Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18]
11,198 sequences; 536,949,264 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq63 109 1e-18
>seq63
Length=488123
Score = 109 bits (120), Expect = 1e-18
Identities = 169/239 (71%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 248783 TGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGC 248842
||||| | | ||| ||| | || || || || || |||||||||| ||||||||| |
Sbjct 277366 TGGACAGTGAGATAATCTATGACAGGGACTTTGACTATGATTTCTTTGGTTTCAAAACCC 277307
Query 248843 TGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGT 248902
| |||| ||| |||||||| || || | || | | | ||||| || |||||||||
Sbjct 277306 TCGAGAGATCATATCTCCTGAAGGTTCAAGGGACGGTTGTGGAGAGACCGCAGCACATGC 277247
Query 248903 TGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGC-TCGAGACGTAC 248961
||||| | || ||||| ||||| ||||||||||| || || | || | || ||||||||
Sbjct 277246 TGATGAGGGTTGCTGTTGGGATCCACAAGGATGATATCGA-ATCGGCCATCAAGACGTAC 277188
Query 248962 ACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTAC 249020
| ||| || | ||| | || || || | || || |||||||| || || ||
Sbjct 277187 CACTTGATGTCCCAAAGGTGGTTCACCCACGCTTCTCCAACTCTCTTCAATGCGGGCAC 277129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073612342036864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |