||||| || || || ||||| |||||||||
Sbjct 35167 GAGCTGTTTTCCGGCGAATATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTG 35226
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| ||||| | | || ||||| | ||| | |||||
Sbjct 35227 GATCTTAGTCTTCACATTGTCGATCGTGTCTGAGGATTCAACCTCTAGGGTTATGGTTTT 35286
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || ||||| || || ||||||||
Sbjct 35287 CCCGGTTAGGGTTTTCACGAATATCTGCAT 35316
>seq51
Length=574565
Score = 105 bits (116), Expect = 6e-18
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| |||||||| ||||||||||||||||| || || || |||||| |
Sbjct 464602 CAAGATGGAGGGTAGACTCCTTTTGAATGTTGTAATCAGCCAAGGTTCGACCATCCTCCA 464543
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|| || ||||| ||||||| | |||||| || || || || ||||||||||| ||
Sbjct 464542 ATTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGAA 464483
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | || | || || | |||| ||||||| ||| | || || |
Sbjct 464482 TCTTAGTCTTCACATTCTCAATTGTATCAGAAGTCTCAACCTCGAGGGTGATAGTCTTCC 464423
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || || || ||||| ||||||||
Sbjct 464422 CGGTGAGGGTCTTCACAAAGATCTGCAT 464395
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| | || | | ||||| ||| | ||||| || || ||||| ||||||||
Sbjct 464167 TACCTCCCCTCAACCGAAGCACCAGGTGCAAAGTAGATTCCTTCTGAATATTGTAATCAG 464108
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| || | ||| || | ||| || || || |||| || | |||||| || || |
Sbjct 464107 CCAATGTCCTTCCATCATCCAACTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGTG 464048
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| ||| ||| ||||| | |||| ||||| | ||| || |
Sbjct 464047 GAATTCCCTCCTTGTCCTGAATCTTTGTCTTAACGTTATCGATAGTGTCAGAGCTTTCAA 463988
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | ||| | ||||| || || ||||| || || |||||||||||
Sbjct 463987 CTTCCAGGGTGATGGTTTTTCCAGTGAGAGTCTTCACGAAAATCTGCAT 463939
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || || || ||||| ||||||||||| || ||| | ||||||
Sbjct 464375 ACCAAGTGCAGGGTTGATTCCTTTTGGATGTTGTAATCAGCCAAAGTCCTGCCATCCTCC 464316
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| |||| | | |||||| || || || ||||||||||| ||| |
Sbjct 464315 AGCTGCTTCCCAGCAAAGATAATCCTCTGCTGGTCAGGTGGAATGCCCTCCTTATCTTGA 464256
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | || || | ||| || || || | ||| | |||||
Sbjct 464255 ATCTTCGTCTTCACATTGTCAATTGTATCTGAGCTTTCAACTTCTAGGGTGATGGTTTTC 464196
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || || |||||||||||
Sbjct 464195 CCAGTAAGAGTCTTAACGAAAATCTGCAT 464167
>seq338
Length=211836
Score = 100 bits (110), Expect = 2e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608
|||| || |||||||||||| | ||| || | || || || || ||||| ||| |||
Sbjct 171299 CTTTCTGGATGTTGTAATCGGCTAGAGTACGGTTGTCTTCAAGTTGCTTTCCGGCGAAGA 171358
Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668
|||| ||||| |||||||| | ||||| || ||||| |||||| || || | |
Sbjct 171359 TGAGGCGCTGTTGATCGGGTTGAATGCCTTCTTTGTCATGAATTTTAGCCTTGACATTGT 171418
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
|| |||||| | || ||||| | ||| | ||||| || || |||||||| ||||
Sbjct 171419 TGATGGTGTCACTAGATTCAACCTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTCACAA 171478
Query 118729 AAATCTGCAT 118738
| || |||||
Sbjct 171479 ATATTTGCAT 171488
>seq843
Length=130910
Score = 86.0 bits (94), Expect = 5e-12
Identities = 162/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | || | ||||| || | || || || || ||||||||||||||
Sbjct 120358 TACCCCCACGAAGTCGAAGCACCAGATGAAGCGTCGATTCCTTCTGAATGTTGTAATCTG 120299
Query 118570 TCATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627
|| |||| | | ||| || | ||||| ||||| |||| | || || ||||| ||
Sbjct 120298 -CA-AGTGTTCTTCCATCTTCCAATTGTTTCCCAGCAAAGATTAAGCGTTGTTGATCTGG 120241
Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCT 118686
|| ||||| || |||||| || || ||| || | |||| ||||||| || | |
Sbjct 120240 TGGGATGCCTTCTTTGTCTTGGATCTTGGTTTTGACATTGTCGATTGTGTCCGATGAT-T 120182
Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || | ||| | ||||| || || || ||||| || |||||||||||
Sbjct 120181 CGACTTCTAGGGTTATGGTTTTCCCAGTTAGGGTTTTCACGAAAATCTGCAT 120130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433771192725016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |